BLASTX nr result

ID: Coptis25_contig00002854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002854
         (1759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304636.1| predicted protein [Populus trichocarpa] gi|2...   654   0.0  
ref|XP_002297881.1| predicted protein [Populus trichocarpa] gi|2...   647   0.0  
ref|XP_002271514.1| PREDICTED: transaldolase isoform 1 [Vitis vi...   644   0.0  
gb|ABB17002.1| transaldolase-like protein [Solanum tuberosum]         643   0.0  
gb|AAB54016.1| transaldolase [Solanum tuberosum]                      640   0.0  

>ref|XP_002304636.1| predicted protein [Populus trichocarpa] gi|222842068|gb|EEE79615.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  654 bits (1686), Expect = 0.0
 Identities = 340/441 (77%), Positives = 371/441 (84%), Gaps = 5/441 (1%)
 Frame = +1

Query: 106  MSSISKLTNPIFAAKLNI-----SEPKPIITFQTRSLFHXXXXXXXXXXXITTNCVPRTS 270
            M++ISKL+NP  AA L+      S PK  + F T++                T   PRTS
Sbjct: 1    MATISKLSNPSPAASLSAPSRSSSLPKVFLGFSTKTSLSKVRLSLK-----NTQPSPRTS 55

Query: 271  LTVKCSKVDGNGIQEKKTSLHDLYELQGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAI 450
            L V+CS+  GNG   K+T+LHDLYE +GQSPWYDNLCRPVTDL+PLI SGVRGVTSNPAI
Sbjct: 56   LVVRCSQSSGNGSPIKRTTLHDLYEREGQSPWYDNLCRPVTDLIPLIESGVRGVTSNPAI 115

Query: 451  FQKAISTSNAYNDQFRELVQAGKDVQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVSV 630
            FQKAIS+SNAYNDQFRELVQ+GKD++ AYWELV+KDIQDACKLFE IYDQTDGGDGYVSV
Sbjct: 116  FQKAISSSNAYNDQFRELVQSGKDIETAYWELVVKDIQDACKLFESIYDQTDGGDGYVSV 175

Query: 631  EVSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIFS 810
            EVSPRLADDT+GTVEAAKWLHKVV+R NVYIKIPATA CIPSIKEVISLGISVNVTLIFS
Sbjct: 176  EVSPRLADDTQGTVEAAKWLHKVVDRPNVYIKIPATAPCIPSIKEVISLGISVNVTLIFS 235

Query: 811  LSRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGXX 990
            L+RYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTL+DKMLE IGTPEALDLRG  
Sbjct: 236  LTRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKA 295

Query: 991  XXXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPAYKDTLYVAPLIGPDT 1170
                           FSGPRWEALVKKGAKKQRLLWASTSVKNPAY DTLYVAPLIGPDT
Sbjct: 296  AVAQAALAYKLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDT 355

Query: 1171 VSTMPDQALQAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEGVDSFKK 1350
            VSTMPDQALQAF+DHG V+RTIDSNVSEAEGIY+ALEKLGIDW  VG+QLE+EGVDSFKK
Sbjct: 356  VSTMPDQALQAFVDHGIVARTIDSNVSEAEGIYNALEKLGIDWGYVGNQLEVEGVDSFKK 415

Query: 1351 SFESLLVTLAEKASSLNLVSL 1413
            SF+SLL TL EKA+SL LVSL
Sbjct: 416  SFDSLLDTLQEKANSLKLVSL 436


>ref|XP_002297881.1| predicted protein [Populus trichocarpa] gi|222845139|gb|EEE82686.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  647 bits (1669), Expect = 0.0
 Identities = 339/441 (76%), Positives = 370/441 (83%), Gaps = 6/441 (1%)
 Frame = +1

Query: 106  MSSISKLTNPIFAAKL-----NISEPKPIITFQTRSLFHXXXXXXXXXXXITTNCVP-RT 267
            M++ISKL+NP  AA L     + S P+  + F T++ F              TN  P RT
Sbjct: 1    MATISKLSNPSPAASLPAPSSSSSLPRVFLGFNTKTSFSKVASSSSGLSL--TNTQPWRT 58

Query: 268  SLTVKCSKVDGNGIQEKKTSLHDLYELQGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPA 447
            S  V+CS+  GN    K+T+LHDLYE +GQSPWYDNLCRPVTDL+PLI SGVRGVTSNPA
Sbjct: 59   SFVVRCSQSSGNVSPIKRTTLHDLYEREGQSPWYDNLCRPVTDLIPLIESGVRGVTSNPA 118

Query: 448  IFQKAISTSNAYNDQFRELVQAGKDVQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVS 627
            IFQKAIS+SNAYNDQFRELVQAGKD++ AYWELV+KDIQDACKLFE IYDQTDGGDGYVS
Sbjct: 119  IFQKAISSSNAYNDQFRELVQAGKDIETAYWELVVKDIQDACKLFEPIYDQTDGGDGYVS 178

