BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002797
         (1602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis...   397   e-108
ref|XP_002526504.1| protein with unknown function [Ricinus commu...   395   e-107
ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|2...   391   e-106
ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group] g...   390   e-106
tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, parti...   390   e-106

>ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
          Length = 208

 Score =  397 bits (1020), Expect = e-108
 Identities = 204/208 (98%), Positives = 205/208 (98%)
 Frame = +3

Query: 486  MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 665
            MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1    MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 666  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 845
            QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNT+KWIEEVRTERGSDVIIVLV
Sbjct: 61   QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVIIVLV 120

Query: 846  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 1025
            GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 1026 QEDMVDVNLKSSNANTSQSQPQGGGCSC 1109
            QEDMVDVNLKSSN N SQSQPQ GGCSC
Sbjct: 181  QEDMVDVNLKSSNTNASQSQPQAGGCSC 208


>ref|XP_002526504.1| protein with unknown function [Ricinus communis]
            gi|223534179|gb|EEF35895.1| protein with unknown function
            [Ricinus communis]
          Length = 208

 Score =  395 bits (1016), Expect = e-107
 Identities = 203/208 (97%), Positives = 204/208 (98%)
 Frame = +3

Query: 486  MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 665
            MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1    MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 666  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 845
            QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61   QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 846  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 1025
            GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 1026 QEDMVDVNLKSSNANTSQSQPQGGGCSC 1109
            QEDMVDVNLKSSN N SQSQPQ GGC+C
Sbjct: 181  QEDMVDVNLKSSNTNASQSQPQSGGCAC 208


>ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|222844210|gb|EEE81757.1|
            predicted protein [Populus trichocarpa]
          Length = 208

 Score =  391 bits (1005), Expect = e-106
 Identities = 201/208 (96%), Positives = 205/208 (98%)
 Frame = +3

Query: 486  MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 665
            MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1    MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 666  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 845
            QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVR+ERGSDVIIVLV
Sbjct: 61   QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLV 120

Query: 846  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 1025
            GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS+K
Sbjct: 121  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSK 180

Query: 1026 QEDMVDVNLKSSNANTSQSQPQGGGCSC 1109
            QEDMVDVNLKSSNAN SQSQ Q GGC+C
Sbjct: 181  QEDMVDVNLKSSNANASQSQQQSGGCAC 208


>ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
            gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6
            [Oryza sativa Japonica Group]
            gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa
            Japonica Group]
          Length = 208

 Score =  390 bits (1003), Expect = e-106
 Identities = 201/208 (96%), Positives = 204/208 (98%)
 Frame = +3

Query: 486  MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 665
            MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1    MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 666  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 845
            QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61   QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 846  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 1025
            GNKTDLVDKRQVSIEEGE KA+DL VMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121  GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 1026 QEDMVDVNLKSSNANTSQSQPQGGGCSC 1109
            QEDMVDVNLKSSNAN+SQSQ Q GGCSC
Sbjct: 181  QEDMVDVNLKSSNANSSQSQAQAGGCSC 208


>tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, partial [Zea mays]
          Length = 249

 Score =  390 bits (1002), Expect = e-106
 Identities = 207/244 (84%), Positives = 214/244 (87%), Gaps = 9/244 (3%)
 Frame = +3

Query: 486  MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 665
            MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1    MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 666  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 845
            QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61   QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120

Query: 846  GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 1025
            GNKTDLVDKRQVSIEEGE KA+DL VMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121  GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 1026 QEDMVDVNLKSSNANTSQSQPQGGGCSC*CEMLSQDSHVS---------TTFCSFGFATS 1178
            QEDMVDVNL+S NAN+SQSQ Q GGCSC    LS  + VS           FC      +
Sbjct: 181  QEDMVDVNLRSGNANSSQSQAQAGGCSCYSPSLSYSTIVSLLLYPIYHYRVFCRVTVFRT 240

Query: 1179 FLSC 1190
             LSC
Sbjct: 241  VLSC 244