BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002784
         (1586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   598   e-168
emb|CBI15328.3| unnamed protein product [Vitis vinifera]              598   e-168
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...   580   e-163
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...   572   e-160
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...   572   e-160

>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  598 bits (1542), Expect = e-168
 Identities = 291/442 (65%), Positives = 353/442 (79%)
 Frame = -3

Query: 1581 ITQELLKHTNEDSLPLPQRLDLHFSYIQLTPSLYLQVLNQSSEAGRSVLDFHQWVSTRPG 1402
            ++ ELLK  + + +P+ QRL L FS+I  +P L LQ LN S +AGR+VL F++W+S+ P 
Sbjct: 77   LSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPK 136

Query: 1401 FKHDDETFSYIVDYFGRRKDFKVIHDVLVSGKGITGSKTLASCIDRLVRAGRDSQTVAFF 1222
            F H DET S+ VDYFGRRKDFK IH+VL+ G+   G+KTL S IDRLVRAGR +Q V+FF
Sbjct: 137  FVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFF 196

Query: 1221 ERMEKEYGFVRDRDSLKLVVTALCDHGFASHAEKMVKSLANEFFPDEVTCDILVRGWCVD 1042
            +RME +YGF RDR+SL +VV+ LC+HGFASHAEK+VK++ANE FP+E  CD+L++GWCVD
Sbjct: 197  DRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVD 256

Query: 1041 GKLDEAKRLAGEMYRGGFELGTLAYNSILDCVCKLCRKKDPFRLQGEAEKILIEMDVAGI 862
            GKLDEA+RLA EM+RGGFE+GT+AYNSILDC+CKLCRKKDPFRL+ EAEKIL++MDVAG+
Sbjct: 257  GKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGV 316

Query: 861  PRNTETFNVLINNFCKIRKTEEALNLFERMGEWGCAPDSTTYLVMIRSLFQAARVGEGDE 682
            PRN ETFNVLI N CKIRKTE+A+ LF RMGEWGC P+ TT+LV+ RSL+QAARVGEGDE
Sbjct: 317  PRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDE 376

Query: 681  MIDRMKSAGFGDAIDKKAYYGFLKILCGIERIDHAMEIFKKMKFDGCKPGVPTYDLLIGK 502
            MIDRMKSAGFG+A+DKKAYY F+KILCGIERIDHAM +F KMK DGCKPG+ TYDLL+GK
Sbjct: 377  MIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGK 436

Query: 501  LGAHGRGERANTLFREAMKKELPVQPIVYKVDPRFAXXXXXXXXXXXXXXTLPEKMAXXX 322
            L AHGR ++AN LF EA+ + +PV+   YK+DPRF               TLPEKMA   
Sbjct: 437  LCAHGRLDKANALFSEAVNRGVPVESKAYKLDPRFV-KKPTVAKKEKKRETLPEKMARKR 495

Query: 321  XXXXXXXLSFVKKPTKMMRRAF 256
                   LSFVKKP K MRRAF
Sbjct: 496  RRLRKIRLSFVKKP-KRMRRAF 516


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  598 bits (1542), Expect = e-168
 Identities = 291/442 (65%), Positives = 353/442 (79%)
 Frame = -3

Query: 1581 ITQELLKHTNEDSLPLPQRLDLHFSYIQLTPSLYLQVLNQSSEAGRSVLDFHQWVSTRPG 1402
            ++ ELLK  + + +P+ QRL L FS+I  +P L LQ LN S +AGR+VL F++W+S+ P 
Sbjct: 93   LSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPK 152

Query: 1401 FKHDDETFSYIVDYFGRRKDFKVIHDVLVSGKGITGSKTLASCIDRLVRAGRDSQTVAFF 1222
            F H DET S+ VDYFGRRKDFK IH+VL+ G+   G+KTL S IDRLVRAGR +Q V+FF
Sbjct: 153  FVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFF 212

Query: 1221 ERMEKEYGFVRDRDSLKLVVTALCDHGFASHAEKMVKSLANEFFPDEVTCDILVRGWCVD 1042
            +RME +YGF RDR+SL +VV+ LC+HGFASHAEK+VK++ANE FP+E  CD+L++GWCVD
Sbjct: 213  DRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVD 272

