BLASTX nr result

ID: Coptis25_contig00002873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002873
         (2556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]     267   1e-68
ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]     267   1e-68
ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductas...   260   1e-66
ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|2...   258   7e-66
ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatul...   256   2e-65

>ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 559

 Score =  267 bits (682), Expect = 1e-68
 Identities = 142/275 (51%), Positives = 194/275 (70%), Gaps = 3/275 (1%)
 Frame = -2

Query: 818 YTRTNKEYIARSGWDENLVKEAYEWVESRVVFEP-NLSEQQSFARDAFVAAGNVPFNGYS 642
           Y+R ++E++ ++GWD+ LVKEAYEWVES+VVF P  LS  QS A  + + AG +P+NG+S
Sbjct: 157 YSRASEEFVCKAGWDKELVKEAYEWVESKVVFPPFYLSPWQSVAEFSILEAGVLPYNGFS 216

Query: 641 LEHVEGTKITGTIFDENGVRHCSAHLLHAGDPERLTVLLNATVKSIIFSQGDG-TKPRAC 465
           LEH++GTKI+G++FDE G RH SA LL+AG+P  LTVLLNATVKSIIF       + RA 
Sbjct: 217 LEHIKGTKISGSVFDEFGKRHTSADLLNAGNPNNLTVLLNATVKSIIFHHSSNRNETRAK 276

Query: 464 GIRFIKSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILMLSGIGPSELLSKFNI 285
           GIRFI+S+  LD +YE  +N A +S S+GDV+L+AGA+GSPQ++MLSGIGP E L +FNI
Sbjct: 277 GIRFIQSNGTLDETYEAYINKAKNSSSKGDVILAAGALGSPQLMMLSGIGPKEQLRRFNI 336

Query: 284 APMIDAPQVGQDIRDHPGIHFLLDAGIGNEGQADTSQVVGIASSSRFLFQYGGSKASGRP 105
           + + +   VGQ ++D+P I  L+D+   N    D  Q+ GI    + + +      +   
Sbjct: 337 SIVHEMKGVGQGMQDNPCIAVLVDSKPQNR-LPDPPQIAGITDDFKIIVEASILPLTSNS 395

Query: 104 IRV-LRGKLAYPSSKGKLELNSTDPRKNPSVRYNY 3
            RV +  K+A P+SKG LELN+TDPR NPSVR+NY
Sbjct: 396 SRVNVAAKIAMPTSKGMLELNNTDPRLNPSVRFNY 430



 Score = 96.7 bits (239), Expect = 3e-17
 Identities = 47/99 (47%), Positives = 69/99 (69%)
 Frame = -1

Query: 1242 LFKAPKVLHLSKFSYSSPLIMSQGHGTLNIISDVEQVQGKSYDYIVVGGGTSGCPLAATL 1063
            L  A  +  L+    S PL     +   ++ SDV+QV GKSYDYI+VGGGT GCPLAATL
Sbjct: 29   LLTAFVLFFLASLGLSFPLEPPGNNRQWHMTSDVKQVAGKSYDYIIVGGGTCGCPLAATL 88

Query: 1062 SKRFTVLLVERGGSPFGDPLIMEKKNFFRPMSQIDEFTS 946
            S+ F+VLL+ERG SP+G+PL+++++ +  P+ + D++ S
Sbjct: 89   SQDFSVLLIERGSSPYGNPLVIDRRYYGFPLIKTDKYMS 127


>ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 502

 Score =  267 bits (682), Expect = 1e-68
 Identities = 143/275 (52%), Positives = 194/275 (70%), Gaps = 3/275 (1%)
 Frame = -2

Query: 818 YTRTNKEYIARSGWDENLVKEAYEWVESRVVFEP-NLSEQQSFARDAFVAAGNVPFNGYS 642
           Y+R ++E++ ++GWD+ LVKEAYEWVES+VVF P  LS  QS A  + + AG +P+NG+S
Sbjct: 100 YSRASEEFVCKAGWDKELVKEAYEWVESKVVFPPFYLSPWQSVAEFSILEAGVLPYNGFS 159

