BLASTX nr result

ID: Coptis25_contig00002882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002882
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241518.1| uncharacterized protein LOC100788713 [Glycin...   176   2e-42
ref|XP_003597730.1| Cornifelin-like protein [Medicago truncatula...   174   6e-42
gb|AFK47807.1| unknown [Lotus japonicus]                              171   5e-41
ref|XP_002894363.1| hypothetical protein ARALYDRAFT_892219 [Arab...   163   2e-38
gb|AAM62872.1| unknown [Arabidopsis thaliana]                         159   2e-37

>ref|NP_001241518.1| uncharacterized protein LOC100788713 [Glycine max]
           gi|255640548|gb|ACU20559.1| unknown [Glycine max]
          Length = 168

 Score =  176 bits (447), Expect = 2e-42
 Identities = 85/144 (59%), Positives = 98/144 (68%)
 Frame = +1

Query: 10  QIGEPWKTGLFDCQLNPANAIMTAFLPCATFGKIAVVLDGGKMTRHXXXXXXXXXXXXXX 189
           QIG PW TGLFDC  N  NA+MTAF PC TFG+IA V DGG+++ H              
Sbjct: 29  QIGNPWSTGLFDCHENQTNAVMTAFFPCVTFGQIAEVQDGGELSCHLGSFIYLLMMPALC 88

Query: 190 XQVVMGSKYRAKLRKKFNLVEAPYGDCFSHVFCSCCSLCQEFRELQSRGLDPNLGWNELL 369
            Q +MGSKYR KLRK++NLVEAPY D  SH+FC CCSLCQEFREL+ RGLDP LGWN +L
Sbjct: 89  SQWIMGSKYRTKLRKRYNLVEAPYTDIVSHIFCPCCSLCQEFRELKIRGLDPALGWNGIL 148

Query: 370 AQQAMQQGYPDQVQQPPHNQTMSK 441
           AQQ   Q     ++ PP NQ MSK
Sbjct: 149 AQQQSDQ----TLKNPPLNQVMSK 168


>ref|XP_003597730.1| Cornifelin-like protein [Medicago truncatula]
           gi|87240433|gb|ABD32291.1| Uncharacterized Cys-rich
           domain [Medicago truncatula] gi|355486778|gb|AES67981.1|
           Cornifelin-like protein [Medicago truncatula]
           gi|388495596|gb|AFK35864.1| unknown [Medicago
           truncatula]
          Length = 171

 Score =  174 bits (442), Expect = 6e-42
 Identities = 83/147 (56%), Positives = 98/147 (66%)
 Frame = +1

Query: 1   VQNQIGEPWKTGLFDCQLNPANAIMTAFLPCATFGKIAVVLDGGKMTRHXXXXXXXXXXX 180
           +Q  +G PW TGLFDC  N  NAIMTAFLPC TFG+IA VLDGG+++ H           
Sbjct: 25  IQQVVGSPWSTGLFDCHENQTNAIMTAFLPCVTFGQIAEVLDGGELSCHLGSFIYLLMMP 84

Query: 181 XXXXQVVMGSKYRAKLRKKFNLVEAPYGDCFSHVFCSCCSLCQEFRELQSRGLDPNLGWN 360
               Q +MGSKYR KLRKK++LVEAP+ D  SH+FC CCSLCQEFREL+ RGLDP LGWN
Sbjct: 85  ALCTQWIMGSKYRTKLRKKYDLVEAPHTDVISHIFCPCCSLCQEFRELKIRGLDPALGWN 144

Query: 361 ELLAQQAMQQGYPDQVQQPPHNQTMSK 441
            +LA Q  +      +  PP  Q MSK
Sbjct: 145 GILALQHSKHQSDPTLNNPPSTQFMSK 171


>gb|AFK47807.1| unknown [Lotus japonicus]
          Length = 170

 Score =  171 bits (434), Expect = 5e-41
 Identities = 82/144 (56%), Positives = 99/144 (68%), Gaps = 1/144 (0%)
 Frame = +1

Query: 10  QIGEPWKTGLFDCQLNPANAIMTAFLPCATFGKIAVVLDGGKMTRHXXXXXXXXXXXXXX 189
           Q+G+PW TGLFDC  N  NA+MT+FLPC  FG+IA VLDGG+++                
Sbjct: 26  QVGKPWSTGLFDCHENQTNAVMTSFLPCVQFGQIAEVLDGGELSCPLGSFIYLLMMPALC 85

Query: 190 XQVVMGSKYRAKLRKKFNLVEAPYGDCFSHVFCSCCSLCQEFRELQSRGLDPNLGWNELL 369
            Q +MGSKYR KLRKK++LVEAPY D  SHVFC CCSLCQEFREL+ RGLDP LGWN +L
Sbjct: 86  TQWIMGSKYRTKLRKKYDLVEAPYSDVISHVFCPCCSLCQEFRELKIRGLDPALGWNGIL 145

Query: 370 AQQAMQQGYPDQ-VQQPPHNQTMS 438
           A+Q  ++    Q +  PP NQ MS
Sbjct: 146 AEQQRERQQNGQTLNDPPSNQAMS 169


>ref|XP_002894363.1| hypothetical protein ARALYDRAFT_892219 [Arabidopsis lyrata subsp.
           lyrata] gi|297340205|gb|EFH70622.1| hypothetical protein
           ARALYDRAFT_892219 [Arabidopsis lyrata subsp. lyrata]
          Length = 188

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/147 (55%), Positives = 97/147 (65%)
 Frame = +1

Query: 1   VQNQIGEPWKTGLFDCQLNPANAIMTAFLPCATFGKIAVVLDGGKMTRHXXXXXXXXXXX 180
           V   +G P+ TGLFDCQ +  NAIMTA LPC TFG+IA VLD G+ T             
Sbjct: 45  VNLSVGRPFSTGLFDCQADQTNAIMTAILPCVTFGQIAEVLDEGETTCPLGSFIYLLMMP 104

Query: 181 XXXXQVVMGSKYRAKLRKKFNLVEAPYGDCFSHVFCSCCSLCQEFRELQSRGLDPNLGWN 360
               Q VMGSKYR K+R+KFNLVEAPY DC SHV C CCSLCQE+REL++R LDP+LGWN
Sbjct: 105 ALCSQWVMGSKYREKIRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKARNLDPSLGWN 164

Query: 361 ELLAQQAMQQGYPDQVQQPPHNQTMSK 441
            +LAQ+  +   P+     P NQ MSK
Sbjct: 165 GILAQRQYESEAPNFA---PTNQYMSK 188


>gb|AAM62872.1| unknown [Arabidopsis thaliana]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/147 (53%), Positives = 94/147 (63%)
 Frame = +1

Query: 1   VQNQIGEPWKTGLFDCQLNPANAIMTAFLPCATFGKIAVVLDGGKMTRHXXXXXXXXXXX 180
           V   +G PW TGLFDCQ + ANA++T  +PC TFG+IA V+D G+MT             
Sbjct: 45  VNLSVGRPWSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMP 104

Query: 181 XXXXQVVMGSKYRAKLRKKFNLVEAPYGDCFSHVFCSCCSLCQEFRELQSRGLDPNLGWN 360
                 VMGSKYR K+R+KFNLVEAPY DC SHV C CCSLCQE+REL+ R LDP+LGWN
Sbjct: 105 ALCSHWVMGSKYREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKIRNLDPSLGWN 164

Query: 361 ELLAQQAMQQGYPDQVQQPPHNQTMSK 441
            +LA Q   Q   +     P NQ MSK
Sbjct: 165 GILA-QGQGQYESEAPSFAPTNQYMSK 190


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