Query: 1041 GKLDEAKRLAGEMYRGGFELGTLAYNSILDCVCKLCRKKDPFRLQGEAEKILIEMDVAGI 862
            GKLDEA+RLA EM+RGGFE+GT+AYNSILDC+CKLCRKKDPFRL+ EAEKIL++MDVAG+
Sbjct: 273  GKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGV 332

Query: 861  PRNTETFNVLINNFCKIRKTEEALNLFERMGEWGCAPDSTTYLVMIRSLFQAARVGEGDE 682
            PRN ETFNVLI N CKIRKTE+A+ LF RMGEWGC P+ TT+LV+ RSL+QAARVGEGDE
Sbjct: 333  PRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDE 392

Query: 681  MIDRMKSAGFGDAIDKKAYYGFLKILCGIERIDHAMEIFKKMKFDGCKPGVPTYDLLIGK 502
            MIDRMKSAGFG+A+DKKAYY F+KILCGIERIDHAM +F KMK DGCKPG+ TYDLL+GK
Sbjct: 393  MIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGK 452

Query: 501  LGAHGRGERANTLFREAMKKELPVQPIVYKVDPRFAXXXXXXXXXXXXXXTLPEKMAXXX 322
            L AHGR ++AN LF EA+ + +PV+   YK+DPRF               TLPEKMA   
Sbjct: 453  LCAHGRLDKANALFSEAVNRGVPVESKAYKLDPRFV-KKPTVAKKEKKRETLPEKMARKR 511

Query: 321  XXXXXXXLSFVKKPTKMMRRAF 256
                   LSFVKKP K MRRAF
Sbjct: 512  RRLRKIRLSFVKKP-KRMRRAF 532


>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Glycine max]
          Length = 509

 Score =  580 bits (1496), Expect = e-163
 Identities = 284/440 (64%), Positives = 336/440 (76%)
 Frame = -3

Query: 1581 ITQELLKHTNEDSLPLPQRLDLHFSYIQLTPSLYLQVLNQSSEAGRSVLDFHQWVSTRPG 1402
            ++ ELLK  + D+L + QRL+L FS+I  TP+L LQ LN S +AGR+VL FHQW+S+ P 
Sbjct: 70   LSSELLKEPDSDALSVSQRLNLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQ 129

Query: 1401 FKHDDETFSYIVDYFGRRKDFKVIHDVLVSGKGITGSKTLASCIDRLVRAGRDSQTVAFF 1222
            F H D+T SY VDYFGRRKDFK  HDVL +     G KTLAS IDRLVRAGR SQ V FF
Sbjct: 130  FSHTDDTLSYFVDYFGRRKDFKATHDVLAAASPAAGPKTLASAIDRLVRAGRSSQAVQFF 189

Query: 1221 ERMEKEYGFVRDRDSLKLVVTALCDHGFASHAEKMVKSLANEFFPDEVTCDILVRGWCVD 1042
            ERME++YG  RDRDSLK+VV  LC  GFAS+AEKMVK LA EFFPDE TCD+L+RGWC+D
Sbjct: 190  ERMERDYGLKRDRDSLKVVVEKLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWCID 249

Query: 1041 GKLDEAKRLAGEMYRGGFELGTLAYNSILDCVCKLCRKKDPFRLQGEAEKILIEMDVAGI 862
            GKLDEA+RLAGEMYRGGF+LG  AYN++LDCVCKLCR+KDPF+L  EAEK+L+EM+  G+
Sbjct: 250  GKLDEAQRLAGEMYRGGFDLGVGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGV 309

Query: 861  PRNTETFNVLINNFCKIRKTEEALNLFERMGEWGCAPDSTTYLVMIRSLFQAARVGEGDE 682
            PRNTETFNVLI N CKIRKTE+AL L   MGEWGC P+ TT+LV+IRSL+QAAR+ EGDE
Sbjct: 310  PRNTETFNVLITNLCKIRKTEDALGLLHSMGEWGCYPNETTFLVLIRSLYQAARLEEGDE 369

Query: 681  MIDRMKSAGFGDAIDKKAYYGFLKILCGIERIDHAMEIFKKMKFDGCKPGVPTYDLLIGK 502
            MIDRM+SAGFG+ +DKKAYY FLKILCGIER+DHA+ +F  MK DGC+PGV TYDLL+GK
Sbjct: 370  MIDRMRSAGFGEFLDKKAYYQFLKILCGIERVDHALSVFAMMKDDGCEPGVITYDLLMGK 429