Query: 641 LEHVEGTKITGTIFDENGVRHCSAHLLHAGDPERLTVLLNATVKSIIFSQGD-GTKPRAC 465
           LEH++GTKI+G++FDE G RH SA LL+AG+P+ LTVLLNATVKSIIF       + RA 
Sbjct: 160 LEHIKGTKISGSVFDEFGKRHTSADLLNAGNPKNLTVLLNATVKSIIFHHSSYRNETRAK 219

Query: 464 GIRFIKSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILMLSGIGPSELLSKFNI 285
           GIRFI+S+  LD +YE  +N A +S S GDV+L+AGA+GSPQ++MLSGIGP E L +FNI
Sbjct: 220 GIRFIQSNGTLDETYEAYINKAKNSSSRGDVILAAGALGSPQLMMLSGIGPKEQLRRFNI 279

Query: 284 APMIDAPQVGQDIRDHPGIHFLLDAGIGNEGQADTSQVVGIASSSRFLFQYGGSKASGRP 105
           + + +   VGQ ++D+P I  L+D+   N    D  Q+ GI    + + +      S   
Sbjct: 280 SIVREMKGVGQGMQDNPCIAVLVDSKPQNR-LPDPPQIAGITDDFKIIVEASIFPLSSNS 338

Query: 104 IRV-LRGKLAYPSSKGKLELNSTDPRKNPSVRYNY 3
            RV +  K+A P+SKG LELN+TDPR NPSVR+NY
Sbjct: 339 SRVNVAAKIAMPTSKGVLELNNTDPRLNPSVRFNY 373



 Score = 96.7 bits (239), Expect = 3e-17
 Identities = 41/68 (60%), Positives = 60/68 (88%)
 Frame = -1

Query: 1149 SDVEQVQGKSYDYIVVGGGTSGCPLAATLSKRFTVLLVERGGSPFGDPLIMEKKNFFRPM 970
            SDV++V GKSYDYI+VGGGT GCPLAATLS++F+VLL+ERGGSP+G+PL+++++ +  P+
Sbjct: 3    SDVKEVAGKSYDYIIVGGGTCGCPLAATLSEKFSVLLIERGGSPYGNPLVIDRRYYGFPL 62

Query: 969  SQIDEFTS 946
             + D++ S
Sbjct: 63   IKTDKYMS 70


>ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus
           communis] gi|223538333|gb|EEF39940.1|
           glucose-methanol-choline (gmc) oxidoreductase, putative
           [Ricinus communis]
          Length = 537

 Score =  260 bits (665), Expect = 1e-66
 Identities = 145/277 (52%), Positives = 185/277 (66%), Gaps = 5/277 (1%)
 Frame = -2

Query: 818 YTRTNKEYIARSGWDENLVKEAYEWVESRVVFEPNLSEQQSFARDAFVAAGNVPFNGYSL 639
           Y+R + +++ R GWDE LVKEAYEWVES++VF P LS  QS      + AG +P+NG+S 
Sbjct: 137 YSRASNDFVKRIGWDEELVKEAYEWVESKIVFRPELSIWQSVLEFGLLEAGFLPYNGFSW 196

Query: 638 EHVEGTKITGTIFDENGVRHCSAHLLHAGDPERLTVLLNATVKSIIF-SQGDGTKPRACG 462
           +H+EGTKI GT +DE GVRH SA LL AG+ E +TVLL ATVK+IIF + G   +  A G
Sbjct: 197 DHIEGTKIGGTTYDEFGVRHTSADLLGAGNLENITVLLYATVKNIIFHNNGSENERIAHG 256

Query: 461 IRFIKSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILMLSGIGPSELLSKFNIA 282
           IRFIKS+   D  YE  LN   +S S GDV+LSAGA+GSPQILMLSGIGP + L  F+I 
Sbjct: 257 IRFIKSNGSTDQIYEAYLNQPKNSSSWGDVILSAGALGSPQILMLSGIGPQKHLKNFSIP 316

