BLASTX nr result
ID: Coptis25_contig00002788
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002788 (1188 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p... 446 e-123 ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot... 445 e-123 ref|NP_001050445.1| Os03g0437600 [Oryza sativa Japonica Group] g... 444 e-122 gb|AFK41000.1| unknown [Medicago truncatula] 441 e-121 ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [M... 441 e-121 >ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus communis] gi|223535801|gb|EEF37463.1| sigma factor sigb regulation protein rsbq, putative [Ricinus communis] Length = 270 Score = 446 bits (1148), Expect = e-123 Identities = 215/270 (79%), Positives = 244/270 (90%) Frame = +3 Query: 156 MGIVEEAHNLRVLGTGEKIIVLAHGFGTDQSVWKHLVPHLVNEYRVVLFDNMGAGPTNPD 335 MGIVEEAHN+++LGTGE++IVLAHGFGTDQSVWKHLVPHL+++++VVLFDNMGAG TNPD Sbjct: 1 MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60 Query: 336 YFDFERYSTLEGYAYDLLAILEELQVGSCIFXXXXXXXXXXXXXXXNRPDLFSKLVLISA 515 YFDFERY+ LEGYAYDLLAILEELQV SC+F +RPDLF+K+V+ISA Sbjct: 61 YFDFERYAGLEGYAYDLLAILEELQVESCVFVGHSVSAMVGVVASISRPDLFTKIVMISA 120 Query: 516 SPRYLNDADYYGGFEQEDLDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 695 SPRYLND DYYGGFEQEDL+QLFEA+ +NYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN Sbjct: 121 SPRYLNDVDYYGGFEQEDLNQLFEAMEANYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180 Query: 696 IRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVEV 875 +RPDIALSVAQTIFQSD+R L +VSVPCHI+QS KDLAVPVVVSEYLH++LGSESI EV Sbjct: 181 MRPDIALSVAQTIFQSDMRSILHMVSVPCHIVQSGKDLAVPVVVSEYLHQNLGSESIAEV 240 Query: 876 MSSDGHLPQLSSPDIVVPVLLRHIRHDIEA 965 MS+DGHLPQLSSPD+V+PVLLRHIRH+I A Sbjct: 241 MSTDGHLPQLSSPDVVIPVLLRHIRHNITA 270 >ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis vinifera] gi|147783136|emb|CAN70905.1| hypothetical protein VITISV_044176 [Vitis vinifera] gi|147795384|emb|CAN74235.1| hypothetical protein VITISV_040226 [Vitis vinifera] Length = 270 Score = 445 bits (1145), Expect = e-123 Identities = 219/268 (81%), Positives = 239/268 (89%) Frame = +3 Query: 156 MGIVEEAHNLRVLGTGEKIIVLAHGFGTDQSVWKHLVPHLVNEYRVVLFDNMGAGPTNPD 335 MGIVEEAHNL+V+G+GE+IIVLAHGFGTDQS+WKHLVPHLV++YRV+LFDNMGAG TNP+ Sbjct: 1 MGIVEEAHNLKVVGSGEQIIVLAHGFGTDQSLWKHLVPHLVDDYRVILFDNMGAGTTNPE 60 Query: 336 YFDFERYSTLEGYAYDLLAILEELQVGSCIFXXXXXXXXXXXXXXXNRPDLFSKLVLISA 515 YFDFERYS LEGYAYD+LAILEELQV SCIF RPDLFSKL+ I+ Sbjct: 61 YFDFERYSNLEGYAYDVLAILEELQVQSCIFVGHSVSAMIGAIASITRPDLFSKLISING 120 Query: 516 SPRYLNDADYYGGFEQEDLDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 695 SPRYLND DYYGGFEQEDLDQLFEA+GSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN Sbjct: 121 SPRYLNDVDYYGGFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180 Query: 696 IRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVEV 875 +RPDIALSVAQTIFQ DLR L V+VPCHILQS KDLAVPVVVSEYLH++LG ESIVEV Sbjct: 181 MRPDIALSVAQTIFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEV 240 Query: 876 MSSDGHLPQLSSPDIVVPVLLRHIRHDI 959 M+SDGHLPQLSSPDIVVPVLLRHIR++I Sbjct: 241 MTSDGHLPQLSSPDIVVPVLLRHIRYNI 268 >ref|NP_001050445.1| Os03g0437600 [Oryza sativa Japonica Group] gi|108709023|gb|ABF96818.1| hydrolase, alpha/beta fold family protein, expressed [Oryza sativa Japonica Group] gi|113548916|dbj|BAF12359.1| Os03g0437600 [Oryza sativa Japonica Group] gi|215679017|dbj|BAG96447.1| unnamed protein product [Oryza sativa Japonica Group] gi|215692426|dbj|BAG87846.1| unnamed protein product [Oryza sativa Japonica