BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002911
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36518.3| unnamed protein product [Vitis vinifera]              221   2e-55
emb|CBI38929.3| unnamed protein product [Vitis vinifera]              218   1e-54
ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ...   217   3e-54
ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is...   214   2e-53
dbj|BAC82908.1| putative ribosomal protein S12 [Oryza sativa Jap...   214   2e-53

>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  221 bits (562), Expect = 2e-55
 Identities = 109/144 (75%), Positives = 125/144 (86%)
 Frame = -2

Query: 688 TWKKMSGEEGVPAETAAAPVLGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAA 509
           T +KMSG+E V  E AAAP LGE +D+MTALQLVL+KSLAH GL RG+HEGAKVIEKHAA
Sbjct: 34  TLRKMSGDEAVVVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAA 93

Query: 508 QLCVIAEDCNQPDFVKLVRALCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKXXXXX 329
           QLCV+AEDCNQPD++KLV+ALCAD+NVSLI+VPSAKTLGEWAGLCKIDSEGKARK     
Sbjct: 94  QLCVLAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCS 153

Query: 328 XXXVKDYGEESEGLNIVQEYCKSH 257
              VKDYGEE+ GL+IVQE+ KS+
Sbjct: 154 CVVVKDYGEETPGLHIVQEHVKSN 177


>emb|CBI38929.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  218 bits (555), Expect = 1e-54
 Identities = 112/144 (77%), Positives = 125/144 (86%), Gaps = 2/144 (1%)
 Frame = -2

Query: 682 KKMSGEEGVPA-ETAA-APVLGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAA 509
           KKMSGEE V A ET+A AP LGEPMD+MTALQLVL+KSLAH GLARG+HEGAKVIEKHAA
Sbjct: 85  KKMSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAA 144

Query: 508 QLCVIAEDCNQPDFVKLVRALCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKXXXXX 329
            LCV+AEDCNQPD+VKLV+ALCAD+NVSLI VPSAKTLGEWAGLCKIDSEGKARK     
Sbjct: 145 HLCVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCS 204

Query: 328 XXXVKDYGEESEGLNIVQEYCKSH 257
              VKD+GEE+E +N+VQ+  KSH
Sbjct: 205 CVVVKDFGEETEAMNVVQQQVKSH 228


>ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 140

 Score =  217 bits (552), Expect = 3e-54
 Identities = 107/140 (76%), Positives = 122/140 (87%)
 Frame = -2

Query: 676 MSGEEGVPAETAAAPVLGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQLCV 497
           MSG+E V  E AAAP LGE +D+MTALQLVL+KSLAH GL RG+HEGAKVIEKHAAQLCV
Sbjct: 1   MSGDEAVVVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCV 60

Query: 496 IAEDCNQPDFVKLVRALCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKXXXXXXXXV 317
           +AEDCNQPD++KLV+ALCAD+NVSLI+VPSAKTLGEWAGLCKIDSEGKARK        V
Sbjct: 61  LAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVV 120

Query: 316 KDYGEESEGLNIVQEYCKSH 257
           KDYGEE+ GL+IVQE+ KS+
Sbjct: 121 KDYGEETPGLHIVQEHVKSN 140


>ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis
           vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED:
           40S ribosomal protein S12-like isoform 1 [Vitis
           vinifera]
          Length = 142

 Score =  214 bits (545), Expect = 2e-53
 Identities = 110/142 (77%), Positives = 123/142 (86%), Gaps = 2/142 (1%)
 Frame = -2

Query: 676 MSGEEGVPA-ETAA-APVLGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQL 503
           MSGEE V A ET+A AP LGEPMD+MTALQLVL+KSLAH GLARG+HEGAKVIEKHAA L
Sbjct: 1   MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 60

Query: 502 CVIAEDCNQPDFVKLVRALCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKXXXXXXX 323
           CV+AEDCNQPD+VKLV+ALCAD+NVSLI VPSAKTLGEWAGLCKIDSEGKARK       
Sbjct: 61  CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 120

Query: 322 XVKDYGEESEGLNIVQEYCKSH 257
            VKD+GEE+E +N+VQ+  KSH
Sbjct: 121 VVKDFGEETEAMNVVQQQVKSH 142


>dbj|BAC82908.1| putative ribosomal protein S12 [Oryza sativa Japonica Group]
           gi|125599129|gb|EAZ38705.1| hypothetical protein
           OsJ_23105 [Oryza sativa Japonica Group]
           gi|215765075|dbj|BAG86772.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768355|dbj|BAH00584.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 138

 Score =  214 bits (544), Expect = 2e-53
 Identities = 104/136 (76%), Positives = 116/136 (85%)
 Frame = -2

Query: 664 EGVPAETAAAPVLGEPMDIMTALQLVLKKSLAHDGLARGIHEGAKVIEKHAAQLCVIAED 485
           E  P ET AAPVLGEPMD+MTALQLV+KKS AHDGL +G+ E AK IEKHAAQLCV+AED
Sbjct: 3   EETPVETPAAPVLGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62

Query: 484 CNQPDFVKLVRALCADNNVSLIAVPSAKTLGEWAGLCKIDSEGKARKXXXXXXXXVKDYG 305
           C+QPD+VKLV+ALCA++NV L+ VPSAKTLGEWAGLCKIDSEGKARK        VKDYG
Sbjct: 63  CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYG 122

Query: 304 EESEGLNIVQEYCKSH 257
           EESEGLNIVQ+Y KSH
Sbjct: 123 EESEGLNIVQDYVKSH 138