BLASTX nr result
ID: Coptis25_contig00002901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002901
(2131 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein lig... 672 0.0
ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein lig... 662 0.0
emb|CBI16150.3| unnamed protein product [Vitis vinifera] 645 0.0
ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|2... 635 e-179
ref|XP_003547367.1| PREDICTED: putative E3 ubiquitin-protein lig... 633 e-179
>ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 1
[Vitis vinifera]
Length = 445
Score = 672 bits (1735), Expect = 0.0
Identities = 330/444 (74%), Positives = 375/444 (84%), Gaps = 4/444 (0%)
Frame = +2
Query: 281 MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
MGQGLSC S EH AV++GDLE+VE+ L RDPS+L +TVYDR SALH+AA N QIE
Sbjct: 1 MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60
Query: 461 VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
+LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61 ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120
Query: 641 AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
AYYGHSDCL+ ILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121 AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180
Query: 821 GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181 GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240
Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241 GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300
Query: 1181 PAYSD-EVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1357
P++SD VDD SE S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 301 PSHSDVAVDDNISEASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTAC 360
Query: 1358 MPTPICPFCRSIIVRLVVAKLKSDKEVDI---DINPSKQRKMRKSMNHCEGSSSFKSLSA 1528
+ P+CPFCRS I RL VAK+K++ E D D++ SK R+ RKS N EGSSSFK LSA
Sbjct: 361 LTAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKSRNLSEGSSSFKGLSA 420
Query: 1529 VXXXXXXXXXXXXXITTDSNDWAD 1600
V I + N+W D
Sbjct: 421 VGSFSKMGGRGSGRIAAE-NEWID 443
>ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 2
[Vitis vinifera]
Length = 438
Score = 662 bits (1709), Expect = 0.0
Identities = 325/443 (73%), Positives = 370/443 (83%), Gaps = 3/443 (0%)
Frame = +2
Query: 281 MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
MGQGLSC S EH AV++GDLE+VE+ L RDPS+L +TVYDR SALH+AA N QIE
Sbjct: 1 MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60
Query: 461 VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
+LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61 ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120
Query: 641 AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
AYYGHSDCL+ ILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121 AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180
Query: 821 GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181 GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240
Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241 GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300
Query: 1181 PAYSDEVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTACM 1360
P++SD S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC+
Sbjct: 301 PSHSDVA------ASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTACL 354
Query: 1361 PTPICPFCRSIIVRLVVAKLKSDKEVDI---DINPSKQRKMRKSMNHCEGSSSFKSLSAV 1531
P+CPFCRS I RL VAK+K++ E D D++ SK R+ RKS N EGSSSFK LSAV
Sbjct: 355 TAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKSRNLSEGSSSFKGLSAV 414
Query: 1532 XXXXXXXXXXXXXITTDSNDWAD 1600
I + N+W D
Sbjct: 415 GSFSKMGGRGSGRIAAE-NEWID 436
>emb|CBI16150.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 645 bits (1663), Expect = 0.0
Identities = 308/390 (78%), Positives = 348/390 (89%), Gaps = 1/390 (0%)
Frame = +2
Query: 281 MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
MGQGLSC S EH AV++GDLE+VE+ L RDPS+L +TVYDR SALH+AA N QIE
Sbjct: 1 MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60
Query: 461 VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
+LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61 ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120
