BLASTX nr result

ID: Coptis25_contig00002795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002795
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22977.3| unnamed protein product [Vitis vinifera]              114   9e-35
ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like ...   114   1e-34
emb|CBI36879.3| unnamed protein product [Vitis vinifera]              117   7e-34
ref|NP_001236701.1| uncharacterized protein LOC100306301 [Glycin...   109   6e-33
ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259...   114   1e-32

>emb|CBI22977.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  114 bits (285), Expect(2) = 9e-35
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = -1

Query: 304 SQGIDLIAGGKSKKAKRTGPKSDDIYLKLLVKMYRFLVRRTESRFNAVVLKRLFMSKINK 125
           + GIDL+AGGKSKK KRT PKSDDIYLKLLVK+YRFLVRRT S+FNAV+LKRLFMSKINK
Sbjct: 67  AMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINK 126

Query: 124 PPMS 113
           PPMS
Sbjct: 127 PPMS 130



 Score = 57.8 bits (138), Expect(2) = 9e-35
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -2

Query: 108 MSLSRLIRYMKGKEDRIAVLVGAVTDDTHVYEV 10
           MSLSRLIRYM+GKED+IAVLVG VTDD  VYEV
Sbjct: 129 MSLSRLIRYMQGKEDKIAVLVGTVTDDLRVYEV 161


>ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
          Length = 187

 Score =  114 bits (284), Expect(2) = 1e-34
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -1

Query: 298 GIDLIAGGKSKKAKRTGPKSDDIYLKLLVKMYRFLVRRTESRFNAVVLKRLFMSKINKPP 119
           GIDL+AGGKSKK KRT PKSDDIYLKLLVK+YRFLVRRT S+FNAV+LKRLFMSKINKPP
Sbjct: 2   GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKPP 61

Query: 118 MS 113
           MS
Sbjct: 62  MS 63



 Score = 57.8 bits (138), Expect(2) = 1e-34
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -2

Query: 108 MSLSRLIRYMKGKEDRIAVLVGAVTDDTHVYEV 10
           MSLSRLIRYM+GKED+IAVLVG VTDD  VYEV
Sbjct: 62  MSLSRLIRYMQGKEDKIAVLVGTVTDDLRVYEV 94


>emb|CBI36879.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  117 bits (293), Expect(2) = 7e-34
 Identities = 57/74 (77%), Positives = 67/74 (90%)
 Frame = -1

Query: 334 PLFYSSFSIVSQGIDLIAGGKSKKAKRTGPKSDDIYLKLLVKMYRFLVRRTESRFNAVVL 155
           PLF++S   V+ GIDL+AGGKSK+ KRT PKSDDIYLKLLVK+YRFLVRRT S+FNAV+L
Sbjct: 102 PLFFTS--TVAMGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVIL 159

Query: 154 KRLFMSKINKPPMS 113
           KRLFMSK+NKPP+S
Sbjct: 160 KRLFMSKVNKPPLS 173



 Score = 51.6 bits (122), Expect(2) = 7e-34
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -2

Query: 108 MSLSRLIRYMKGKEDRIAVLVGAVTDDTHVYEV 10
           +SLSRL+RYM GKE +IAV+VG VTDD  VYEV
Sbjct: 172 LSLSRLVRYMDGKEGKIAVVVGTVTDDLRVYEV 204


>ref|NP_001236701.1| uncharacterized protein LOC100306301 [Glycine max]
           gi|255628147|gb|ACU14418.1| unknown [Glycine max]
          Length = 187

 Score =  109 bits (273), Expect(2) = 6e-33
 Identities = 54/62 (87%), Positives = 57/62 (91%)
 Frame = -1

Query: 298 GIDLIAGGKSKKAKRTGPKSDDIYLKLLVKMYRFLVRRTESRFNAVVLKRLFMSKINKPP 119
           GIDL AGGKSKK KRT PKSDDIYLKLLVK+YRFLVRRT S FNAVVLKRLFMSK+NKPP
Sbjct: 2   GIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPP 61

Query: 118 MS 113
           +S
Sbjct: 62  LS 63



 Score = 56.2 bits (134), Expect(2) = 6e-33
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 108 MSLSRLIRYMKGKEDRIAVLVGAVTDDTHVYEV 10
           +SLSRLIRY KGKED+IAV+VGAVTDD  VYEV
Sbjct: 62  LSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEV 94


>ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]
          Length = 429

 Score =  114 bits (284), Expect(2) = 1e-32
 Identities = 53/66 (80%), Positives = 62/66 (93%)
 Frame = -1

Query: 310 IVSQGIDLIAGGKSKKAKRTGPKSDDIYLKLLVKMYRFLVRRTESRFNAVVLKRLFMSKI 131
           +++ GIDL+AGGKSKK KRT PKSDDIYLKLLVK+YRFLVRRT S+FNAV+LKRLFMSK+
Sbjct: 240 LLTMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKV 299

Query: 130 NKPPMS 113
           NKPP+S
Sbjct: 300 NKPPLS 305



 Score = 51.2 bits (121), Expect(2) = 1e-32
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -2

Query: 108 MSLSRLIRYMKGKEDRIAVLVGAVTDDTHVYEV 10
           +SLSRL+RYM GKE +IAV+VG VTDD  VYEV
Sbjct: 304 LSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEV 336


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