BLASTX nr result

ID: Coptis25_contig00002815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002815
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235713.1| uncharacterized protein LOC100305973 [Glycin...    79   3e-13
ref|XP_002275502.1| PREDICTED: transmembrane protein 205 [Vitis ...    77   1e-12
ref|XP_003591427.1| Transmembrane protein [Medicago truncatula] ...    77   2e-12
ref|XP_002302753.1| predicted protein [Populus trichocarpa] gi|1...    76   2e-12
gb|AFK37222.1| unknown [Lotus japonicus]                               76   3e-12

>ref|NP_001235713.1| uncharacterized protein LOC100305973 [Glycine max]
           gi|255627153|gb|ACU13921.1| unknown [Glycine max]
          Length = 208

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -3

Query: 358 AAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 245
           AAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL
Sbjct: 171 AAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 208


>ref|XP_002275502.1| PREDICTED: transmembrane protein 205 [Vitis vinifera]
           gi|147788962|emb|CAN73725.1| hypothetical protein
           VITISV_016653 [Vitis vinifera]
           gi|297743961|emb|CBI36931.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/38 (94%), Positives = 38/38 (100%)
 Frame = -3

Query: 358 AAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 245
           AAMNKKFGMIHGLSSLANIMSFGSLA+HSWYLAGK+DL
Sbjct: 176 AAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAGKMDL 213


>ref|XP_003591427.1| Transmembrane protein [Medicago truncatula]
           gi|355480475|gb|AES61678.1| Transmembrane protein
           [Medicago truncatula]
          Length = 208

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -3

Query: 358 AAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 245
           A MNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGK+DL
Sbjct: 171 AKMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKLDL 208


>ref|XP_002302753.1| predicted protein [Populus trichocarpa] gi|118484919|gb|ABK94325.1|
           unknown [Populus trichocarpa]
           gi|222844479|gb|EEE82026.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/38 (94%), Positives = 38/38 (100%)
 Frame = -3

Query: 358 AAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 245
           AAMNKKFGMIHGLSSLANIMSFGSLA+HSWYLAGKI+L
Sbjct: 172 AAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAGKINL 209


>gb|AFK37222.1| unknown [Lotus japonicus]
          Length = 208

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/38 (92%), Positives = 38/38 (100%)
 Frame = -3

Query: 358 AAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 245
           AAMNKKFGMIHGLSSL+NIMSFGSLA+HSWYLAGKI+L
Sbjct: 171 AAMNKKFGMIHGLSSLSNIMSFGSLAVHSWYLAGKINL 208


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