BLASTX nr result
ID: Coptis25_contig00002897
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002897
(2093 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273569.1| PREDICTED: delta-1-pyrroline-5-carboxylate d... 508 0.0
emb|CBI15259.3| unnamed protein product [Vitis vinifera] 508 0.0
ref|XP_002511535.1| 1-pyrroline-5-carboxylate dehydrogenase, put... 497 0.0
ref|XP_002330119.1| predicted protein [Populus trichocarpa] gi|2... 506 0.0
ref|XP_003549664.1| PREDICTED: delta-1-pyrroline-5-carboxylate d... 499 0.0
>ref|XP_002273569.1| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1,
mitochondrial-like [Vitis vinifera]
Length = 555
Score = 508 bits (1307), Expect(2) = 0.0
Identities = 244/287 (85%), Positives = 265/287 (92%)
Frame = -1
Query: 1874 RSLQTLSFATVEAEAISGSQPAEVHNLVQGCWKGTSNWNTLADPLNGEPFIRVAEVDETG 1695
RS+ L FAT+E E ISGSQPAEV NLVQG W G+++ T+ DPLNGEPFI+VAEVDETG
Sbjct: 30 RSIHNLPFATIEVEEISGSQPAEVQNLVQGKWTGSTSGETIVDPLNGEPFIQVAEVDETG 89
Query: 1694 VKPFVDSLSKCPKSGLHNPFRSPERYLLYGDISTKAAHMLSQPEVSNFFTRLIQRVSPKS 1515
++PFVDSLSKCPK GLHNPF++PERYL+ GDIS KAAHMLS P+VS+FFTRLIQRV+PKS
Sbjct: 90 IQPFVDSLSKCPKHGLHNPFKAPERYLMLGDISNKAAHMLSLPKVSDFFTRLIQRVAPKS 149
Query: 1514 YQQALAEVYVTQKFFENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVVIVTPFNFP 1335
YQQAL EVYVTQKF ENF GDQVRFLARSFAVPGNHLGQQSHGFRWPYGPV IVTPFNFP
Sbjct: 150 YQQALGEVYVTQKFLENFSGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIVTPFNFP 209
Query: 1334 LEIPVLQLMGALYMGNKPLLKVDSKVSVVMDQMLRLLHHCGLPMEDVDFINSDGKTMNKL 1155
LEIPVLQLMGALYMGNKP+LKVDSKVS+VM+QM+RLLHHCGLPMED+DFINSDGKTMNKL
Sbjct: 210 LEIPVLQLMGALYMGNKPILKVDSKVSIVMEQMIRLLHHCGLPMEDLDFINSDGKTMNKL 269
Query: 1154 LLEAKPRMTLFTGSSRVAEKLAFDLKGRIKLEDAGFDWKILGPDVHE 1014
LLEA PRMTLFTGSSRVA+KLA DLKGRIKLEDAGFDWKILGPDV E
Sbjct: 270 LLEANPRMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQE 316
Score = 437 bits (1125), Expect(2) = 0.0
Identities = 205/238 (86%), Positives = 225/238 (94%)
Frame = -2
Query: 946 DYVAWVCDQDAYACSGQKCSAQSILFMHENWASTDLISRMKSLAERRKLEDLTIGPVLTV 767
DYVAWVCDQDAYACSGQKCSAQSI+FMHENW + LISRMK LA RRKLEDLTIGPVL+
Sbjct: 318 DYVAWVCDQDAYACSGQKCSAQSIVFMHENWFKSSLISRMKDLAARRKLEDLTIGPVLSF 377
Query: 766 TTEAMLEHMNALLKIPGSKLLFGGEALENHSIPNIYGAIKPTAVYVPLDEILKDNNFELV 587
TTEAMLEHMN LL+IPGS+LLFGG+ALENHSIP IYGA+KPTA+Y+PL+E+LKD N+ELV
Sbjct: 378 TTEAMLEHMNKLLQIPGSELLFGGKALENHSIPPIYGALKPTAIYIPLEEMLKDGNYELV 437
Query: 586 TKEIFGPFQVVTDYKQDQLAKVLDALERMHAHLTAAVVSNDLLFLQEVIGRSVNGTTYAG 407
