BLASTX nr result

ID: Coptis25_contig00002839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002839
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...   380   e-103
emb|CBI25718.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2...   367   2e-99
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   366   3e-99
ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like...   360   1e-97

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score =  380 bits (975), Expect = e-103
 Identities = 181/252 (71%), Positives = 210/252 (83%)
 Frame = -3

Query: 756  YQPPFQSCIQDAKASCLMCSYNAVNGVPSCAKKDLLDQARNEWGLTGYIVSDCDAVATVY 577
            YQPPF+SC+Q  KASCLMCSYN VNGVP+CA++DL  +A+ EWG  GYI SDCDAVATVY
Sbjct: 258  YQPPFRSCVQQGKASCLMCSYNRVNGVPACARQDLFQKAKTEWGFKGYITSDCDAVATVY 317

Query: 576  EYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLR 397
            EYQHYA SPEDAVADVLKAGTDINCG+YML +T+SA++QGKV+EEDIDRALFNLFSVQ+R
Sbjct: 318  EYQHYANSPEDAVADVLKAGTDINCGSYMLRHTQSAIDQGKVKEEDIDRALFNLFSVQMR 377

Query: 396  LGLFDGNPTKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKEFLPLQKKRISSLAI 217
            LGLFDG+P  G +GNLGPKD+CT+EHR LA EAA+QGIVLLKNDK+FLPL K RISSLAI
Sbjct: 378  LGLFDGDPANGLYGNLGPKDVCTKEHRTLALEAARQGIVLLKNDKKFLPLDKSRISSLAI 437

Query: 216  IGPTANNTSNLGGTYTGIPCNPKSFFEGFQVHTKNVYYASGCTDVACQSTDGFAEAVSTA 37
            IGP A+    LGG YTGIPC P+S  EG + + +   +A+GC DV C S  GF EAVS A
Sbjct: 438  IGPQADQPF-LGGGYTGIPCKPESLVEGLKTYVEKTSFAAGCVDVPCLSDTGFDEAVSIA 496

Query: 36   QMADVTVVVAGL 1
            + AD+ VVVAGL
Sbjct: 497  RKADIVVVVAGL 508


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  380 bits (975), Expect = e-103
 Identities = 181/252 (71%), Positives = 210/252 (83%)
 Frame = -3

Query: 756 YQPPFQSCIQDAKASCLMCSYNAVNGVPSCAKKDLLDQARNEWGLTGYIVSDCDAVATVY 577
           YQPPF+SC+Q  KASCLMCSYN VNGVP+CA++DL  +A+ EWG  GYI SDCDAVATVY
Sbjct: 237 YQPPFRSCVQQGKASCLMCSYNRVNGVPACARQDLFQKAKTEWGFKGYITSDCDAVATVY 296

Query: 576 EYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLR 397
           EYQHYA SPEDAVADVLKAGTDINCG+YML +T+SA++QGKV+EEDIDRALFNLFSVQ+R
Sbjct: 297 EYQHYANSPEDAVADVLKAGTDINCGSYMLRHTQSAIDQGKVKEEDIDRALFNLFSVQMR 356

Query: 396 LGLFDGNPTKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKEFLPLQKKRISSLAI 217
           LGLFDG+P  G +GNLGPKD+CT+EHR LA EAA+QGIVLLKNDK+FLPL K RISSLAI
Sbjct: 357 LGLFDGDPANGLYGNLGPKDVCTKEHRTLALEAARQGIVLLKNDKKFLPLDKSRISSLAI 416

Query: 216 IGPTANNTSNLGGTYTGIPCNPKSFFEGFQVHTKNVYYASGCTDVACQSTDGFAEAVSTA 37
           IGP A+    LGG YTGIPC P+S  EG + + +   +A+GC DV C S  GF EAVS A
Sbjct: 417 IGPQADQPF-LGGGYTGIPCKPESLVEGLKTYVEKTSFAAGCVDVPCLSDTGFDEAVSIA 475

Query: 36  QMADVTVVVAGL 1
           + AD+ VVVAGL
Sbjct: 476 RKADIVVVVAGL 487


>ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1|
            predicted protein [Populus trichocarpa]
          Length = 780

 Score =  367 bits (941), Expect = 2e-99
 Identities = 173/252 (68%), Positives = 206/252 (81%)
 Frame = -3

Query: 756  YQPPFQSCIQDAKASCLMCSYNAVNGVPSCAKKDLLDQARNEWGLTGYIVSDCDAVATVY 577
            YQPPF+SCIQ  KASCLMCSYN VNGVP+CA++DLL + R EWG  GYI SDCDAVAT++
Sbjct: 247  YQPPFRSCIQKGKASCLMCSYNEVNGVPACAREDLLQKPRTEWGFKGYITSDCDAVATIF 306

Query: 576  EYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLR 397
            EYQ+Y+KSPEDAVA  LKAG DINCGTY+L N +SAVE+GK+QEEDIDRAL NLFSVQLR
Sbjct: 307  EYQNYSKSPEDAVAIALKAGMDINCGTYVLRNAQSAVEKGKLQEEDIDRALHNLFSVQLR 366