Query: 628  VEVSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIF 807
            VEVSPRLADDT+GTVEAAKWLHKVV+R NVYIKIPATA CIPSIKEVISLGISVNVTLIF
Sbjct: 179  VEVSPRLADDTQGTVEAAKWLHKVVDRPNVYIKIPATAPCIPSIKEVISLGISVNVTLIF 238

Query: 808  SLSRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGX 987
            SL+RYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTL+DKMLE IGTPEALDLRG 
Sbjct: 239  SLTRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGK 298

Query: 988  XXXXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPAYKDTLYVAPLIGPD 1167
                            FSGPRWEALVKKGAKKQRLLWASTSVKNPAY DTLYVAPLIGPD
Sbjct: 299  AAVAQAGLAYKLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPD 358

Query: 1168 TVSTMPDQALQAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEGVDSFK 1347
            TVSTMPDQALQAF+DHG+V+RTIDSNVSEAEGIY+ALEKLGIDW  VG QLE+EGVDSFK
Sbjct: 359  TVSTMPDQALQAFVDHGSVARTIDSNVSEAEGIYNALEKLGIDWGYVGDQLEVEGVDSFK 418

Query: 1348 KSFESLLVTLAEKASSLNLVS 1410
            KSF+SLL TL EKA+SL LVS
Sbjct: 419  KSFDSLLDTLQEKANSLKLVS 439


>ref|XP_002271514.1| PREDICTED: transaldolase isoform 1 [Vitis vinifera]
            gi|296085535|emb|CBI29267.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  644 bits (1661), Expect = 0.0
 Identities = 334/444 (75%), Positives = 372/444 (83%), Gaps = 8/444 (1%)
 Frame = +1

Query: 106  MSSISKLTNPIFAAKLNIS--------EPKPIITFQTRSLFHXXXXXXXXXXXITTNCVP 261
            M+SISKL +P   +  ++S        +PK +I F +R +F+              N V 
Sbjct: 1    MASISKLVSPSPVSSYSVSGSLKSRSLQPKCLIDFHSRDVFNARVSSSRLS---VRNDVV 57

Query: 262  RTSLTVKCSKVDGNGIQEKKTSLHDLYELQGQSPWYDNLCRPVTDLLPLIASGVRGVTSN 441
            R SL V+CS+++GNG Q K+T+LHDLYE  GQSPWYDNLCRPVTDLLPLIASGVRGVTSN
Sbjct: 58   RGSLIVRCSQLEGNGSQIKRTTLHDLYEQGGQSPWYDNLCRPVTDLLPLIASGVRGVTSN 117

Query: 442  PAIFQKAISTSNAYNDQFRELVQAGKDVQDAYWELVIKDIQDACKLFEQIYDQTDGGDGY 621
            PAIFQKAIS+SNAYN+QFRELV AGKD++ AYWELV+KDIQDAC+LFE IYD+TDGGDGY
Sbjct: 118  PAIFQKAISSSNAYNEQFRELVLAGKDIESAYWELVVKDIQDACRLFEPIYDETDGGDGY 177

Query: 622  VSVEVSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTL 801
            VSVEVSP+LADDT GTVEAAKWL+KVV+R NVYIKIPATA C+PSIKEVISLGISVNVTL
Sbjct: 178  VSVEVSPKLADDTVGTVEAAKWLYKVVDRPNVYIKIPATAPCVPSIKEVISLGISVNVTL 237

Query: 802  IFSLSRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLR 981
            IFSL RYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTL+DK+LE IGTPEALDLR
Sbjct: 238  IFSLPRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKLLEKIGTPEALDLR 297

Query: 982  GXXXXXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPAYKDTLYVAPLIG 1161
            G                 FSGPRWEALVKKGAKKQRLLWASTSVKNPAY DTLYV+PLIG
Sbjct: 298  GKAAVAQAALAYQLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVSPLIG 357

Query: 1162 PDTVSTMPDQALQAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEGVDS 1341
            PDTVSTMPDQALQAF+DHG VSRTIDSNVSEAEGIYSALEKLGIDW  VGSQLE+EGV+S
Sbjct: 358  PDTVSTMPDQALQAFVDHGVVSRTIDSNVSEAEGIYSALEKLGIDWGYVGSQLELEGVES 417

Query: 1342 FKKSFESLLVTLAEKASSLNLVSL 1413
            FKKSF+SLL +L EKA+SL LVSL
Sbjct: 418  FKKSFDSLLDSLQEKANSLKLVSL 441


>gb|ABB17002.1| transaldolase-like protein [Solanum tuberosum]
          Length = 438

 Score =  643 bits (1658), Expect = 0.0
 Identities = 335/440 (76%), Positives = 366/440 (83%), Gaps = 4/440 (0%)
 Frame = +1

Query: 106  MSSISKLTNPIFAA----KLNISEPKPIITFQTRSLFHXXXXXXXXXXXITTNCVPRTSL 273
            M+SI KL+NP F +      + S PK ++  +T +  H           I  +   R SL
Sbjct: 1    MASICKLSNPCFNSTSYGSRSSSTPKFVVHLRTSTFNHRLSAGSKLSLVINPSI--RASL 58

