BLASTX nr result

ID: Coptis25_contig00002843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002843
         (1757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa]        718   0.0  
emb|CAN81585.1| hypothetical protein VITISV_023191 [Vitis vinifera]   716   0.0  
gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa]        715   0.0  
ref|XP_002285653.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxi...   713   0.0  
ref|XP_002299284.1| predicted protein [Populus trichocarpa] gi|2...   712   0.0  

>gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa]
          Length = 464

 Score =  718 bits (1853), Expect = 0.0
 Identities = 356/430 (82%), Positives = 390/430 (90%)
 Frame = -2

Query: 1570 ICLAGDSAAYERSSSFGDDIVIVAAYRTALCKSKRGSFKDTYADDLLAPVLKAVVEKTNV 1391
            IC AGDSAAY RSS FGDD+VIVAAYRTALCKSKRG FKDTY DDLLAPVL+AVVEKTNV
Sbjct: 35   ICSAGDSAAYHRSSVFGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNV 94

Query: 1390 NPAEVGDIVVGTVLAPGSQRATECRMAAFYAGFPDTVPLRTVNRQCSSGLQXXXXXXXXX 1211
            NP EVGDIVVGTVLAPGSQRA+ECRMAAFYAGFP+TVP+RTVNRQCSSGLQ         
Sbjct: 95   NPNEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 154

Query: 1210 XAGFYDIGIGAGVESMSSNAMAFEGSVNPKAQDFQQAQNCLLPMGVTSENVAQRYGVTRQ 1031
             AGFYDIGIGAG+ESM+ N MA+EGSVNP+ +   QAQ+CLLPMG+TSENVA R+GVTRQ
Sbjct: 155  KAGFYDIGIGAGLESMTVNPMAWEGSVNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQ 214

Query: 1030 EQDQAAVDSHRKXXXXXXAGKFRDEIIPVATKIVDPKTGDEKPITVAVDDGIRPSTTVSD 851
            EQDQAAVDSHRK      +GKF+DEIIPV TKIVDPK+GDEKP+T++VDDGIRP+T+V+D
Sbjct: 215  EQDQAAVDSHRKAAAATASGKFKDEIIPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVAD 274

Query: 850  LGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMKRSLAMQKGLPILGVFRSFAAVGVDPAV 671
            LGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMKRS+AMQKGLPILGVFRSFAAVGVDPA+
Sbjct: 275  LGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAI 334

Query: 670  MGIGPAVAIPAAVKSAGLELDDIDLFEINEAFASQFVYCRKKLEIDPAKVNVNGGALAIG 491
            MG+GPAVAIPAAVKSAGLEL DIDLFE+NEAFASQFVYCRKKLE+DP K+NVNGGA+AIG
Sbjct: 335  MGVGPAVAIPAAVKSAGLELGDIDLFEVNEAFASQFVYCRKKLELDPEKINVNGGAMAIG 394

Query: 490  HPLGATGARCVATLLHEMKRRGKDCRFGIISMCIGTGMGAAAVLERGDCVDDLCNARKIE 311
            HPLG TGARCVATLLHEMKRRGKDCRFG++SMCIGTGMGAAAV ERGD  D+L NAR + 
Sbjct: 395  HPLGVTGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSCDELSNARTVG 454

Query: 310  INNFLSKDAR 281
             +NFLSKDAR
Sbjct: 455  THNFLSKDAR 464


>emb|CAN81585.1| hypothetical protein VITISV_023191 [Vitis vinifera]
          Length = 461

 Score =  716 bits (1847), Expect = 0.0
 Identities = 356/461 (77%), Positives = 404/461 (87%), Gaps = 1/461 (0%)
 Frame = -2

Query: 1660 MEKAFDRQKVXXXXXXXXXXXXXXXXXXXS-ICLAGDSAAYERSSSFGDDIVIVAAYRTA 1484
            MEKA +RQ+V                   + +C+AGDSAAY+R+S FGDD+VIVAAYRTA
Sbjct: 1    MEKAINRQRVLLQHLSPSSSAAEDESSLSASVCVAGDSAAYQRTSVFGDDVVIVAAYRTA 60

Query: 1483 LCKSKRGSFKDTYADDLLAPVLKAVVEKTNVNPAEVGDIVVGTVLAPGSQRATECRMAAF 1304
            LCKSKRG FKDTY DDLLAPVL+A++EKTN+NP EVGDIVVGTVLAPGSQRA+ECRMAAF
Sbjct: 61   LCKSKRGGFKDTYPDDLLAPVLRALIEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAAF 120

Query: 1303 YAGFPDTVPLRTVNRQCSSGLQXXXXXXXXXXAGFYDIGIGAGVESMSSNAMAFEGSVNP 1124
            YAGFP+TVP+RTVNRQCSSGLQ          AGFYDIGIGAG+ESM++N MA+EGS+NP
Sbjct: 121  YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSINP 180