T+EIFGPFQVVTDYK +QL +VL+ALERMHAHLTAAVVSND LFLQEVIG+SVNGTTYAG
Sbjct: 438 TREIFGPFQVVTDYKDNQLPRVLEALERMHAHLTAAVVSNDSLFLQEVIGKSVNGTTYAG 497
Query: 406 LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDVGPVPQHWEIPPST 233
LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYD+GP+P HWEIPP+T
Sbjct: 498 LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPSHWEIPPAT 555
>emb|CBI15259.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 508 bits (1307), Expect(2) = 0.0
Identities = 244/287 (85%), Positives = 265/287 (92%)
Frame = -1
Query: 1874 RSLQTLSFATVEAEAISGSQPAEVHNLVQGCWKGTSNWNTLADPLNGEPFIRVAEVDETG 1695
RS+ L FAT+E E ISGSQPAEV NLVQG W G+++ T+ DPLNGEPFI+VAEVDETG
Sbjct: 21 RSIHNLPFATIEVEEISGSQPAEVQNLVQGKWTGSTSGETIVDPLNGEPFIQVAEVDETG 80
Query: 1694 VKPFVDSLSKCPKSGLHNPFRSPERYLLYGDISTKAAHMLSQPEVSNFFTRLIQRVSPKS 1515
++PFVDSLSKCPK GLHNPF++PERYL+ GDIS KAAHMLS P+VS+FFTRLIQRV+PKS
Sbjct: 81 IQPFVDSLSKCPKHGLHNPFKAPERYLMLGDISNKAAHMLSLPKVSDFFTRLIQRVAPKS 140
Query: 1514 YQQALAEVYVTQKFFENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVVIVTPFNFP 1335
YQQAL EVYVTQKF ENF GDQVRFLARSFAVPGNHLGQQSHGFRWPYGPV IVTPFNFP
Sbjct: 141 YQQALGEVYVTQKFLENFSGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIVTPFNFP 200
Query: 1334 LEIPVLQLMGALYMGNKPLLKVDSKVSVVMDQMLRLLHHCGLPMEDVDFINSDGKTMNKL 1155
LEIPVLQLMGALYMGNKP+LKVDSKVS+VM+QM+RLLHHCGLPMED+DFINSDGKTMNKL
Sbjct: 201 LEIPVLQLMGALYMGNKPILKVDSKVSIVMEQMIRLLHHCGLPMEDLDFINSDGKTMNKL 260
Query: 1154 LLEAKPRMTLFTGSSRVAEKLAFDLKGRIKLEDAGFDWKILGPDVHE 1014
LLEA PRMTLFTGSSRVA+KLA DLKGRIKLEDAGFDWKILGPDV E
Sbjct: 261 LLEANPRMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQE 307
Score = 437 bits (1125), Expect(2) = 0.0
Identities = 205/238 (86%), Positives = 225/238 (94%)
Frame = -2
Query: 946 DYVAWVCDQDAYACSGQKCSAQSILFMHENWASTDLISRMKSLAERRKLEDLTIGPVLTV 767
DYVAWVCDQDAYACSGQKCSAQSI+FMHENW + LISRMK LA RRKLEDLTIGPVL+
Sbjct: 309 DYVAWVCDQDAYACSGQKCSAQSIVFMHENWFKSSLISRMKDLAARRKLEDLTIGPVLSF 368
Query: 766 TTEAMLEHMNALLKIPGSKLLFGGEALENHSIPNIYGAIKPTAVYVPLDEILKDNNFELV 587
TTEAMLEHMN LL+IPGS+LLFGG+ALENHSIP IYGA+KPTA+Y+PL+E+LKD N+ELV
Sbjct: 369 TTEAMLEHMNKLLQIPGSELLFGGKALENHSIPPIYGALKPTAIYIPLEEMLKDGNYELV 428
Query: 586 TKEIFGPFQVVTDYKQDQLAKVLDALERMHAHLTAAVVSNDLLFLQEVIGRSVNGTTYAG 407
T+EIFGPFQVVTDYK +QL +VL+ALERMHAHLTAAVVSND LFLQEVIG+SVNGTTYAG
Sbjct: 429 TREIFGPFQVVTDYKDNQLPRVLEALERMHAHLTAAVVSNDSLFLQEVIGKSVNGTTYAG 488
