BLASTX nr result

ID: Coptis25_contig00002903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002903
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   102   2e-30
ref|XP_004155079.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   102   2e-30
ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase A...   104   8e-30
emb|CBI15033.3| unnamed protein product [Vitis vinifera]               99   7e-28
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...    99   7e-28

>ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Cucumis sativus]
          Length = 2985

 Score =  102 bits (253), Expect(2) = 2e-30
 Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
 Frame = +2

Query: 209 EISESKRRKPKEVYAKAFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 367
           EIS SKRR PK ++AK  R +++       SG     +SV K+LFSHVWDVL     FQ 
Sbjct: 77  EISSSKRRLPKLMFAKTLRGVVQKAEANKFSGNALPLISVVKVLFSHVWDVLSTTPCFQS 136

Query: 368 EYGKILQHLLEVKECHVHMRKKLYCRFVLLHLGKVEASLSGTNSVQAKS*KELVNC 535
           EYG I++HL+ V++   H+RK++YC  +LL+L KVE SL G N       +EL  C
Sbjct: 137 EYGIIIRHLVAVRDYRFHLRKRIYCNLMLLYLEKVEGSLVGKNDNLYTPKEELFRC 192



 Score = 55.5 bits (132), Expect(2) = 2e-30
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = +1

Query: 73  NDSSFNDREGANLLSTWLEGDKSNEFCQFISQRTSKLKPNDIPN 204
           +D +    EG  LL+TWLEG+K+ +FC+FI Q T+KLKP +IP+
Sbjct: 16  SDKAKTREEGIKLLNTWLEGEKAIDFCKFIGQNTAKLKPEEIPS 59


>ref|XP_004155079.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Cucumis sativus]
          Length = 1304

 Score =  102 bits (253), Expect(2) = 2e-30
 Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
 Frame = +2

Query: 209 EISESKRRKPKEVYAKAFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 367
           EIS SKRR PK ++AK  R +++       SG     +SV K+LFSHVWDVL     FQ 
Sbjct: 77  EISSSKRRLPKLMFAKTLRGVVQKAEANKFSGNALPLISVVKVLFSHVWDVLSTTPCFQS 136

Query: 368 EYGKILQHLLEVKECHVHMRKKLYCRFVLLHLGKVEASLSGTNSVQAKS*KELVNC 535
           EYG I++HL+ V++   H+RK++YC  +LL+L KVE SL G N       +EL  C
Sbjct: 137 EYGIIIRHLVAVRDYRFHLRKRIYCNLMLLYLEKVEGSLVGKNDNLYTPKEELFRC 192



 Score = 55.5 bits (132), Expect(2) = 2e-30
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = +1

Query: 73  NDSSFNDREGANLLSTWLEGDKSNEFCQFISQRTSKLKPNDIPN 204
           +D +    EG  LL+TWLEG+K+ +FC+FI Q T+KLKP +IP+
Sbjct: 16  SDKAKTREEGIKLLNTWLEGEKAIDFCKFIGQNTAKLKPEEIPS 59


>ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase ATM-like [Glycine max]
          Length = 3439

 Score =  104 bits (259), Expect(2) = 8e-30
 Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 206 SEISESKRRKPKEVYAKAFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQ 364
           +EIS SKRR PK +YAK  R +++       SGKM    SV K LF+HVWDVL +   FQ
Sbjct: 78  AEISSSKRRNPKMIYAKTLRIVVQRAEDAKCSGKMLPLSSVVKPLFNHVWDVLSNVPSFQ 137

Query: 365 FEYGKILQHLLEVKECHVHMRKKLYCRFVLLHLGKVEASLSGTNSVQAKS*KEL 526
            EYG IL+HLL V++    MRK++YC  V L++ KVEASL+G N     S +E+
Sbjct: 138 SEYGIILRHLLSVRDYSFQMRKRIYCNLVFLYIEKVEASLNGKNISNCTSKEEV 191



 Score = 51.2 bits (121), Expect(2) = 8e-30
 Identities = 20/44 (45%), Positives = 32/44 (72%)
 Frame = +1

Query: 73  NDSSFNDREGANLLSTWLEGDKSNEFCQFISQRTSKLKPNDIPN 204
           +D +    EG  LL+TWLEG++S  FC+FI   T+KL+P+++P+
Sbjct: 18  SDKAKAREEGIKLLNTWLEGERSYNFCKFIGSNTAKLRPDEVPH 61


>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score = 98.6 bits (244), Expect(2) = 7e-28
 Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
 Frame = +2

Query: 209 EISESKRRKPKEVYAKAFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 367
           EIS SK+R PK V+AK  R +++       SGKM   ++V K LFSH+ DVL+D   FQ 
Sbjct: 79  EISSSKKRLPKLVFAKTLRIVVQRAEDAKFSGKMLPLLTVVKPLFSHISDVLRDIPSFQS 138

Query: 368 EYGKILQHLLEVKECHVHMRKKLYCRFVLLHLGKVEASLSGTNSVQAKS*KELVNC 535
           EYG +L+H+L V++   HMR ++YC  VLL++GKVE S S  ++ Q    +E+  C
Sbjct: 139 EYGIMLRHILAVRDYRFHMRNRVYCNLVLLYMGKVETSFSEKSNSQYNPKEEVFRC 194



 Score = 50.4 bits (119), Expect(2) = 7e-28
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +1

Query: 73  NDSSFNDREGANLLSTWLEGDKSNEFCQFISQRTSKLKPNDIPN 204
           +D +    EG  LL+ WLEG+KS  FC+F+   T+ LKPN+IP+
Sbjct: 18  SDKTKAREEGIKLLNAWLEGEKSIRFCKFLGHNTAMLKPNEIPH 61


>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score = 98.6 bits (244), Expect(2) = 7e-28
 Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
 Frame = +2

Query: 209 EISESKRRKPKEVYAKAFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 367
           EIS SK+R PK V+AK  R +++       SGKM   ++V K LFSH+ DVL+D   FQ 
Sbjct: 79  EISSSKKRLPKLVFAKTLRIVVQRAEDAKFSGKMLPLLTVVKPLFSHISDVLRDIPSFQS 138

Query: 368 EYGKILQHLLEVKECHVHMRKKLYCRFVLLHLGKVEASLSGTNSVQAKS*KELVNC 535
           EYG +L+H+L V++   HMR ++YC  VLL++GKVE S S  ++ Q    +E+  C
Sbjct: 139 EYGIMLRHILAVRDYRFHMRNRVYCNLVLLYMGKVETSFSEKSNSQYNPKEEVFRC 194



 Score = 50.4 bits (119), Expect(2) = 7e-28
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +1

Query: 73  NDSSFNDREGANLLSTWLEGDKSNEFCQFISQRTSKLKPNDIPN 204
           +D +    EG  LL+ WLEG+KS  FC+F+   T+ LKPN+IP+
Sbjct: 18  SDKTKAREEGIKLLNAWLEGEKSIRFCKFLGHNTAMLKPNEIPH 61


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