Query: 281 PMIDAPQVGQDIRDHPGIHFLLDAGIGNEGQADTSQVVGIASSSRFLFQYG----GSKAS 114
            + D   VGQ+++D+P I  L D         DT QVVGIA   +F+ + G       A+
Sbjct: 317 LVWDLKGVGQEMKDNPAIALLADTN-AEYRLPDTPQVVGIAKDFKFIVEGGILPISFNAT 375

Query: 113 GRPIRVLRGKLAYPSSKGKLELNSTDPRKNPSVRYNY 3
             PI V   KLA+P SKGKL+L +TDPR+NP V++NY
Sbjct: 376 RMPIAV---KLAFPESKGKLKLYNTDPRQNPLVKFNY 409



 Score =  104 bits (259), Expect = 1e-19
 Identities = 54/90 (60%), Positives = 67/90 (74%)
 Frame = -1

Query: 1215 LSKFSYSSPLIMSQGHGTLNIISDVEQVQGKSYDYIVVGGGTSGCPLAATLSKRFTVLLV 1036
            L   S SSPL+  QG     + SDV +V GKS+DYIVVGGGT+GCPLAATLS+RF+VLLV
Sbjct: 20   LVNLSKSSPLL--QGKSIPYMTSDVNEVSGKSFDYIVVGGGTAGCPLAATLSERFSVLLV 77

Query: 1035 ERGGSPFGDPLIMEKKNFFRPMSQIDEFTS 946
            ERGGSP+G+PL+  K  +   + Q DEF+S
Sbjct: 78   ERGGSPYGNPLVWNKMYYGFALLQTDEFSS 107


>ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|222864087|gb|EEF01218.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  258 bits (658), Expect = 7e-66
 Identities = 137/276 (49%), Positives = 181/276 (65%), Gaps = 4/276 (1%)
 Frame = -2

Query: 818 YTRTNKEYIARSGWDENLVKEAYEWVESRVVFEPNLSEQQSFARDAFVAAGNVPFNGYSL 639
           Y+R + +++   GWDE LVKEAYEWVES +VF+P L+  QS      + AG +P+NG+S+
Sbjct: 106 YSRASDDFVKTVGWDEELVKEAYEWVESNIVFKPELTIWQSVVELGLLEAGILPYNGFSM 165

Query: 638 EHVEGTKITGTIFDENGVRHCSAHLLHAGDPERLTVLLNATVKSIIFSQGDGTKPRACGI 459
           EH+EGTKI GT+FDE G+RH SA LL  G+PE + VLLNATVK+IIF    G +    G+
Sbjct: 166 EHIEGTKIGGTLFDEYGIRHTSADLLEIGNPENIIVLLNATVKNIIF---HGNESMVRGV 222

Query: 458 RFIKSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILMLSGIGPSELLSKFNIAP 279
           RFIKS      +YE  LN   +S S GDV+LSAGA+GSPQIL+LSGIGP + L  F I  
Sbjct: 223 RFIKSDGSTSQTYEAYLNQPENSSSWGDVILSAGALGSPQILLLSGIGPEKHLRNFGIPL 282

Query: 278 MIDAPQVGQDIRDHPGIHFLLDAGIGNEGQADTSQVVGIASSSRFLFQYG----GSKASG 111
           ++D   VG++++D+PGI  L D         D  QV GI    +F+ + G       A+ 
Sbjct: 283 VLDLKGVGKEMKDNPGIALLADTK-PTHRFPDAPQVAGITKDMKFIVEGGIVPISFNATR 341

Query: 110 RPIRVLRGKLAYPSSKGKLELNSTDPRKNPSVRYNY 3
            PI +   KLA+P SKG LELNSTDPR+NP+V ++Y
Sbjct: 342 MPIAI---KLAFPESKGTLELNSTDPRQNPAVEFHY 374