Query: 396  LGLFDGNPTKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKEFLPLQKKRISSLAI 217
            LGLFDG+P KG+FG LGPK++CT+EH+ LA EAA+QGIVLLKNDK+ LPL KK +SSLAI
Sbjct: 367  LGLFDGDPRKGQFGKLGPKNVCTKEHKTLALEAARQGIVLLKNDKKLLPLNKKAVSSLAI 426

Query: 216  IGPTANNTSNLGGTYTGIPCNPKSFFEGFQVHTKNVYYASGCTDVACQSTDGFAEAVSTA 37
            IGP AN  ++LGG YTG PC+P+S FEG + + K   YA GC DVAC S   F +A+  A
Sbjct: 427  IGPLANMANSLGGDYTGYPCDPQSLFEGLKAYVKKTSYAIGCLDVACVSDTQFHKAIIVA 486

Query: 36   QMADVTVVVAGL 1
            + AD  ++VAGL
Sbjct: 487  KRADFVIIVAGL 498


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
            Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  366 bits (939), Expect = 3e-99
 Identities = 175/252 (69%), Positives = 205/252 (81%)
 Frame = -3

Query: 756  YQPPFQSCIQDAKASCLMCSYNAVNGVPSCAKKDLLDQARNEWGLTGYIVSDCDAVATVY 577
            YQPPF+ C+Q  KASCLMCSYN VNGVP+CA KDLL   RN+WG  GYI SDCDAVATV+
Sbjct: 248  YQPPFRGCVQQGKASCLMCSYNEVNGVPACASKDLLGLVRNKWGFEGYIASDCDAVATVF 307

Query: 576  EYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLR 397
            EYQ YAKS EDAVADVLKAG DINCGT+ML +T SA+EQG V+EED+DRALFNLFSVQ+R
Sbjct: 308  EYQKYAKSAEDAVADVLKAGMDINCGTFMLRHTESAIEQGLVKEEDLDRALFNLFSVQMR 367

Query: 396  LGLFDGNPTKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKEFLPLQKKRISSLAI 217
            LGLF+G+P KGKFG LGP+D+CT EH+KLA EAA+QGIVLLKND +FLPL KK   SLAI
Sbjct: 368  LGLFNGDPEKGKFGKLGPQDVCTPEHKKLALEAARQGIVLLKNDNKFLPLDKKDRVSLAI 427

Query: 216  IGPTANNTSNLGGTYTGIPCNPKSFFEGFQVHTKNVYYASGCTDVACQSTDGFAEAVSTA 37
            IGP A  TS LGG Y+GIPC+P+S ++G + + K + YA GC+DV C S DGFA A+  A
Sbjct: 428  IGPMA-TTSELGGGYSGIPCSPRSLYDGLKEYVKTISYAFGCSDVKCDSDDGFAVAIDIA 486

Query: 36   QMADVTVVVAGL 1
            + AD  V+VAGL
Sbjct: 487  KQADFVVIVAGL 498


>ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like [Glycine max]
          Length = 780

 Score =  360 bits (925), Expect = 1e-97
 Identities = 173/252 (68%), Positives = 205/252 (81%)
 Frame = -3

Query: 756 YQPPFQSCIQDAKASCLMCSYNAVNGVPSCAKKDLLDQARNEWGLTGYIVSDCDAVATVY 577
           YQPPF+SCIQ  KASCLMCSYN VNGVP+CA ++LL  AR++WG  GYI SDCDAVATVY
Sbjct: 245 YQPPFRSCIQQGKASCLMCSYNEVNGVPACASEELLGLARDKWGFKGYITSDCDAVATVY 304

Query: 576 EYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLR 397
           EYQ YAKS EDAVADVLKAG DINCGT+ML +T SA+EQGKV+EED+DRAL NLFSVQLR
Sbjct: 305 EYQKYAKSQEDAVADVLKAGMDINCGTFMLRHTESAIEQGKVKEEDLDRALLNLFSVQLR 364

Query: 396 LGLFDGNPTKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKEFLPLQKKRISSLAI 217
           LGLFDG+P +G+FG LGPKD+CT+EH+ LA +AA+QGIVLLKNDK+FLPL +   +SLA+
Sbjct: 365 LGLFDGDPIRGRFGKLGPKDVCTQEHKTLALDAARQGIVLLKNDKKFLPLDRDIGASLAV 424

Query: 216 IGPTANNTSNLGGTYTGIPCNPKSFFEGFQVHTKNVYYASGCTDVACQSTDGFAEAVSTA 37
           IGP A  T+ LGG Y+GIPC+  S +EG     + + YA GC DV C S DGFAEA+ TA
Sbjct: 425 IGPLA-TTTKLGGGYSGIPCSSSSLYEGLGEFAERISYAFGCYDVPCDSDDGFAEAIDTA 483

Query: 36  QMADVTVVVAGL 1
           + AD  V+VAGL
Sbjct: 484 KQADFVVIVAGL 495


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