Query: 406 LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDVGPVPQHWEIPPST 233
LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYD+GP+P HWEIPP+T
Sbjct: 489 LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPSHWEIPPAT 546
>ref|XP_002511535.1| 1-pyrroline-5-carboxylate dehydrogenase, putative [Ricinus communis]
gi|223550650|gb|EEF52137.1| 1-pyrroline-5-carboxylate
dehydrogenase, putative [Ricinus communis]
Length = 584
Score = 497 bits (1279), Expect(2) = 0.0
Identities = 238/291 (81%), Positives = 265/291 (91%), Gaps = 4/291 (1%)
Frame = -1
Query: 1874 RSLQTLSFATVEAEAISGSQPAEVHNLVQGCWKGTSNWNTLADPLNGEPFIRVAEVDETG 1695
RS+ +L FATVE E ISGSQPAEV NLVQG W G+S+WNT+ DPLNGEPFI++AEVDETG
Sbjct: 55 RSVHSLPFATVEVEEISGSQPAEVRNLVQGKWTGSSSWNTILDPLNGEPFIKIAEVDETG 114
Query: 1694 VKPFVDSLSKCPKSGLHNPFRSPERY----LLYGDISTKAAHMLSQPEVSNFFTRLIQRV 1527
++PFV+SLSKCPK GLHNPF+ PER+ LYGDIS KAAHMLS P+VSNFFTRLIQRV
Sbjct: 115 IQPFVESLSKCPKHGLHNPFKLPERFELHVSLYGDISAKAAHMLSLPKVSNFFTRLIQRV 174
Query: 1526 SPKSYQQALAEVYVTQKFFENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVVIVTP 1347
+PKSYQQAL EV VTQKF ENF GDQVRFLARSF++PGNHLGQQSHGFRWPYGPV I+TP
Sbjct: 175 APKSYQQALGEVQVTQKFLENFSGDQVRFLARSFSIPGNHLGQQSHGFRWPYGPVAIITP 234
Query: 1346 FNFPLEIPVLQLMGALYMGNKPLLKVDSKVSVVMDQMLRLLHHCGLPMEDVDFINSDGKT 1167
FNFPLEIPVLQLMGALYMGNKP+LKVDSKV +VM+QM+RLLH+CGLP+EDVDFINSDGKT
Sbjct: 235 FNFPLEIPVLQLMGALYMGNKPILKVDSKVCIVMEQMMRLLHYCGLPVEDVDFINSDGKT 294
Query: 1166 MNKLLLEAKPRMTLFTGSSRVAEKLAFDLKGRIKLEDAGFDWKILGPDVHE 1014
MNK+LLEA P MTLFTGSSRVA+KLA DLKGRIKLEDAGFDWK+LGPDV+E
Sbjct: 295 MNKILLEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKVLGPDVNE 345
Score = 438 bits (1127), Expect(2) = 0.0
Identities = 206/238 (86%), Positives = 225/238 (94%)
Frame = -2
Query: 946 DYVAWVCDQDAYACSGQKCSAQSILFMHENWASTDLISRMKSLAERRKLEDLTIGPVLTV 767
DYVAWVCDQDAYACSGQKCSAQSILFMHENWA T L+S+MK LAERRKLEDLTIGPVLT
Sbjct: 347 DYVAWVCDQDAYACSGQKCSAQSILFMHENWAGTSLLSKMKDLAERRKLEDLTIGPVLTF 406
Query: 766 TTEAMLEHMNALLKIPGSKLLFGGEALENHSIPNIYGAIKPTAVYVPLDEILKDNNFELV 587
TTEAM+ HMN LL+IPGSKLLFGG+ LENHSIP IYGA+KPTA+YVP++E+LK+ N+ELV
Sbjct: 407 TTEAMVGHMNKLLQIPGSKLLFGGKPLENHSIPPIYGALKPTAIYVPIEEMLKERNYELV 466
Query: 586 TKEIFGPFQVVTDYKQDQLAKVLDALERMHAHLTAAVVSNDLLFLQEVIGRSVNGTTYAG 407
T+EIFGPFQV+T+YK+DQL VLDALERMHAHLTAAVVSND LFLQEVIG+SVNGTTYAG
Sbjct: 467 TREIFGPFQVITEYKRDQLPLVLDALERMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAG 526
Query: 406 LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDVGPVPQHWEIPPST 233
LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYD GP+P+HWEIPPST
Sbjct: 527 LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDFGPLPKHWEIPPST 584
>ref|XP_002330119.1| predicted protein [Populus trichocarpa] gi|222871253|gb|EEF08384.1|
predicted protein [Populus trichocarpa]
Length = 566
Score = 506 bits (1303), Expect(2) = 0.0
Identities = 240/287 (83%), Positives = 266/287 (92%)
Frame = -1
Query: 1874 RSLQTLSFATVEAEAISGSQPAEVHNLVQGCWKGTSNWNTLADPLNGEPFIRVAEVDETG 1695
RS+ +L FATV+AE ISGSQPA+VHNLVQG W G+S WNT+ DPLNGEPFI++AEVDETG
Sbjct: 25 RSVHSLPFATVDAEGISGSQPAKVHNLVQGKWIGSSTWNTIVDPLNGEPFIKIAEVDETG 84
Query: 1694 VKPFVDSLSKCPKSGLHNPFRSPERYLLYGDISTKAAHMLSQPEVSNFFTRLIQRVSPKS 1515
+PFV+SLSKCPK GLHNPF+SPERYLLYGDI+ KAAHMLS P+VS+FFTRLIQRV+PKS
Sbjct: 85 TQPFVESLSKCPKHGLHNPFKSPERYLLYGDITAKAAHMLSVPKVSDFFTRLIQRVAPKS 144
Query: 1514 YQQALAEVYVTQKFFENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVVIVTPFNFP 1335
YQQAL EV VTQKF ENF GDQVRFLARSFAVPGNHLGQQSHGFRWPYGPV I+TPFNFP
Sbjct: 145 YQQALGEVQVTQKFLENFSGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFP 204
Query: 1334 LEIPVLQLMGALYMGNKPLLKVDSKVSVVMDQMLRLLHHCGLPMEDVDFINSDGKTMNKL 1155
LEIP+LQLMGALYMGNKP+LKVDSKV +VM+QM+RLLHHCG+P+ DVDFINSDGKTMNKL
Sbjct: 205 LEIPLLQLMGALYMGNKPILKVDSKVCIVMEQMIRLLHHCGMPLSDVDFINSDGKTMNKL 264
Query: 1154 LLEAKPRMTLFTGSSRVAEKLAFDLKGRIKLEDAGFDWKILGPDVHE 1014
L EA P+MTLFTGSS+VAEKLA DLKGRIKLEDAGFDWKILGPDV+E
Sbjct: 265 LQEANPQMTLFTGSSKVAEKLAVDLKGRIKLEDAGFDWKILGPDVNE 311
Score = 427 bits (1099), Expect(2) = 0.0
Identities = 204/254 (80%), Positives = 228/254 (89%), Gaps = 16/254 (6%)
Frame = -2
Query: 946 DYVAWVCDQDAYACSGQKCSAQSILFMHENWASTDLISRMKSLAERRKLEDLTIGPVLTV 767
DY+AWVCDQDAYACSGQKCSAQSILFMHENW++T LIS+MK LAERRKLEDLTIGPVLT+
Sbjct: 313 DYIAWVCDQDAYACSGQKCSAQSILFMHENWSATSLISKMKDLAERRKLEDLTIGPVLTL 372
Query: 766 TTEAMLEHMNALLKIPGSKLLFGGEALENHSIPNIYGAIKPTAVYVPLDEILKDNNFELV 587
TTEAML+HMN LL+IPGSKLLFGG+ LENHSIP+IYGA+KPTA+YVPL+EIL+ N+ELV
Sbjct: 373 TTEAMLDHMNKLLQIPGSKLLFGGKPLENHSIPSIYGALKPTAIYVPLEEILRAKNYELV 432
Query: 586 TKEIFGPFQVVTDYKQDQLAKVLDALERMHAHLTAAVVSNDLLFLQ-------------- 449
T+EIFGPFQV+T+YK+DQL VLDALERMHAHLTAAVVSND+LFLQ
Sbjct: 433 TREIFGPFQVITEYKKDQLPMVLDALERMHAHLTAAVVSNDVLFLQARLENIFASHPTPL 492
Query: 448 --EVIGRSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYD 275
EVIG++VNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHRE+IYD