Query: 1123 KAQDFQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVDSHRKXXXXXXAGKFRDEIIPV 944
            K ++F QAQ+CLLPMG+TSENVA R+GVTRQEQDQAAV+SH++       GKF+DEIIPV
Sbjct: 181  KVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIPV 240

Query: 943  ATKIVDPKTGDEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAV 764
            +TKIVDPKTGDEKP+T++VDDGIRP+  +SDL KLKPVFKK+G+TTAGNSSQVSDGAGAV
Sbjct: 241  STKIVDPKTGDEKPVTISVDDGIRPNAIMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 300

Query: 763  LLMKRSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 584
            LLMKRS+AM+KGLPILGVFR+FAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN
Sbjct: 301  LLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 360

Query: 583  EAFASQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGI 404
            EAFASQFVYCRKKL++DP K+NVNGGA+AIGHPLGATGARCV TLLHEMKRRGKDCRFG+
Sbjct: 361  EAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFGV 420

Query: 403  ISMCIGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDAR 281
            +SMCIGTGMGAAAV ERGDCVD+L NAR  E NN LSKDA+
Sbjct: 421  VSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKDAQ 461


>gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa]
          Length = 464

 Score =  715 bits (1846), Expect = 0.0
 Identities = 355/430 (82%), Positives = 388/430 (90%)
 Frame = -2

Query: 1570 ICLAGDSAAYERSSSFGDDIVIVAAYRTALCKSKRGSFKDTYADDLLAPVLKAVVEKTNV 1391
            IC AGDSAAY RSS FGDD+VIVAAYRTALCKSKRG FKDTY DDLLAPVL+AVVEKTNV
Sbjct: 35   ICSAGDSAAYHRSSVFGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNV 94

Query: 1390 NPAEVGDIVVGTVLAPGSQRATECRMAAFYAGFPDTVPLRTVNRQCSSGLQXXXXXXXXX 1211
            NP EVGDIVVGTVLAPGSQRA+ECRMAAFYAGFP+TVP+RTVNRQCSSGLQ         
Sbjct: 95   NPNEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 154

Query: 1210 XAGFYDIGIGAGVESMSSNAMAFEGSVNPKAQDFQQAQNCLLPMGVTSENVAQRYGVTRQ 1031
             AGFYDIGIGAG+ESM+ N MA+EGSVNP+ +   QAQ+CLLPMG+TSENVA R+GVTRQ
Sbjct: 155  KAGFYDIGIGAGLESMTVNPMAWEGSVNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQ 214

Query: 1030 EQDQAAVDSHRKXXXXXXAGKFRDEIIPVATKIVDPKTGDEKPITVAVDDGIRPSTTVSD 851
            EQDQAAVDSHRK      +GKF+DEIIPV TKIVDPK+GDEKP+T++VDDGIRP+T+V+D
Sbjct: 215  EQDQAAVDSHRKAAAATASGKFKDEIIPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVAD 274

Query: 850  LGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMKRSLAMQKGLPILGVFRSFAAVGVDPAV 671
            LGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMKRS+AMQKGLPILGVFRSFAAVGVDPA+
Sbjct: 275  LGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAI 334

Query: 670  MGIGPAVAIPAAVKSAGLELDDIDLFEINEAFASQFVYCRKKLEIDPAKVNVNGGALAIG 491
            MG+GPAVAIPAAVKSAGLEL DIDLFEINEAFASQFVYCRKKLE+DP K+NVNGGA+AIG
Sbjct: 335  MGVGPAVAIPAAVKSAGLELGDIDLFEINEAFASQFVYCRKKLELDPEKINVNGGAMAIG 394

Query: 490  HPLGATGARCVATLLHEMKRRGKDCRFGIISMCIGTGMGAAAVLERGDCVDDLCNARKIE 311
            HPLG TGARCV TLLHEMKRRGKDCRFG++SMCIGTGMGAAAV ERGD  D+L N R + 
Sbjct: 395  HPLGVTGARCVVTLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSCDELSNTRTVG 454

Query: 310  INNFLSKDAR 281
             +NFLSKDAR
Sbjct: 455  THNFLSKDAR 464


>ref|XP_002285653.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal isoform 1 [Vitis
            vinifera] gi|297741919|emb|CBI33354.3| unnamed protein
            product [Vitis vinifera]
          Length = 461

 Score =  713 bits (1841), Expect = 0.0
 Identities = 356/461 (77%), Positives = 404/461 (87%), Gaps = 1/461 (0%)
 Frame = -2

Query: 1660 MEKAFDRQKVXXXXXXXXXXXXXXXXXXXS-ICLAGDSAAYERSSSFGDDIVIVAAYRTA 1484
            MEKA +RQ+V                   + +C+AGDSAAY+R+S FGDD+VIVAAYRTA
Sbjct: 1    MEKAINRQRVLLQHLSPSSSAAEDESSLSASVCVAGDSAAYQRTSVFGDDVVIVAAYRTA 60

