BLASTX nr result

ID: Coptis25_contig00002811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002811
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28882.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002276594.1| PREDICTED: centromere/kinetochore protein zw...   105   3e-21
ref|XP_003519440.1| PREDICTED: centromere/kinetochore protein zw...   104   6e-21
ref|XP_003545204.1| PREDICTED: centromere/kinetochore protein zw...   101   7e-20
ref|XP_002879422.1| ATZW10 [Arabidopsis lyrata subsp. lyrata] gi...   101   7e-20

>emb|CBI28882.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/122 (46%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   LVVGLVERLKGVRESLRVGKFVDAAEGVRDLRIGLCISGEGNEVVNSEPKVFGLLRKEWM 182
           ++V L ERLK V+E L+ G+ + AAE VRDL+  +     G      EP V+GLLRKEW 
Sbjct: 70  VIVELSERLKSVQEDLKNGRLISAAEAVRDLKKAV-----GTVAEEREPVVYGLLRKEWA 124

Query: 183 DCFEQVEDVFANVMSNAVRF--EGGEVRVKCRXXXXXXXXXXXRTVLTAMEVIGVLDYGL 356
           +CFE+++ +    M NAVRF  E  +VRVK R           RT+L AM+V+G+LDYGL
Sbjct: 125 ECFEEIQGMLVKFMENAVRFEREPNKVRVKLRLSVDGTHEIELRTILEAMDVVGILDYGL 184

Query: 357 AK 362
           AK
Sbjct: 185 AK 186


>ref|XP_002276594.1| PREDICTED: centromere/kinetochore protein zw10 homolog [Vitis
           vinifera]
          Length = 744

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/122 (46%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   LVVGLVERLKGVRESLRVGKFVDAAEGVRDLRIGLCISGEGNEVVNSEPKVFGLLRKEWM 182
           ++V L ERLK V+E L+ G+ + AAE VRDL+  +     G      EP V+GLLRKEW 
Sbjct: 122 VIVELSERLKSVQEDLKNGRLISAAEAVRDLKKAV-----GTVAEEREPVVYGLLRKEWA 176

Query: 183 DCFEQVEDVFANVMSNAVRF--EGGEVRVKCRXXXXXXXXXXXRTVLTAMEVIGVLDYGL 356
           +CFE+++ +    M NAVRF  E  +VRVK R           RT+L AM+V+G+LDYGL
Sbjct: 177 ECFEEIQGMLVKFMENAVRFEREPNKVRVKLRLSVDGTHEIELRTILEAMDVVGILDYGL 236

Query: 357 AK 362
           AK
Sbjct: 237 AK 238


>ref|XP_003519440.1| PREDICTED: centromere/kinetochore protein zw10 homolog [Glycine
           max]
          Length = 742

 Score =  104 bits (260), Expect = 6e-21
 Identities = 55/121 (45%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
 Frame = +3

Query: 6   VVGLVERLKGVRESLRVGKFVDAAEGVRDLRIGLCISGEGNEVVNSEPKVFGLLRKEWMD 185
           VV L +RL+ VRE+L+ G+F  AA+G+++L++ L I  E +     EP V+GLLRKEW  
Sbjct: 124 VVALNQRLESVREALKSGRFEFAAQGLKELKVALRIGDEDDR----EPLVYGLLRKEWSQ 179

Query: 186 CFEQVEDVFANVMSNAVRFEG--GEVRVKCRXXXXXXXXXXXRTVLTAMEVIGVLDYGLA 359
           CFE++++V  N M  AVRF+G   +V +K             +TVL AM+VIG+L+YGLA
Sbjct: 180 CFEEIQEVLVNFMEKAVRFDGDLNQVEIKYHLEVENVNGIQLQTVLEAMDVIGILEYGLA 239

Query: 360 K 362
           K
Sbjct: 240 K 240


>ref|XP_003545204.1| PREDICTED: centromere/kinetochore protein zw10 homolog [Glycine
           max]
          Length = 742

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/121 (46%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
 Frame = +3

Query: 6   VVGLVERLKGVRESLRVGKFVDAAEGVRDLRIGLCISGEGNEVVNSEPKVFGLLRKEWMD 185
           VV L +RL+ VRE+L+ G+F  AA+G+++L++ L I GE N+    EP V+GLLRKEW  
Sbjct: 124 VVALNQRLESVREALKSGRFEFAAQGLKELKVALRI-GEEND---REPLVYGLLRKEWSQ 179

Query: 186 CFEQVEDVFANVMSNAVRFEG--GEVRVKCRXXXXXXXXXXXRTVLTAMEVIGVLDYGLA 359
           CFE++++V    M  AVRF+G   +V VK              TV+ AM+VIG+L+YGLA
Sbjct: 180 CFEEIQEVLMKFMEKAVRFDGDLNQVEVKYHLEVENVNGIQLHTVVEAMDVIGILEYGLA 239

Query: 360 K 362
           K
Sbjct: 240 K 240


>ref|XP_002879422.1| ATZW10 [Arabidopsis lyrata subsp. lyrata]
           gi|297325261|gb|EFH55681.1| ATZW10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/121 (46%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
 Frame = +3

Query: 6   VVGLVERLKGVRESLRVGKFVDAAEGVRDLRIGLCISGEGNEVVNSEPKVFGLLRKEWMD 185
           +VG+ E L+  +E+L+ G+F  AAE +R+L++ L I GE  E    EP  + LLRKEW +
Sbjct: 127 IVGICEALQETKEALKNGRFRFAAERIRELKVVLRI-GEEEE---GEPVAYALLRKEWSN 182

Query: 186 CFEQVEDVFANVMSNAVRFE--GGEVRVKCRXXXXXXXXXXXRTVLTAMEVIGVLDYGLA 359
           CF+++++V A  M NAVRFE     +R+KC+            TVL AMEVIG+LDYGLA
Sbjct: 183 CFDEIQEVLAKFMENAVRFELDSSRLRIKCQLSVGETAGIALSTVLEAMEVIGMLDYGLA 242

Query: 360 K 362
           K
Sbjct: 243 K 243


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