BLASTX nr result

ID: Coptis25_contig00002855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002855
         (1737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269144.1| PREDICTED: uncharacterized protein LOC100248...   320   7e-85
ref|XP_002520157.1| conserved hypothetical protein [Ricinus comm...   310   8e-82
ref|XP_002312704.1| predicted protein [Populus trichocarpa] gi|2...   306   1e-80
emb|CBI32031.3| unnamed protein product [Vitis vinifera]              301   4e-79
ref|XP_003613550.1| hypothetical protein MTR_5g037960 [Medicago ...   269   2e-69

>ref|XP_002269144.1| PREDICTED: uncharacterized protein LOC100248339 [Vitis vinifera]
          Length = 444

 Score =  320 bits (820), Expect = 7e-85
 Identities = 186/442 (42%), Positives = 242/442 (54%), Gaps = 29/442 (6%)
 Frame = +2

Query: 152  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 331
            ++  TDGPV+S +NKRLR L+KKYN+I Q+EEA +QGKPINK+QE+VL++KP++  LIDE
Sbjct: 3    ASDVTDGPVLSLINKRLRGLRKKYNRITQMEEAIAQGKPINKEQEDVLRSKPAVTVLIDE 62

Query: 332  YEKLRQPLYTVVQEEVFL----NNKPXXXXXXXXXXXXXXXXXXXXX------------- 460
             E+LRQPL   V+EE+ L    N+ P                                  
Sbjct: 63   LERLRQPLSAAVEEELSLALQSNHLPPSPPPQPSSIINKDGADDGEEKPESDHLNVENLL 122

Query: 461  ---YFSCLFDVKQQSDFTSTMLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLV 631
               YF  LFDVK Q+DFTSTMLTRTHERGCCLTYDYVT             +IS L GL+
Sbjct: 123  NLLYFGYLFDVKPQTDFTSTMLTRTHERGCCLTYDYVTDDATDLLGERDLDLISQLSGLL 182

Query: 632  VSRPVNSSLSHKNALRSCVEHAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTS 811
            +SRPV+SSLSHKNAL+ C+EHA+LWL NSD+ I+    +TY GLRE+L KI+ASDYFTT+
Sbjct: 183  ISRPVDSSLSHKNALQRCIEHARLWLANSDRPIEPDATVTYAGLREKLNKIMASDYFTTT 242

Query: 812  PEMKXXXXXXXXXGKYAPSNVAXXXXXXXXXXXXXXXXDFAQYEQKDEETENFEGQEAGA 991
            PEMK            A + V+                  AQY+QKDE+  N +G E G 
Sbjct: 243  PEMKAPVEVAAAAA--AGNYVSFQVPLHSSVVPVQVEGSIAQYQQKDEDNSNVQGHETGD 300

Query: 992  EQSIPVEELSKDESEMANAVEIIS------DHKPEVDGEEQNMETKDHQYGQRRDYHN-- 1147
            +QS PVEEL +DE E+ N  E++S        + EV+  + ++E+K+ QY  RR+Y N  
Sbjct: 301  DQSSPVEELHQDELEIENPAEVVSVQQEQAKQQAEVEWSQGDVESKE-QYVPRRNYQNTR 359

Query: 1148 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYDQPGGYYPKNYYNTXXXXXXXX 1327
                                                +YDQPG YY + Y+N         
Sbjct: 360  GGRGGGGSGRRGGYPNGRGGRSGGRVGGSYQNGRSQYYDQPGNYYSRGYHNNRGRGGRGA 419

Query: 1328 XXNAFNNHG-SAQGGHAPADEG 1390
              N++NNH    QGGHAP + G
Sbjct: 420  GGNSYNNHVLGIQGGHAPTEVG 441


>ref|XP_002520157.1| conserved hypothetical protein [Ricinus communis]
            gi|223540649|gb|EEF42212.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 440

 Score =  310 bits (794), Expect = 8e-82
 Identities = 180/434 (41%), Positives = 232/434 (53%), Gaps = 21/434 (4%)
 Frame = +2