Query: 274  TVKCSKVDGNGIQEKKTSLHDLYELQGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIF 453
             VKCS+ DGNG   K+T+LH LYE QGQSPWYDNLCRPVTDL+PLI SGVRGVTSNPAIF
Sbjct: 59   CVKCSQADGNGSSVKRTTLHHLYETQGQSPWYDNLCRPVTDLIPLIDSGVRGVTSNPAIF 118

Query: 454  QKAISTSNAYNDQFRELVQAGKDVQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVSVE 633
            QKAISTSNAYNDQFRELVQAGKD+   YWELV+KDIQDACKLFE IYD+TDGGDGYVSVE
Sbjct: 119  QKAISTSNAYNDQFRELVQAGKDIDSVYWELVVKDIQDACKLFETIYDKTDGGDGYVSVE 178

Query: 634  VSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIFSL 813
            VSPRLADDT+GTVEAAKWLHK V R NVYIKIPATA CIPSIKEVISLGISVNVTLIFSL
Sbjct: 179  VSPRLADDTEGTVEAAKWLHKKVERSNVYIKIPATAPCIPSIKEVISLGISVNVTLIFSL 238

Query: 814  SRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGXXX 993
            SRYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTLVDK+LE IGTPEALDLRG   
Sbjct: 239  SRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLVDKLLEKIGTPEALDLRGKXA 298

Query: 994  XXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPAYKDTLYVAPLIGPDTV 1173
                          FSGPRWEALVKKGAKKQRLLWASTSVKNPAY DTLYV PLIGPDTV
Sbjct: 299  NAQAALAYDLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVDPLIGPDTV 358

Query: 1174 STMPDQALQAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEGVDSFKKS 1353
            STMPDQALQAF+DHG+V+RTID+N+SEAEGIYSALEKLGIDW  VGSQLE+EGVDSFKKS
Sbjct: 359  STMPDQALQAFIDHGSVARTIDANLSEAEGIYSALEKLGIDWVFVGSQLELEGVDSFKKS 418

Query: 1354 FESLLVTLAEKASSLNLVSL 1413
            F+SLL +L EKA++L LV+L
Sbjct: 419  FDSLLDSLQEKANTLKLVNL 438


>gb|AAB54016.1| transaldolase [Solanum tuberosum]
          Length = 438

 Score =  640 bits (1651), Expect = 0.0
 Identities = 333/440 (75%), Positives = 364/440 (82%), Gaps = 4/440 (0%)
 Frame = +1

Query: 106  MSSISKLTNPIFAA----KLNISEPKPIITFQTRSLFHXXXXXXXXXXXITTNCVPRTSL 273
            M+SI KL+NP F +      + S PK ++  +T +  H           I  +   R SL
Sbjct: 1    MASICKLSNPCFNSTSYGSRSSSTPKFVVHLRTSTFNHRLSAGSKLSLVINPSI--RASL 58

Query: 274  TVKCSKVDGNGIQEKKTSLHDLYELQGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIF 453
             VKCS+ DGNG   K+T+LH LYE QGQSPWYDNLC PVTDL+PLI SGVRGVTSNPAIF
Sbjct: 59   CVKCSQADGNGSSVKRTTLHHLYETQGQSPWYDNLCLPVTDLIPLIDSGVRGVTSNPAIF 118

Query: 454  QKAISTSNAYNDQFRELVQAGKDVQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVSVE 633
            QKAISTSNAYNDQFRELVQAGKD+   YWELV+KDIQDACKLFE IYD+TDGGDGYVSVE
Sbjct: 119  QKAISTSNAYNDQFRELVQAGKDIDSVYWELVVKDIQDACKLFETIYDKTDGGDGYVSVE 178

Query: 634  VSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIFSL 813
            VSPRLADDT+GTVEAAKWLHK V R NVYIKIPATA CIPSIKEVISLGISVNVTLIFSL
Sbjct: 179  VSPRLADDTEGTVEAAKWLHKKVERSNVYIKIPATAPCIPSIKEVISLGISVNVTLIFSL 238

Query: 814  SRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGXXX 993
            SRYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTLVDK+LE IGTPEALDLRG   
Sbjct: 239  SRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLVDKLLEKIGTPEALDLRGKAA 298

Query: 994  XXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPAYKDTLYVAPLIGPDTV 1173
                          FSGPRWEALVKKGAKKQRLLWASTSVKNPAY DTLYV PLIGPDTV
Sbjct: 299  NAQAALAYDLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVDPLIGPDTV 358

Query: 1174 STMPDQALQAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEGVDSFKKS 1353
            STMPDQALQAF+DHG+V+RTID+N+SEAEGIYSALEKLGIDW  VGSQLE+EGVDSFKKS
Sbjct: 359  STMPDQALQAFIDHGSVARTIDANLSEAEGIYSALEKLGIDWVFVGSQLELEGVDSFKKS 418

Query: 1354 FESLLVTLAEKASSLNLVSL 1413
            F+SLL +L EKA++L LV+L
Sbjct: 419  FDSLLDSLQEKANTLKLVNL 438


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