Query: 641 AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
AYYGHSDCL+ ILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121 AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180
Query: 821 GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181 GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240
Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241 GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300
Query: 1181 PAYSD-EVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1357
P++SD VDD SE S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 301 PSHSDVAVDDNISEASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTAC 360
Query: 1358 MPTPICPFCRSIIVRLVVAKLKSDKEVDID 1447
+ P+CPFCRS I RL VAK+K++ E D D
Sbjct: 361 LTAPVCPFCRSGIARLAVAKIKTNNEADSD 390
>ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|222847136|gb|EEE84683.1|
predicted protein [Populus trichocarpa]
Length = 442
Score = 635 bits (1639), Expect = e-179
Identities = 308/420 (73%), Positives = 358/420 (85%), Gaps = 4/420 (0%)
Frame = +2
Query: 281 MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
MGQGLSC +S +H F AV GDL+ V A LERDPS L++ T YDR LH+AA N QIE
Sbjct: 1 MGQGLSCAASQDHRFFSAVHFGDLDTVNAMLERDPS-LLYQTTYDRQYPLHIAAANGQIE 59
Query: 461 VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
+LS +L+R+V+PD++NR KQTPLMLA MHGKI+CV+KL+EAGAN+L FDS+NGRTCLH+A
Sbjct: 60 ILSMLLERSVDPDMVNRQKQTPLMLAAMHGKISCVKKLVEAGANMLKFDSLNGRTCLHFA 119
Query: 641 AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
AYYGHSDCL+ ILSA SSPV+ SWG+TRFVNIRDG GATPLHLAARQRRP+CVHILLD+
Sbjct: 120 AYYGHSDCLQAILSAVQSSPVAVSWGYTRFVNIRDGRGATPLHLAARQRRPECVHILLDN 179
Query: 821 GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
GALVC+STGGYG PG+TPLHLAARGGSLDCIRELLAWGADR+ RDASG IPY+VALK+++
Sbjct: 180 GALVCSSTGGYGSPGTTPLHLAARGGSLDCIRELLAWGADRMQRDASGRIPYVVALKYRN 239
Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
G CAALLNP+SAEP+VWPSPLKFISELN EAK LLE ALMEAN+EREK ILK T +SL S
Sbjct: 240 GTCAALLNPSSAEPLVWPSPLKFISELNQEAKALLECALMEANREREKNILKGTGYSLPS 299
Query: 1181 PAYSDE-VDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1357
P++SD+ DD SE SDTELC ICF+QVCTIEV++CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 300 PSHSDDGTDDNISEASDTELCCICFEQVCTIEVEDCGHQMCAQCTLALCCHNKPNPTTAC 359
Query: 1358 MPTPICPFCRSIIVRLVVAKLK--SDKEVDI-DINPSKQRKMRKSMNHCEGSSSFKSLSA 1528
+ P+CPFCRS I RLVVAK+K +D + DI D+ K RK R+S+N EGSSSFK LSA
Sbjct: 360 LTPPVCPFCRSTIARLVVAKMKDCNDADQDIGDVGSPKLRKSRRSLNFSEGSSSFKGLSA 419
>ref|XP_003547367.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Glycine
max]
Length = 444
Score = 633 bits (1632), Expect = e-179
Identities = 309/422 (73%), Positives = 350/422 (82%), Gaps = 5/422 (1%)
Frame = +2
Query: 281 MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
MGQ LSC+ + +H AV+ GDLE V L+ DPS+L +T+YDR S LH+AA NDQIE
Sbjct: 1 MGQSLSCSGNYDHGLFTAVQHGDLEIVTTLLDSDPSLLHQTTLYDRHSPLHIAATNDQIE 60
Query: 461 VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
+LS +LD ++NPD+LNRHKQTPLMLA MHG I CV+KLL+AGAN+LMFD+ GRTCLHYA
Sbjct: 61 ILSKLLDGSLNPDVLNRHKQTPLMLAAMHGNIACVEKLLQAGANVLMFDTSYGRTCLHYA 120
Query: 641 AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
AYYGHS CLK ILS+A SSPVS SWGF+RFVNIRDG GATPLHLAARQRR +CVHILLDS
Sbjct: 121 AYYGHSSCLKAILSSAQSSPVSASWGFSRFVNIRDGKGATPLHLAARQRRSECVHILLDS 180
Query: 821 GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
GALVCASTGGYG PGSTPLHLAARGGS+DCIRELLAWGADRL RDASG IPYMVALKHKH
Sbjct: 181 GALVCASTGGYGCPGSTPLHLAARGGSIDCIRELLAWGADRLQRDASGRIPYMVALKHKH 240
Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
GACA+LLNPTSAEP+VWPSPLKFISELNPEAK LLE+ALM+AN+EREK ILK +S+SL S
Sbjct: 241 GACASLLNPTSAEPLVWPSPLKFISELNPEAKALLEQALMDANREREKNILKGSSYSLPS 300
Query: 1181 PAYSDEVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTACM 1360
P++SD V D SE S++ELC ICF+QVCTIEVQNCGHQMCA CTL+LCCHNKPNP TAC+
Sbjct: 301 PSHSDGVADNMSEVSESELCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNKPNPATACL 360
Query: 1361 PTPICPFCRSIIVRLVVAKLKSDKEVD---IDINPSKQRKMRKSMNHC--EGSSSFKSLS 1525
P+CPFCRS I RLVV K + E D DIN SK K + + H GSSSFK LS
Sbjct: 361 TPPVCPFCRSTITRLVVVKTECHDETDQDSADINCSKLSKSSRKLRHLNDSGSSSFKGLS 420
Query: 1526 AV 1531
+V
Sbjct: 421 SV 422