Query: 152  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 331
            S+  T+GPV++ +NKRLRAL+KKYN+I+Q+EE+ SQGKPINK+QE+VL++KP +   I+E
Sbjct: 6    SSEATEGPVLNLINKRLRALRKKYNRIIQMEESISQGKPINKEQEDVLRSKPYVTASIEE 65

Query: 332  YEKLRQPLYTVVQEEVFL------------NNKPXXXXXXXXXXXXXXXXXXXXXYFSCL 475
             EKL+QPL   V EE+ L            +                        YF  L
Sbjct: 66   LEKLKQPLSVAVSEEIDLAIQRQQQQSSSSDRTTNEANGDSNGGGLAIEDLLNLLYFGSL 125

Query: 476  FDVKQQSDFTSTMLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSS 655
            FDVK Q++FT+TMLTRTHERGCCLTYDYVT             +IS LG L++SRPV+SS
Sbjct: 126  FDVKSQNEFTATMLTRTHERGCCLTYDYVTDDATDLLGERDLDMISKLGALLISRPVDSS 185

Query: 656  LSHKNALRSCVEHAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMK--XX 829
            LSHKNAL  C+EHAKLWL NSD+ ID    ++Y GLRERL KI+ASDYF T+PEMK    
Sbjct: 186  LSHKNALVKCIEHAKLWLSNSDQFIDPIANVSYSGLRERLNKIMASDYFITTPEMKAPVE 245

Query: 830  XXXXXXXGKYAPSNVAXXXXXXXXXXXXXXXXDFAQYEQKDEETENFEGQEAGAEQSIPV 1009
                   G YA   V                 D  ++ +++E+T NF+G E+G +QS P 
Sbjct: 246  VAAAAAAGNYASFQVPVHGVGPISVPVQVEGSD--EHYEENEDTGNFQGHESGDDQSNPA 303

Query: 1010 EELSKDESEMANAVEIISDHKP-----EVDGEEQNMETKDHQYGQRRDYHNXXXXXXXXX 1174
            EE  KD+ E     E +S  K      EVD  ++ ++ K+ QY  RR+Y N         
Sbjct: 304  EEFHKDDPETVVPAEEVSGEKEQEKPLEVDNIQKEVDPKEQQYFARRNYQNQRGGRGGNG 363

Query: 1175 XXXXXXXXXXXXXXXXXXXXXXXXXXXH-YDQPGGYYPKNYYNTXXXXXXXXXXNAFNNH 1351
                                         YDQ G YY +NYYN           + +NNH
Sbjct: 364  GGRRGYSNGRGGRSSGRGGGGYQNGRNQFYDQSGNYYQRNYYNNRGRGGGRGGGHPYNNH 423

Query: 1352 GSA-QGGHAPADEG 1390
            GSA  GGH PA  G
Sbjct: 424  GSAVHGGHGPAGVG 437


>ref|XP_002312704.1| predicted protein [Populus trichocarpa] gi|222852524|gb|EEE90071.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  306 bits (783), Expect = 1e-80
 Identities = 184/435 (42%), Positives = 231/435 (53%), Gaps = 26/435 (5%)
 Frame = +2

Query: 164  TDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDEYEKL 343
            T+GPV+S + KRLR LKKK+N+I+Q+EE+ +QGKPINK+QE+ L++KPS+   IDE EKL
Sbjct: 10   TEGPVLSLITKRLRGLKKKFNRIVQMEESIAQGKPINKEQEDFLRSKPSVAAAIDELEKL 69

Query: 344  RQPLYTVVQEEVFLN----NKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTST 511
            RQPL   V EE+ L     N                       YF CLFDV+ Q+DFT+T
Sbjct: 70   RQPLSVAVSEEIELAAHRLNPKSDSTVVPEASNGVVEDLLHLFYFGCLFDVRSQNDFTAT 129