Query: 1483 LCKSKRGSFKDTYADDLLAPVLKAVVEKTNVNPAEVGDIVVGTVLAPGSQRATECRMAAF 1304
            LCKSKRG FKDTY DDLLAPVL+A++EKTN+NP EVGDIVVGTVLAPGSQRA+ECRMAAF
Sbjct: 61   LCKSKRGGFKDTYPDDLLAPVLRALLEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAAF 120

Query: 1303 YAGFPDTVPLRTVNRQCSSGLQXXXXXXXXXXAGFYDIGIGAGVESMSSNAMAFEGSVNP 1124
            YAGFP+TVP+RTVNRQCSSGLQ          AGFYDIGIGAG+ESM++N MA+EGS+NP
Sbjct: 121  YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSINP 180

Query: 1123 KAQDFQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVDSHRKXXXXXXAGKFRDEIIPV 944
            K ++F QAQ+CLLPMG+TSENVA R+GVTRQEQDQAAV+SH++       GKF+DEIIPV
Sbjct: 181  KVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIPV 240

Query: 943  ATKIVDPKTGDEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAV 764
            +TKIVDPKTGDEK +T++VDDGIRP+ T+SDL KLKPVFKK+G+TTAGNSSQVSDGAGAV
Sbjct: 241  STKIVDPKTGDEKLVTISVDDGIRPNATMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 300

Query: 763  LLMKRSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 584
            LLMKRS+AM+KGLPILGVFR+FAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN
Sbjct: 301  LLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 360

Query: 583  EAFASQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGI 404
            EAFASQFVYCRKKL++DP K+NVNGGA+AIGHPLGATGARCV TLLHEMKRRGKDCRFG+
Sbjct: 361  EAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFGV 420

Query: 403  ISMCIGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDAR 281
            +SMCIGTGMGAAAV ERGDCVD+L NAR  E NN LSKDA+
Sbjct: 421  VSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKDAQ 461


>ref|XP_002299284.1| predicted protein [Populus trichocarpa] gi|222846542|gb|EEE84089.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  712 bits (1838), Expect = 0.0
 Identities = 352/460 (76%), Positives = 404/460 (87%)
 Frame = -2

Query: 1660 MEKAFDRQKVXXXXXXXXXXXXXXXXXXXSICLAGDSAAYERSSSFGDDIVIVAAYRTAL 1481
            MEKA +RQ+V                   S CLAGDSAAY+R+S++GDD+VIVAAYRT  
Sbjct: 1    MEKAINRQRVLLEHLRPSSSHNFESTLSASACLAGDSAAYQRTSAYGDDVVIVAAYRTPQ 60

Query: 1480 CKSKRGSFKDTYADDLLAPVLKAVVEKTNVNPAEVGDIVVGTVLAPGSQRATECRMAAFY 1301
            CKSKRG FKDT+ADDLLAPVLKA++EKTN++P EVGDIVVG+VLAPGSQRA+ECRMAAFY
Sbjct: 61   CKSKRGGFKDTHADDLLAPVLKALIEKTNLDPREVGDIVVGSVLAPGSQRASECRMAAFY 120

Query: 1300 AGFPDTVPLRTVNRQCSSGLQXXXXXXXXXXAGFYDIGIGAGVESMSSNAMAFEGSVNPK 1121
            AGFP+TVP+RTVNRQCSSGLQ          AGFY+IGIGAG+ESM+ N M+++G VNPK
Sbjct: 121  AGFPETVPIRTVNRQCSSGLQAVADVAASIKAGFYEIGIGAGLESMTINQMSWDGDVNPK 180

Query: 1120 AQDFQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVDSHRKXXXXXXAGKFRDEIIPVA 941
             ++FQ+AQ+CLLPMG+TSENVA R+GVTRQEQDQAAVDSHRK      +G+F+DEIIPVA
Sbjct: 181  LKNFQKAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGRFKDEIIPVA 240

Query: 940  TKIVDPKTGDEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAVL 761
            TKIVDPKTGDEKPI V+VDDGIRP T+V+ LGKLK VFKKDG+TTAGNSSQ+SDGAGAVL
Sbjct: 241  TKIVDPKTGDEKPIVVSVDDGIRPETSVAGLGKLKTVFKKDGTTTAGNSSQISDGAGAVL 300

Query: 760  LMKRSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEINE 581
            LMKRS+A+QKGLPILGVFR+FAAVGVDPA+MG+GPAVAIPAAVK+AGLEL+DIDLFEINE
Sbjct: 301  LMKRSVAVQKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKAAGLELEDIDLFEINE 360

Query: 580  AFASQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGII 401
            AFASQFVYCRKKLE+DP K+NVNGGA+AIGHPLGATGARCVATLLHEMKRRG+DCRFG++
Sbjct: 361  AFASQFVYCRKKLELDPQKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGRDCRFGVV 420

Query: 400  SMCIGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDAR 281
            SMCIGTGMGAAAV ERGD  D+LCNARK+E NN LSKD+R
Sbjct: 421  SMCIGTGMGAAAVFERGDGCDELCNARKVESNNLLSKDSR 460


Top