BLASTX nr result

ID: Coptis25_contig00002883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002883
         (2176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   449   e-123
emb|CBI28315.3| unnamed protein product [Vitis vinifera]              446   e-122
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228...   433   e-118
ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218...   433   e-118
ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleop...   430   e-118

>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
            vinifera]
          Length = 503

 Score =  449 bits (1155), Expect = e-123
 Identities = 239/439 (54%), Positives = 286/439 (65%), Gaps = 6/439 (1%)
 Frame = +1

Query: 667  PVEPDEQVDLNGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSVDGAASQ 846
            P+E DE+VDL+ DND                                      V+    +
Sbjct: 26   PIESDERVDLDEDNDPDEAMDEEVEYEEVEVEEEVEEVEEEVEEEEVEEEEEEVEEEEEE 85

Query: 847  PKPSGDEETRA-----GKA-DEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSE 1008
             + +  +E ++     GK  DEDES KHAELL+LPPHGSEVYVGG+  DASE+DL+SF E
Sbjct: 86   EEANEADEQKSPSGGGGKIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCE 145

Query: 1009 SVGEIIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNR 1188
            SVGE+ EVRI+KGKDSGENKG+AFVTF++ ELASKAI +LNNTEFKGRKIKCS SQ K+R
Sbjct: 146  SVGEVTEVRIMKGKDSGENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHR 205

Query: 1189 LFIGNIPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQ 1368
            LFIGN+P+SW ++D++K            +LVKD +NS+ NRGFAFI+YYN ACAEY+RQ
Sbjct: 206  LFIGNVPRSWGEEDIKKVVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQ 265

Query: 1369 KMSNPEFKLDNNAPTVXXXXXXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEIT 1548
            KM NP+FKLDNNAPTV              QVKAVYVKNLPK+I QD+LK+LF+HHG+IT
Sbjct: 266  KMMNPKFKLDNNAPTVSWADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKIT 325

Query: 1549 KVVLPSAKSGKEGNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSDAG 1728
            KVVLP AKSG+E +RIGFVHFA+RSSAM +LKNTEKYEIDG VLECSLAKPQ D+ S  G
Sbjct: 326  KVVLPPAKSGQEKSRIGFVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGG 385

Query: 1729 STLQKSGLLPNYPPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXXXX 1908
            S  QKSGLL +YPP +                      QPL                   
Sbjct: 386  SNSQKSGLLSSYPPRVGYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLP 445

Query: 1909 DGRVAYVMQQPGVQLHTPP 1965
            DGR+ YV+QQPG Q HTPP
Sbjct: 446  DGRIGYVLQQPGAQPHTPP 464


>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  446 bits (1147), Expect = e-122
 Identities = 227/367 (61%), Positives = 264/367 (71%)
 Frame = +1

Query: 865  EETRAGKADEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGEIIEVRIVK 1044
            EE      DEDES KHAELL+LPPHGSEVYVGG+  DASE+DL+SF ESVGE+ EVRI+K
Sbjct: 29   EEEEEEIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMK 88

Query: 1045 GKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIGNIPKSWVK 1224
            GKDSGENKG+AFVTF++ ELASKAI +LNNTEFKGRKIKCS SQ K+RLFIGN+P+SW +
Sbjct: 89   GKDSGENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGE 148

Query: 1225 QDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSNPEFKLDNN 1404
            +D++K            +LVKD +NS+ NRGFAFI+YYN ACAEY+RQKM NP+FKLDNN
Sbjct: 149  EDIKKVVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNN 208

Query: 1405 APTVXXXXXXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKVVLPSAKSGKE 1584
            APTV              QVKAVYVKNLPK+I QD+LK+LF+HHG+ITKVVLP AKSG+E
Sbjct: 209  APTVSWADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQE 268

Query: 1585 GNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSDAGSTLQKSGLLPNY 1764
             +RIGFVHFA+RSSAM +LKNTEKYEIDG VLECSLAKPQ D+ S  GS  QKSGLL +Y
Sbjct: 269  KSRIGFVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSY 328

Query: 1765 PPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXXXXDGRVAYVMQQPG 1944
            PP +                      QPL                   DGR+ YV+QQPG
Sbjct: 329  PPRVGYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPG 388

Query: 1945 VQLHTPP 1965
             Q HTPP
Sbjct: 389  AQPHTPP 395


>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
          Length = 828

 Score =  433 bits (1113), Expect = e-118
 Identities = 217/359 (60%), Positives = 261/359 (72%)
 Frame = +1

Query: 889  DEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGEIIEVRIVKGKDSGENK 1068
            DEDE+ KHAELL+LPPHGSEVYVGG+P D+SEDDLR F ES+GE+ EVR+++ K+S ENK
Sbjct: 421  DEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENK 480

Query: 1069 GYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIGNIPKSWVKQDLEKXXX 1248
            G+AFVTF+S ELASKAI +LNNTEFKG+KIKCS+SQ K+RLFIGN+P+SW ++DL+K   
Sbjct: 481  GFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVT 540

Query: 1249 XXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSNPEFKLDNNAPTVXXXX 1428
                     +LVKD +N++ NRGFAFI+YYN ACAEY+RQKM NP+FKLD+NAPTV    
Sbjct: 541  EIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWAD 600