 Score =  102 bits (253), Expect = 7e-19
 Identities = 46/70 (65%), Positives = 61/70 (87%)
 Frame = -1

Query: 1155 IISDVEQVQGKSYDYIVVGGGTSGCPLAATLSKRFTVLLVERGGSPFGDPLIMEKKNFFR 976
            + SDVE+V GKS+DYIVVGGGT+GCPLAATLS+RF+VL++ERGGSP+G+PL+ +K  +  
Sbjct: 7    LTSDVEEVSGKSFDYIVVGGGTAGCPLAATLSERFSVLVIERGGSPYGNPLVSDKMYYGF 66

Query: 975  PMSQIDEFTS 946
            P+ Q DEF+S
Sbjct: 67   PLIQPDEFSS 76


>ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatula]
           gi|355515154|gb|AES96777.1| (R)-mandelonitrile lyase
           [Medicago truncatula]
          Length = 543

 Score =  256 bits (655), Expect = 2e-65
 Identities = 140/275 (50%), Positives = 186/275 (67%), Gaps = 3/275 (1%)
 Frame = -2

Query: 818 YTRTNKEYIARSGWDENLVKEAYEWVESRVVFEPN-LSEQQSFARDAFVAAGNVPFNGYS 642
           Y+R + E++ + GWD+ LVKEAYEWVES+VVF P  L+  QS A  + +  G +P+NGYS
Sbjct: 142 YSRASDEFVDKVGWDKKLVKEAYEWVESKVVFPPFFLTPWQSVAEFSLLETGILPYNGYS 201

Query: 641 LEHVEGTKITGTIFDENGVRHCSAHLLHAGDPERLTVLLNATVKSIIFS-QGDGTKPRAC 465
           LEH+ GTKI+G++FD  G RH SA LL AG+P+ LTVL+NATVK IIF   GD  + RA 
Sbjct: 202 LEHIRGTKISGSVFDGFGKRHTSADLLEAGNPKNLTVLVNATVKKIIFHYNGDKNETRAK 261

Query: 464 GIRFIKSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILMLSGIGPSELLSKFNI 285
           GI+FIKS+  LD +YE  +   + S S GDV+LSAGA+GSPQ+L+LSGIGP E L KFNI
Sbjct: 262 GIKFIKSNGSLDETYEAFIKKPNHSTSRGDVILSAGALGSPQLLLLSGIGPKEQLKKFNI 321

Query: 284 APMIDAPQVGQDIRDHPGIHFLLDAGIGNEGQADTSQVVGIASSSRFLFQYGGSKASGRP 105
             + +  QVGQ ++D+P I  L+D+   N    D  Q+ GI    + + +      S   
Sbjct: 322 PLVHEMKQVGQGMQDNPCIAILVDSKPENR-LPDPPQIAGITEDLKIIVEASILPLSINE 380

Query: 104 IRV-LRGKLAYPSSKGKLELNSTDPRKNPSVRYNY 3
            RV +  K+A P SKG LELN+TDPR NP+V++NY
Sbjct: 381 SRVNIAAKIAMPLSKGYLELNNTDPRLNPTVKFNY 415



 Score = 98.6 bits (244), Expect = 7e-18
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = -1

Query: 1251 LIQLFKAPKVLHLSKFSYSSPLIMSQGHGTLNIISDVEQVQGKSYDYIVVGGGTSGCPLA 1072
            LI +F    VL    FS+ S     QG    ++ SDV++V GKSYDYI+VGGGT GCPLA
Sbjct: 13   LIVVFLLLIVLANCGFSFPSE---PQGKRQWHMTSDVKEVAGKSYDYIIVGGGTCGCPLA 69

Query: 1071 ATLSKRFTVLLVERGGSPFGDPLIMEKKNFFRPMSQID 958
            ATLS++F+VLL+ERGGSP+G+PL+++++ +  P+ Q D
Sbjct: 70   ATLSEKFSVLLIERGGSPYGNPLVIDRRYYGFPLIQKD 107


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