Query: 512  MLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGG-LVVSRPVNSSLSHKNALRSCV 688
            MLTRTHERGCCLTYDYVT             +IS+LGG L++SRPVNSSLSHKNAL+ C+
Sbjct: 130  MLTRTHERGCCLTYDYVTDDATDLLSERDLDMISILGGGLIISRPVNSSLSHKNALQRCM 189

Query: 689  EHAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMKXXXXXXXXXGKYAPS 868
            EHAKLWL NSD+ ID    ++Y  LRE+L KI+ASDYFTT+PE+K         G Y P 
Sbjct: 190  EHAKLWLANSDQPIDSNVNVSYAELREKLNKIMASDYFTTTPEIKAPVEMAAAAGNYVPF 249

Query: 869  NVAXXXXXXXXXXXXXXXXDFAQYEQKDEETENFEGQEAGAEQSIPVEELSKDESEMANA 1048
             V                   AQY+ K++ETEN +  E G +QS P EEL KDE E  N 
Sbjct: 250  QV--------PFSVHMDEDSVAQYQPKEQETENIQ-HETGDDQSSPAEELQKDEQETENP 300

Query: 1049 VEIISDHKP--------------------EVDGEEQNMETKDHQYGQRRDYHN-XXXXXX 1165
              ++SD +                     EVD  ++  E K+ QY  RR+Y N       
Sbjct: 301  A-VVSDQEEQDNPSTEVEVYYNQREVEHGEVDHNQREAEPKEQQYVSRRNYQNQRGGRGG 359

Query: 1166 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYDQPGGYYPKNYYNTXXXXXXXXXXNAFN 1345
                                          H DQPG YY +N Y T          + +N
Sbjct: 360  GNGGRRGYSNGRGGRSGGRGGGGYQTDRNQHCDQPGNYYQRNNY-TNQGRGVRGGGHTYN 418

Query: 1346 NHGSAQGGHAPADEG 1390
            N+GS   G APAD G
Sbjct: 419  NNGST--GEAPADVG 431


>emb|CBI32031.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  301 bits (771), Expect = 4e-79
 Identities = 176/422 (41%), Positives = 232/422 (54%), Gaps = 9/422 (2%)
 Frame = +2

Query: 152  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 331
            ++  TDGPV+S +NKRLR L+KKYN+I Q+EEA +QGKPINK+QE+VL++KP++    D+
Sbjct: 3    ASDVTDGPVLSLINKRLRGLRKKYNRITQMEEAIAQGKPINKEQEDVLRSKPAVTDGADD 62

Query: 332  YEKLRQPLYTVVQEEVFLNNKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTST 511
             E+  +P    +  E  LN                        YF  LFDVK Q+DFTST
Sbjct: 63   GEE--KPESDHLNVENLLN----------------------LLYFGYLFDVKPQTDFTST 98

Query: 512  MLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSSLSHKNALRSCVE 691
            MLTRTHERGCCLTYDYVT             +IS L GL++SRPV+SSLSHKNAL+ C+E
Sbjct: 99   MLTRTHERGCCLTYDYVTDDATDLLGERDLDLISQLSGLLISRPVDSSLSHKNALQRCIE 158

Query: 692  HAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMKXXXXXXXXXGKYAPSN 871
            HA+LWL NSD+ I+    +TY GLRE+L KI+ASDYFTT+PEMK            A + 
Sbjct: 159  HARLWLANSDRPIEPDATVTYAGLREKLNKIMASDYFTTTPEMKAPVEVAAAAA--AGNY 216

Query: 872  VAXXXXXXXXXXXXXXXXDFAQYEQKDEETENFEGQEAGAEQSIPVEELSKDESEMANAV 1051
            V+                  AQY+QKDE+  N +G E G +QS PVEEL +DE E+ N  
Sbjct: 217  VSFQVPLHSSVVPVQVEGSIAQYQQKDEDNSNVQGHETGDDQSSPVEELHQDELEIENPA 276