Sbjct: 493 PIEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYD 552
Query: 274 VGPVPQHWEIPPST 233
GP+P+ WEIPPST
Sbjct: 553 FGPLPKLWEIPPST 566
>ref|XP_003549664.1| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1,
mitochondrial-like [Glycine max]
Length = 553
Score = 499 bits (1286), Expect(2) = 0.0
Identities = 239/287 (83%), Positives = 262/287 (91%)
Frame = -1
Query: 1874 RSLQTLSFATVEAEAISGSQPAEVHNLVQGCWKGTSNWNTLADPLNGEPFIRVAEVDETG 1695
R +L FATVEAE ISGS+ AEV NLVQG W G+SNWNT+ DPLNG+ FI+VAEVDETG
Sbjct: 28 RYAHSLPFATVEAEEISGSRAAEVLNLVQGKWVGSSNWNTVVDPLNGDSFIKVAEVDETG 87
Query: 1694 VKPFVDSLSKCPKSGLHNPFRSPERYLLYGDISTKAAHMLSQPEVSNFFTRLIQRVSPKS 1515
++PFV+SLS CPK G HNPF++PERYL++G+IS KAAHMLS P+V +FFTRLIQRVSPKS
Sbjct: 88 IQPFVESLSSCPKHGAHNPFKAPERYLMFGEISAKAAHMLSLPKVLDFFTRLIQRVSPKS 147
Query: 1514 YQQALAEVYVTQKFFENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVVIVTPFNFP 1335
YQQA EVYVTQKF ENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPV I+TPFNFP
Sbjct: 148 YQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFP 207
Query: 1334 LEIPVLQLMGALYMGNKPLLKVDSKVSVVMDQMLRLLHHCGLPMEDVDFINSDGKTMNKL 1155
LEIPVLQLMGALYMGNKP+LKVDSKVS+VM+QMLRLLH CGLP+EDVDFINSDGKTMNKL
Sbjct: 208 LEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPLEDVDFINSDGKTMNKL 267
Query: 1154 LLEAKPRMTLFTGSSRVAEKLAFDLKGRIKLEDAGFDWKILGPDVHE 1014
LLE PRMTLFTGSSRVAEKLA DLKGR+KLEDAGFDWKILGPDVH+
Sbjct: 268 LLEGNPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQ 314
Score = 432 bits (1112), Expect(2) = 0.0
Identities = 205/238 (86%), Positives = 222/238 (93%)
Frame = -2
Query: 946 DYVAWVCDQDAYACSGQKCSAQSILFMHENWASTDLISRMKSLAERRKLEDLTIGPVLTV 767
DYVAWVCDQDAYACSGQKCSAQS+LFMHENW+ T L+S++K LAERRKL DLTIGPVLTV
Sbjct: 316 DYVAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLADLTIGPVLTV 375
Query: 766 TTEAMLEHMNALLKIPGSKLLFGGEALENHSIPNIYGAIKPTAVYVPLDEILKDNNFELV 587
TT++MLEH+N LL+IPGSKLLFGG LENHSIP IYGAIKPTAVYVPL+EI+KD NFELV
Sbjct: 376 TTDSMLEHVNKLLEIPGSKLLFGGSPLENHSIPPIYGAIKPTAVYVPLEEIMKDKNFELV 435
Query: 586 TKEIFGPFQVVTDYKQDQLAKVLDALERMHAHLTAAVVSNDLLFLQEVIGRSVNGTTYAG 407
TKEIFGPFQV+TDY+ QLA VLDALERMH HLTAAVVSND LFLQEVIG+SVNGTTYAG
Sbjct: 436 TKEIFGPFQVITDYQNSQLAVVLDALERMHNHLTAAVVSNDPLFLQEVIGKSVNGTTYAG 495
Query: 406 LRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDVGPVPQHWEIPPST 233
LRARTTGAPQNHWFGPAGD RGAGIGTPEAIKLVWSCHREIIYD GPVP++WE+PPST
Sbjct: 496 LRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDFGPVPKNWEVPPST 553