BLASTX nr result

ID: Coptis25_contig00002915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002915
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF02837.1|AC009894_8 elongation factor EF-2 [Arabidopsis tha...    78   4e-17
ref|XP_004143180.1| PREDICTED: elongation factor 2-like [Cucumis...    78   4e-17
ref|NP_849818.1| elongation factor EF-2 [Arabidopsis thaliana] g...    78   4e-17
gb|AFK64817.1| translation elongation factor 2 [Prunus persica]        78   4e-17
gb|AET97562.1| elongation factor [Ziziphus jujuba]                     78   4e-17

>gb|AAF02837.1|AC009894_8 elongation factor EF-2 [Arabidopsis thaliana]
          Length = 846

 Score = 78.2 bits (191), Expect(2) = 4e-17
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -3

Query: 231 LFVVECIEGVGVQTETVLGQALGEKIRPVLTVNKMDRCFLELQV 100
           L VV+CIEGV VQTETVL QALGE+IRPVLTVNKMDRCFLELQV
Sbjct: 129 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV 172



 Score = 34.7 bits (78), Expect(2) = 4e-17
 Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = -1

Query: 92  EIPSSPHVMVYPEKGTVAFSD-------FATNFAKMY 3
           E P    V VYPEKGTVAFS          TNFAKMY
Sbjct: 196 EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMY 232


>ref|XP_004143180.1| PREDICTED: elongation factor 2-like [Cucumis sativus]
          Length = 843

 Score = 78.2 bits (191), Expect(2) = 4e-17
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -3

Query: 231 LFVVECIEGVGVQTETVLGQALGEKIRPVLTVNKMDRCFLELQV 100
           L VV+CIEGV VQTETVL QALGE+IRPVLTVNKMDRCFLELQV
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV 169



 Score = 34.7 bits (78), Expect(2) = 4e-17
 Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = -1

Query: 92  EIPSSPHVMVYPEKGTVAFSD-------FATNFAKMY 3
           E P    V VYPEKGTVAFS          TNFAKMY
Sbjct: 193 EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMY 229


>ref|NP_849818.1| elongation factor EF-2 [Arabidopsis thaliana]
           gi|13605865|gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13
           [Arabidopsis thaliana] gi|15450763|gb|AAK96653.1|
           elongation factor EF-2 [Arabidopsis thaliana]
           gi|23397045|gb|AAN31808.1| putative elongation factor
           [Arabidopsis thaliana] gi|23397162|gb|AAN31864.1|
           putative elongation factor [Arabidopsis thaliana]
           gi|27363422|gb|AAO11630.1| At1g56070/T6H22_13
           [Arabidopsis thaliana] gi|332195217|gb|AEE33338.1|
           elongation factor EF-2 [Arabidopsis thaliana]
          Length = 843

 Score = 78.2 bits (191), Expect(2) = 4e-17
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -3

Query: 231 LFVVECIEGVGVQTETVLGQALGEKIRPVLTVNKMDRCFLELQV 100
           L VV+CIEGV VQTETVL QALGE+IRPVLTVNKMDRCFLELQV
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV 169



 Score = 34.7 bits (78), Expect(2) = 4e-17
 Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = -1

Query: 92  EIPSSPHVMVYPEKGTVAFSD-------FATNFAKMY 3
           E P    V VYPEKGTVAFS          TNFAKMY
Sbjct: 193 EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMY 229


>gb|AFK64817.1| translation elongation factor 2 [Prunus persica]
          Length = 843

 Score = 78.2 bits (191), Expect(2) = 4e-17
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -3

Query: 231 LFVVECIEGVGVQTETVLGQALGEKIRPVLTVNKMDRCFLELQV 100
           L VV+CIEGV VQTETVL QALGE+IRPVLTVNKMDRCFLELQV
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV 169



 Score = 34.7 bits (78), Expect(2) = 4e-17
 Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = -1

Query: 92  EIPSSPHVMVYPEKGTVAFSD-------FATNFAKMY 3
           E P    V VYPEKGTVAFS          TNFAKMY
Sbjct: 193 EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMY 229


>gb|AET97562.1| elongation factor [Ziziphus jujuba]
          Length = 843

 Score = 78.2 bits (191), Expect(2) = 4e-17
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -3

Query: 231 LFVVECIEGVGVQTETVLGQALGEKIRPVLTVNKMDRCFLELQV 100
           L VV+CIEGV VQTETVL QALGE+IRPVLTVNKMDRCFLELQV
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV 169



 Score = 34.7 bits (78), Expect(2) = 4e-17
 Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = -1

Query: 92  EIPSSPHVMVYPEKGTVAFSD-------FATNFAKMY 3
           E P    V VYPEKGTVAFS          TNFAKMY
Sbjct: 193 EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMY 229


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