Group] gi|215737519|dbj|BAG96649.1| unnamed protein product [Oryza sativa Japonica Group] Length = 271 Score = 444 bits (1142), Expect = e-122 Identities = 218/269 (81%), Positives = 240/269 (89%), Gaps = 1/269 (0%) Frame = +3 Query: 156 MGIVEEAHNLRVLGTGEK-IIVLAHGFGTDQSVWKHLVPHLVNEYRVVLFDNMGAGPTNP 332 MGIVEEAHNLRV+G G++ +IVLAHGFGTDQSVWKHLVPHLV +YRVVLFD MGAGPTNP Sbjct: 1 MGIVEEAHNLRVVGEGKRGVIVLAHGFGTDQSVWKHLVPHLVADYRVVLFDTMGAGPTNP 60 Query: 333 DYFDFERYSTLEGYAYDLLAILEELQVGSCIFXXXXXXXXXXXXXXXNRPDLFSKLVLIS 512 DYFDF RY+TLEGYA DLLAIL+EL+V SCI+ +RPDLFSKLVL+S Sbjct: 61 DYFDFSRYATLEGYALDLLAILQELRVASCIYVGHSVSAVIGAIASISRPDLFSKLVLLS 120 Query: 513 ASPRYLNDADYYGGFEQEDLDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLF 692 ASPRYLND DYYGGFEQEDLD+LFEA+GSNYKAWCSGFAPL VGGDM+SVAVQEFSRTLF Sbjct: 121 ASPRYLNDVDYYGGFEQEDLDELFEAMGSNYKAWCSGFAPLCVGGDMESVAVQEFSRTLF 180 Query: 693 NIRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVE 872 NIRPDIALSVAQTIFQSD+R L LV+VPCHI+QSTKDLAVPVVVSEYLH+HLG +SIVE Sbjct: 181 NIRPDIALSVAQTIFQSDVRSLLPLVTVPCHIVQSTKDLAVPVVVSEYLHKHLGGDSIVE 240 Query: 873 VMSSDGHLPQLSSPDIVVPVLLRHIRHDI 959 VM S+GHLPQLSSPDIV+PVLLRHI+HDI Sbjct: 241 VMPSEGHLPQLSSPDIVIPVLLRHIQHDI 269 >gb|AFK41000.1| unknown [Medicago truncatula] Length = 270 Score = 441 bits (1135), Expect = e-121 Identities = 209/270 (77%), Positives = 243/270 (90%) Frame = +3 Query: 156 MGIVEEAHNLRVLGTGEKIIVLAHGFGTDQSVWKHLVPHLVNEYRVVLFDNMGAGPTNPD 335 MGIVEEAHN++VLG+G + IVLAHGFGTDQSVWKHLVPHL++E+RV+L+DNMGAG TNPD Sbjct: 1 MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60 Query: 336 YFDFERYSTLEGYAYDLLAILEELQVGSCIFXXXXXXXXXXXXXXXNRPDLFSKLVLISA 515 YFDFERYSTLEGYAYDLLAILEEL+V SCIF +RPDLF+K++LISA Sbjct: 61 YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120 Query: 516 SPRYLNDADYYGGFEQEDLDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 695 SPRYLND DY+GGFEQEDLDQLF+A+ SNYK+WCSGFAP+AVGGDM+SVAVQEFSRTLFN Sbjct: 121 SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180 Query: 696 IRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVEV 875 +RPDIALSV QTIF+SD+R L +V+VPCHI+QS KDLAVPVVV+EYLH+H+GSESIVEV Sbjct: 181 MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240 Query: 876 MSSDGHLPQLSSPDIVVPVLLRHIRHDIEA 965 MS++GHLPQLSSPD+VVPV+L+HIRHDI A Sbjct: 241 MSTEGHLPQLSSPDVVVPVILKHIRHDIAA 270 >ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [Medicago truncatula] gi|355509512|gb|AES90654.1| Sigma factor sigB regulation protein rsbQ [Medicago truncatula] Length = 270 Score = 441 bits (1134), Expect = e-121 Identities = 208/270 (77%), Positives = 243/270 (90%) Frame = +3 Query: 156 MGIVEEAHNLRVLGTGEKIIVLAHGFGTDQSVWKHLVPHLVNEYRVVLFDNMGAGPTNPD 335 MGIVEEAHN++VLG+G + IVLAHGFGTDQSVWKHLVPHL++E+RV+L+DNMGAG TNPD Sbjct: 1 MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60 Query: 336 YFDFERYSTLEGYAYDLLAILEELQVGSCIFXXXXXXXXXXXXXXXNRPDLFSKLVLISA 515 YFDFERYSTLEGYAYDLLAILEEL+V SCIF +RPDLF+K++LISA Sbjct: 61 YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120 Query: 516 SPRYLNDADYYGGFEQEDLDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 695 SPRYLND DY+GGFEQEDLDQLF+A+ SNYK+WCSGFAP+AVGGDM+SVAVQEFSRTLFN Sbjct: 121 SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180 Query: 696 IRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVEV 875 +RPDIALSV QTIF+SD+R L +V+VPCHI+QS KDLAVPVVV+EYLH+H+GSESIVEV Sbjct: 181 MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240 Query: 876 MSSDGHLPQLSSPDIVVPVLLRHIRHDIEA 965 MS++GHLPQLSSPD+V+PV+L+HIRHDI A Sbjct: 241 MSTEGHLPQLSSPDVVIPVILKHIRHDIAA 270