Query: 1052 EIIS------DHKPEVDGEEQNMETKDHQYGQRRDYHN--XXXXXXXXXXXXXXXXXXXX 1207
            E++S        + EV+  + ++E+K+ QY  RR+Y N                      
Sbjct: 277  EVVSVQQEQAKQQAEVEWSQGDVESKE-QYVPRRNYQNTRGGRGGGGSGRRGGYPNGRGG 335

Query: 1208 XXXXXXXXXXXXXXXXHYDQPGGYYPKNYYNTXXXXXXXXXXNAFNNHG-SAQGGHAPAD 1384
                            +YDQPG YY + Y+N           N++NNH    QGGHAP +
Sbjct: 336  RSGGRVGGSYQNGRSQYYDQPGNYYSRGYHNNRGRGGRGAGGNSYNNHVLGIQGGHAPTE 395

Query: 1385 EG 1390
             G
Sbjct: 396  VG 397


>ref|XP_003613550.1| hypothetical protein MTR_5g037960 [Medicago truncatula]
            gi|355514885|gb|AES96508.1| hypothetical protein
            MTR_5g037960 [Medicago truncatula]
          Length = 433

 Score =  269 bits (688), Expect = 2e-69
 Identities = 167/437 (38%), Positives = 224/437 (51%), Gaps = 24/437 (5%)
 Frame = +2

Query: 152  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 331
            S+TTTDGPV++ +NKRLRAL+KK N+I  +EE+ SQGK +N +Q+EVL++K S+L LIDE
Sbjct: 4    SSTTTDGPVLNLINKRLRALRKKLNRITSMEESLSQGKSLNSEQQEVLRSKSSVLVLIDE 63

Query: 332  YEKLRQPLYTVVQEEVFL----------------NNKPXXXXXXXXXXXXXXXXXXXXXY 463
             EKLRQPL + + EE+ L                N++P                     Y
Sbjct: 64   LEKLRQPLSSALTEELELATQTKNDARETETQAENSEPRPSGENSDVVEDILNLL----Y 119

Query: 464  FSCLFDVKQQSDFTSTMLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRP 643
            F  LF+VK Q+DFTSTMLTRTHERGCCLTYDYVT              IS L GL++SRP
Sbjct: 120  FGSLFEVKTQNDFTSTMLTRTHERGCCLTYDYVTDDATDLLGEKDLDAISGLYGLLISRP 179

Query: 644  VNSSLSHKNALRSCVEHAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMK 823
             +SS SHKNALR C+EHAKLW+  + + ID   ++TY GLRE+L KI++S+YFTT+PEMK
Sbjct: 180  ADSSFSHKNALRRCIEHAKLWVSKAQQPIDPNVDVTYAGLREKLNKIMSSEYFTTTPEMK 239

Query: 824  XXXXXXXXXGKYAPSNVAXXXXXXXXXXXXXXXXDFAQYEQKDEETENFEGQEAGAEQSI 1003
                        A  N                        +K+E T N +GQ +G ++S 
Sbjct: 240  ----APVEVAAAAAGNYGSFQVPVHGSEVSVEVEGSDSQPEKNEGTANSQGQGSGDDRSD 295

Query: 1004 PVEELSKDESEMANAVEII------SDHKPEVDGEEQNMETKDHQYGQRR-DYHNXXXXX 1162
            P  E  KDE E  NA E +      ++ + +++  + + E K+ QY  RR  Y N     
Sbjct: 296  PEGEFQKDELEAENAAEAVPVQHEQTNPQGDLEYNQPDGEGKEQQYYPRRGGYQNQRGGR 355

Query: 1163 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYDQPGGYYPKNYYNTXXXXXXXXXXNAF 1342
                                           ++DQPG YYP+N YN             +
Sbjct: 356  GGGGRRGYSNGRGGRGGGGGRGRGYPNGGNQYHDQPGNYYPRNNYNN--RGRGGRGGGYY 413

Query: 1343 NNHGS-AQGGHAPADEG 1390
            +NHG+  Q  H   D G
Sbjct: 414  SNHGAGGQVNHVAGDVG 430


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