BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002900
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group] g...   569   e-160
ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [S...   567   e-159
ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_003558573.1| PREDICTED: succinate dehydrogenase [ubiquino...   566   e-159
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   566   e-159

>ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group]
            gi|75135397|sp|Q6ZDY8.1|DHSA_ORYSJ RecName:
            Full=Succinate dehydrogenase [ubiquinone] flavoprotein
            subunit, mitochondrial; AltName: Full=Flavoprotein
            subunit of complex II; Short=FP; Flags: Precursor
            gi|34394418|dbj|BAC83515.1| putative succinate
            dehydrogenase flavoprotein alpha subunit [Oryza sativa
            Japonica Group] gi|113610381|dbj|BAF20759.1| Os07g0134800
            [Oryza sativa Japonica Group]
            gi|215686878|dbj|BAG89728.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218199047|gb|EEC81474.1|
            hypothetical protein OsI_24801 [Oryza sativa Indica
            Group]
          Length = 630

 Score =  569 bits (1466), Expect = e-160
 Identities = 275/293 (93%), Positives = 286/293 (97%)
 Frame = -3

Query: 881  KIYQRAFAGQSLDFGKGGQAYRSACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM 702
            KIYQRAF GQSLDFGKGGQAYR ACAADRTGHA+LHTLYGQAMKHNTQFFVEYFALDLIM
Sbjct: 151  KIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIM 210

Query: 701  DSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 522
            DS GTCQGVIALNMEDGTLHRFRA +TILATGGYGRAYFSATSAHTCTGDGNAMVARAGL
Sbjct: 211  DSEGTCQGVIALNMEDGTLHRFRATNTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 270

Query: 521  PLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSR 342
            PL+DLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSR
Sbjct: 271  PLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSR 330

Query: 341  AMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLAT 162
            +MTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVT+EPIPVL T
Sbjct: 331  SMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPT 390

Query: 161  VHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGANRLGANAL 3
            VHYNMGGIPTNYHGEVV +KGD+PDS+VPGLMAAGEAACASVHGANRLGAN+L
Sbjct: 391  VHYNMGGIPTNYHGEVVTMKGDNPDSVVPGLMAAGEAACASVHGANRLGANSL 443


>ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [Sorghum bicolor]
            gi|241917660|gb|EER90804.1| hypothetical protein
            SORBIDRAFT_01g006490 [Sorghum bicolor]
          Length = 620

 Score =  567 bits (1462), Expect = e-159
 Identities = 273/293 (93%), Positives = 286/293 (97%)
 Frame = -3

Query: 881  KIYQRAFAGQSLDFGKGGQAYRSACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM 702
            KIYQRAF GQSLDFGKGGQAYR ACAADRTGHA+LHTLYGQAMKHNTQFFVEYFALDL+M
Sbjct: 141  KIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLLM 200

Query: 701  DSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 522
            D+ G CQGVIALNMEDGTLHRFRAA+TILATGGYGRAYFSATSAHTCTGDGNAMVARAGL
Sbjct: 201  DNEGICQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 260

Query: 521  PLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSR 342
            PL+DLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSR
Sbjct: 261  PLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSR 320

Query: 341  AMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLAT 162
            +MTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVT+EPIPVL T
Sbjct: 321  SMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPT 380

Query: 161  VHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGANRLGANAL 3
            VHYNMGGIPTNYHGEV+ IKGDDPD++VPGLMAAGEAACASVHGANRLGAN+L
Sbjct: 381  VHYNMGGIPTNYHGEVLHIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSL 433


>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
            predicted protein [Populus trichocarpa]
          Length = 633

 Score =  566 bits (1459), Expect = e-159
 Identities = 273/293 (93%), Positives = 285/293 (97%)
 Frame = -3

Query: 881  KIYQRAFAGQSLDFGKGGQAYRSACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM 702
            KIYQRAF GQSLDFGKGGQAYR ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM
Sbjct: 154  KIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM 213

Query: 701  DSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 522
            ++ G CQGVIALNMEDGTLHRFRAASTILATGGYGR YFSATSAHTCTGDGNAMVARAG+
Sbjct: 214  NNDGICQGVIALNMEDGTLHRFRAASTILATGGYGRTYFSATSAHTCTGDGNAMVARAGI 273

Query: 521  PLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSR 342
            PLEDLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSR
Sbjct: 274  PLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSR 333

Query: 341  AMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLAT 162
            +MTMEIREGRGVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVT+EPIPVL T
Sbjct: 334  SMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPT 393

Query: 161  VHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGANRLGANAL 3
            VHYNMGGIPTNYHGEVV IKGDDPD+++PGLMAAGEAACASVHGANRLGAN+L
Sbjct: 394  VHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGANRLGANSL 446


>ref|XP_003558573.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial-like [Brachypodium distachyon]
          Length = 617

 Score =  566 bits (1458), Expect = e-159
 Identities = 271/293 (92%), Positives = 286/293 (97%)
 Frame = -3

Query: 881  KIYQRAFAGQSLDFGKGGQAYRSACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM 702
            KIYQRAF GQSLDFGKGGQAYR ACAADRTGHA+LHTLYGQAMKHNTQFFVEYFALDLIM
Sbjct: 138  KIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIM 197

Query: 701  DSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 522
            D+ GTCQGVIALNMEDGTLHRFR+ +TI+ATGGYGRAYFSATSAHTCTGDGNAMVARAGL
Sbjct: 198  DNEGTCQGVIALNMEDGTLHRFRSTNTIIATGGYGRAYFSATSAHTCTGDGNAMVARAGL 257

Query: 521  PLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSR 342
            PL+DLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSR
Sbjct: 258  PLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSR 317

Query: 341  AMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLAT 162
            +MTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVT+EPIPVL T
Sbjct: 318  SMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPT 377

Query: 161  VHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGANRLGANAL 3
            VHYNMGGIPTNYHGEVV IKGD+PDS++PGL+AAGEAACASVHGANRLGAN+L
Sbjct: 378  VHYNMGGIPTNYHGEVVHIKGDNPDSVIPGLLAAGEAACASVHGANRLGANSL 430


>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
            gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
            putative [Ricinus communis]
          Length = 622

 Score =  566 bits (1458), Expect = e-159
 Identities = 272/293 (92%), Positives = 287/293 (97%)
 Frame = -3

Query: 881  KIYQRAFAGQSLDFGKGGQAYRSACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM 702
            +IYQRAF GQSLDFGKGGQAYR ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDL+M
Sbjct: 143  RIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLM 202

Query: 701  DSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 522
            +S G+CQGVIA+NMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL
Sbjct: 203  NSDGSCQGVIAMNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGL 262

Query: 521  PLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSR 342
            PL+DLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSR
Sbjct: 263  PLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSR 322

Query: 341  AMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLAT 162
            +MTMEIREGRGVGPLKDHIYLHLNHLPP+VLKERLPGISETAAIFAGVDVT+EPIPVL T
Sbjct: 323  SMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPT 382

Query: 161  VHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGANRLGANAL 3
            VHYNMGGIPTNYHGEVV +KG+DPDS+VPGLMAAGEAACASVHGANRLGAN+L
Sbjct: 383  VHYNMGGIPTNYHGEVVTVKGNDPDSVVPGLMAAGEAACASVHGANRLGANSL 435