BLASTX nr result

ID: Coptis25_contig00002901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002901
         (2131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein lig...   672   0.0  
ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein lig...   662   0.0  
emb|CBI16150.3| unnamed protein product [Vitis vinifera]              645   0.0  
ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|2...   635   e-179
ref|XP_003547367.1| PREDICTED: putative E3 ubiquitin-protein lig...   633   e-179

>ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 1
            [Vitis vinifera]
          Length = 445

 Score =  672 bits (1735), Expect = 0.0
 Identities = 330/444 (74%), Positives = 375/444 (84%), Gaps = 4/444 (0%)
 Frame = +2

Query: 281  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
            MGQGLSC  S EH    AV++GDLE+VE+ L RDPS+L  +TVYDR SALH+AA N QIE
Sbjct: 1    MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60

Query: 461  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
            +LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61   ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120

Query: 641  AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
            AYYGHSDCL+ ILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121  AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180

Query: 821  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
            GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181  GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240

Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
            GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241  GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300

Query: 1181 PAYSD-EVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1357
            P++SD  VDD  SE S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 301  PSHSDVAVDDNISEASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTAC 360

Query: 1358 MPTPICPFCRSIIVRLVVAKLKSDKEVDI---DINPSKQRKMRKSMNHCEGSSSFKSLSA 1528
            +  P+CPFCRS I RL VAK+K++ E D    D++ SK R+ RKS N  EGSSSFK LSA
Sbjct: 361  LTAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKSRNLSEGSSSFKGLSA 420

Query: 1529 VXXXXXXXXXXXXXITTDSNDWAD 1600
            V             I  + N+W D
Sbjct: 421  VGSFSKMGGRGSGRIAAE-NEWID 443


>ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 2
            [Vitis vinifera]
          Length = 438

 Score =  662 bits (1709), Expect = 0.0
 Identities = 325/443 (73%), Positives = 370/443 (83%), Gaps = 3/443 (0%)
 Frame = +2

Query: 281  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
            MGQGLSC  S EH    AV++GDLE+VE+ L RDPS+L  +TVYDR SALH+AA N QIE
Sbjct: 1    MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60

Query: 461  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
            +LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61   ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120

Query: 641  AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
            AYYGHSDCL+ ILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121  AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180

Query: 821  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
            GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181  GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240

Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
            GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241  GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300

Query: 1181 PAYSDEVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTACM 1360
            P++SD         S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC+
Sbjct: 301  PSHSDVA------ASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTACL 354

Query: 1361 PTPICPFCRSIIVRLVVAKLKSDKEVDI---DINPSKQRKMRKSMNHCEGSSSFKSLSAV 1531
              P+CPFCRS I RL VAK+K++ E D    D++ SK R+ RKS N  EGSSSFK LSAV
Sbjct: 355  TAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKSRNLSEGSSSFKGLSAV 414

Query: 1532 XXXXXXXXXXXXXITTDSNDWAD 1600
                         I  + N+W D
Sbjct: 415  GSFSKMGGRGSGRIAAE-NEWID 436


>emb|CBI16150.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  645 bits (1663), Expect = 0.0
 Identities = 308/390 (78%), Positives = 348/390 (89%), Gaps = 1/390 (0%)
 Frame = +2

Query: 281  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
            MGQGLSC  S EH    AV++GDLE+VE+ L RDPS+L  +TVYDR SALH+AA N QIE
Sbjct: 1    MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60

Query: 461  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
            +LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61   ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120

Query: 641  AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
            AYYGHSDCL+ ILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121  AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180

Query: 821  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
            GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181  GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240

Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
            GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241  GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300

Query: 1181 PAYSD-EVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1357
            P++SD  VDD  SE S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 301  PSHSDVAVDDNISEASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTAC 360

Query: 1358 MPTPICPFCRSIIVRLVVAKLKSDKEVDID 1447
            +  P+CPFCRS I RL VAK+K++ E D D
Sbjct: 361  LTAPVCPFCRSGIARLAVAKIKTNNEADSD 390


>ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|222847136|gb|EEE84683.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  635 bits (1639), Expect = e-179
 Identities = 308/420 (73%), Positives = 358/420 (85%), Gaps = 4/420 (0%)
 Frame = +2

Query: 281  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
            MGQGLSC +S +H F  AV  GDL+ V A LERDPS L++ T YDR   LH+AA N QIE
Sbjct: 1    MGQGLSCAASQDHRFFSAVHFGDLDTVNAMLERDPS-LLYQTTYDRQYPLHIAAANGQIE 59

Query: 461  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
            +LS +L+R+V+PD++NR KQTPLMLA MHGKI+CV+KL+EAGAN+L FDS+NGRTCLH+A
Sbjct: 60   ILSMLLERSVDPDMVNRQKQTPLMLAAMHGKISCVKKLVEAGANMLKFDSLNGRTCLHFA 119

Query: 641  AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
            AYYGHSDCL+ ILSA  SSPV+ SWG+TRFVNIRDG GATPLHLAARQRRP+CVHILLD+
Sbjct: 120  AYYGHSDCLQAILSAVQSSPVAVSWGYTRFVNIRDGRGATPLHLAARQRRPECVHILLDN 179

Query: 821  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
            GALVC+STGGYG PG+TPLHLAARGGSLDCIRELLAWGADR+ RDASG IPY+VALK+++
Sbjct: 180  GALVCSSTGGYGSPGTTPLHLAARGGSLDCIRELLAWGADRMQRDASGRIPYVVALKYRN 239

Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
            G CAALLNP+SAEP+VWPSPLKFISELN EAK LLE ALMEAN+EREK ILK T +SL S
Sbjct: 240  GTCAALLNPSSAEPLVWPSPLKFISELNQEAKALLECALMEANREREKNILKGTGYSLPS 299

Query: 1181 PAYSDE-VDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1357
            P++SD+  DD  SE SDTELC ICF+QVCTIEV++CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 300  PSHSDDGTDDNISEASDTELCCICFEQVCTIEVEDCGHQMCAQCTLALCCHNKPNPTTAC 359

Query: 1358 MPTPICPFCRSIIVRLVVAKLK--SDKEVDI-DINPSKQRKMRKSMNHCEGSSSFKSLSA 1528
            +  P+CPFCRS I RLVVAK+K  +D + DI D+   K RK R+S+N  EGSSSFK LSA
Sbjct: 360  LTPPVCPFCRSTIARLVVAKMKDCNDADQDIGDVGSPKLRKSRRSLNFSEGSSSFKGLSA 419


>ref|XP_003547367.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Glycine
            max]
          Length = 444

 Score =  633 bits (1632), Expect = e-179
 Identities = 309/422 (73%), Positives = 350/422 (82%), Gaps = 5/422 (1%)
 Frame = +2

Query: 281  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHSTVYDRLSALHLAAINDQIE 460
            MGQ LSC+ + +H    AV+ GDLE V   L+ DPS+L  +T+YDR S LH+AA NDQIE
Sbjct: 1    MGQSLSCSGNYDHGLFTAVQHGDLEIVTTLLDSDPSLLHQTTLYDRHSPLHIAATNDQIE 60

Query: 461  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 640
            +LS +LD ++NPD+LNRHKQTPLMLA MHG I CV+KLL+AGAN+LMFD+  GRTCLHYA
Sbjct: 61   ILSKLLDGSLNPDVLNRHKQTPLMLAAMHGNIACVEKLLQAGANVLMFDTSYGRTCLHYA 120

Query: 641  AYYGHSDCLKGILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 820
            AYYGHS CLK ILS+A SSPVS SWGF+RFVNIRDG GATPLHLAARQRR +CVHILLDS
Sbjct: 121  AYYGHSSCLKAILSSAQSSPVSASWGFSRFVNIRDGKGATPLHLAARQRRSECVHILLDS 180

Query: 821  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 1000
            GALVCASTGGYG PGSTPLHLAARGGS+DCIRELLAWGADRL RDASG IPYMVALKHKH
Sbjct: 181  GALVCASTGGYGCPGSTPLHLAARGGSIDCIRELLAWGADRLQRDASGRIPYMVALKHKH 240

Query: 1001 GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1180
            GACA+LLNPTSAEP+VWPSPLKFISELNPEAK LLE+ALM+AN+EREK ILK +S+SL S
Sbjct: 241  GACASLLNPTSAEPLVWPSPLKFISELNPEAKALLEQALMDANREREKNILKGSSYSLPS 300

Query: 1181 PAYSDEVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTACM 1360
            P++SD V D  SE S++ELC ICF+QVCTIEVQNCGHQMCA CTL+LCCHNKPNP TAC+
Sbjct: 301  PSHSDGVADNMSEVSESELCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNKPNPATACL 360

Query: 1361 PTPICPFCRSIIVRLVVAKLKSDKEVD---IDINPSKQRKMRKSMNHC--EGSSSFKSLS 1525
              P+CPFCRS I RLVV K +   E D    DIN SK  K  + + H    GSSSFK LS
Sbjct: 361  TPPVCPFCRSTITRLVVVKTECHDETDQDSADINCSKLSKSSRKLRHLNDSGSSSFKGLS 420

Query: 1526 AV 1531
            +V
Sbjct: 421  SV 422


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