Query: 1429 XXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKVVLPSAKSGKEGNRIGFVH 1608
                      QVKAVYVKNLPK++ Q++LKKLF HHG+ITKVVLP AKSG+E NRIGFVH
Sbjct: 601  PKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVH 660

Query: 1609 FAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSDAGSTLQKSGLLPNYPPPIXXXX 1788
            F++RSSAM +LKNTEKYE+DG VLECSLAKPQ D+ S  GS  QKSGLLPNYPP +    
Sbjct: 661  FSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKS-GGSNSQKSGLLPNYPPRVGYGF 719

Query: 1789 XXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXXXXDGRVAYVMQQPGVQLHTPP 1965
                              QPL                   DGR+ YV+QQPG Q+ TPP
Sbjct: 720  VGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPP 778


>ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
          Length = 784

 Score =  433 bits (1113), Expect = e-118
 Identities = 217/359 (60%), Positives = 261/359 (72%)
 Frame = +1

Query: 889  DEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGEIIEVRIVKGKDSGENK 1068
            DEDE+ KHAELL+LPPHGSEVYVGG+P D+SEDDLR F ES+GE+ EVR+++ K+S ENK
Sbjct: 377  DEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENK 436

Query: 1069 GYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIGNIPKSWVKQDLEKXXX 1248
            G+AFVTF+S ELASKAI +LNNTEFKG+KIKCS+SQ K+RLFIGN+P+SW ++DL+K   
Sbjct: 437  GFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVT 496

Query: 1249 XXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSNPEFKLDNNAPTVXXXX 1428
                     +LVKD +N++ NRGFAFI+YYN ACAEY+RQKM NP+FKLD+NAPTV    
Sbjct: 497  EIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWAD 556

Query: 1429 XXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKVVLPSAKSGKEGNRIGFVH 1608
                      QVKAVYVKNLPK++ Q++LKKLF HHG+ITKVVLP AKSG+E NRIGFVH
Sbjct: 557  PKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVH 616

Query: 1609 FAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSDAGSTLQKSGLLPNYPPPIXXXX 1788
            F++RSSAM +LKNTEKYE+DG VLECSLAKPQ D+ S  GS  QKSGLLPNYPP +    
Sbjct: 617  FSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKS-GGSNSQKSGLLPNYPPRVGYGF 675

Query: 1789 XXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXXXXDGRVAYVMQQPGVQLHTPP 1965
                              QPL                   DGR+ YV+QQPG Q+ TPP
Sbjct: 676  VGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPP 734


>ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis vinifera]
          Length = 490

 Score =  430 bits (1105), Expect = e-118
 Identities = 227/435 (52%), Positives = 280/435 (64%), Gaps = 2/435 (0%)
 Frame = +1

Query: 667  PVEPDEQVDLNGDN-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSVDGAAS 843
            P EP+E+VDL+GDN D                                         A +
Sbjct: 27   PAEPEERVDLDGDNEDTKEEEVESEEVEEEVEEIEEEEEEEVEEEVEEDEEEEDTYFADA 86

Query: 844  QPKPSGDEETRAGKADED-ESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGE 1020
            Q  P GD+E ++ K + D E+ +HAELL+LPPHGSEVY+GG+P++ASE+DLR F E VGE
Sbjct: 87   QKDPDGDDEIKSAKGEVDNENRRHAELLALPPHGSEVYLGGIPNNASEEDLRGFCEPVGE 146

Query: 1021 IIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIG 1200
            + EVRI+KGKDS E KGYAFVTF++KELASKA+ +LNN E KGRKIKCSASQVK+RLFI 
Sbjct: 147  VTEVRILKGKDSAETKGYAFVTFRTKELASKAMEELNNAEIKGRKIKCSASQVKHRLFIS 206

Query: 1201 NIPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSN 1380
            N+P++W ++D++K            DL KDPQNS+RNRGFAFIEYYN ACAEY+R+KMSN
Sbjct: 207  NVPRTWEEEDMKKVVTEIGPGVNLVDLWKDPQNSSRNRGFAFIEYYNHACAEYSRKKMSN 266

Query: 1381 PEFKLDNNAPTVXXXXXXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKVVL 1560
            P+FKLDNNA TV              QVKAVY+KNLPK + QD+L++LF  HG+ITKVV+
Sbjct: 267  PKFKLDNNASTVSWADPKNVESSAASQVKAVYIKNLPKYMTQDQLRELFGQHGKITKVVI 326

Query: 1561 PSAKSGKEGNRIGFVHFAQRSSAMISLKNTEKYEIDGHVLECSLAKPQPDRVSDAGSTLQ 1740
            P AK+G+E  R GFVHFA+RSSAM +LKNTEKYEIDGH+L CSLAKPQ D+    GS  Q
Sbjct: 327  PPAKAGQENCRFGFVHFAERSSAMKALKNTEKYEIDGHILGCSLAKPQADKKFSGGSNSQ 386

Query: 1741 KSGLLPNYPPPIXXXXXXXXXXXXXXXXXXXXIPQPLXXXXXXXXXXXXXXXXXXXDGRV 1920
            KS LLP+YPP +                      QPL                   DGR+
Sbjct: 387  KSALLPSYPPWV---GYGLLGGAPGAGYGAAGFGQPLTYGRGLTSAGTAMMPMLLPDGRI 443

Query: 1921 AYVMQQPGVQLHTPP 1965
             YV+QQPG+Q +TPP
Sbjct: 444  GYVLQQPGMQPYTPP 458


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