Query: 501  LGAHGRGERANTLFREAMKKELPVQPIVYKVDPRFAXXXXXXXXXXXXXXTLPEKMAXXX 322
            LGAH R ++ N LF EA  + LPV    Y VDPR+               TLPEKMA   
Sbjct: 430  LGAHNRIDKVNALFNEAKSRGLPVILKEYAVDPRYLKKKKKVVKGVKKRETLPEKMARKR 489

Query: 321  XXXXXXXLSFVKKPTKMMRR 262
                   LS+VKKP ++M R
Sbjct: 490  SRLKQIRLSYVKKPKRVMGR 509


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
            gi|449477122|ref|XP_004154936.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
          Length = 522

 Score =  572 bits (1473), Expect = e-160
 Identities = 276/442 (62%), Positives = 334/442 (75%)
 Frame = -3

Query: 1581 ITQELLKHTNEDSLPLPQRLDLHFSYIQLTPSLYLQVLNQSSEAGRSVLDFHQWVSTRPG 1402
            +  ELLK  + D LP+ QRL L FS+++  P L    LN SSEAGR+VL F++W+ + P 
Sbjct: 82   LASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPD 141

Query: 1401 FKHDDETFSYIVDYFGRRKDFKVIHDVLVSGKGITGSKTLASCIDRLVRAGRDSQTVAFF 1222
            F H DET SY VD+FGRRKDF  + +VL  G GI G KTL S I R  RAGR ++ ++FF
Sbjct: 142  FHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFF 201

Query: 1221 ERMEKEYGFVRDRDSLKLVVTALCDHGFASHAEKMVKSLANEFFPDEVTCDILVRGWCVD 1042
            E ME  YG  RD++SL++VV  LC++GF SHAEKMVK LANEFFPDE  CD L++GWCV+
Sbjct: 202  ETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVN 261

Query: 1041 GKLDEAKRLAGEMYRGGFELGTLAYNSILDCVCKLCRKKDPFRLQGEAEKILIEMDVAGI 862
             KLDEAKRLAGEMYRGGFELGT AYN++LDCVCKLCRKKDPFRL  EAE+IL+EMD  G+
Sbjct: 262  EKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGV 321

Query: 861  PRNTETFNVLINNFCKIRKTEEALNLFERMGEWGCAPDSTTYLVMIRSLFQAARVGEGDE 682
            PRN ETFNVLINN CKIR+T +A+NLF RMGEWGC P++ T+L++IRSL+QAAR GEGDE
Sbjct: 322  PRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDE 381

Query: 681  MIDRMKSAGFGDAIDKKAYYGFLKILCGIERIDHAMEIFKKMKFDGCKPGVPTYDLLIGK 502
            MIDRMKS G+GDA+DKKAYY F+ ILCGIERIDHA+ +F KMK DGC+PG+ TYDLL+GK
Sbjct: 382  MIDRMKSVGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGK 441

Query: 501  LGAHGRGERANTLFREAMKKELPVQPIVYKVDPRFAXXXXXXXXXXXXXXTLPEKMAXXX 322
            L AH R ++AN+LF EA K+ +PV P  Y+VDP++               TLPEKMA   
Sbjct: 442  LCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYV-KKPKDKKVAKKRETLPEKMARKR 500

Query: 321  XXXXXXXLSFVKKPTKMMRRAF 256
                   LSFVKKP + MRRAF
Sbjct: 501  RRLKQIRLSFVKKPRRGMRRAF 522


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  572 bits (1473), Expect = e-160
 Identities = 275/444 (61%), Positives = 344/444 (77%), Gaps = 2/444 (0%)
 Frame = -3

Query: 1581 ITQELLKHTNEDSLPLPQRLDLHFSYIQ--LTPSLYLQVLNQSSEAGRSVLDFHQWVSTR 1408
            I+ EL+K+ N DSL + QRL+LHFS+I   +TPS+ LQ LN S +AGR+VL FHQW+   
Sbjct: 127  ISAELIKNPNSDSLSILQRLNLHFSHINNSITPSIILQTLNLSPDAGRTVLGFHQWLVKV 186

Query: 1407 PGFKHDDETFSYIVDYFGRRKDFKVIHDVLVSGKGITGSKTLASCIDRLVRAGRDSQTVA 1228
              FK+ DET S+ +DYFGRRKDF+  H++L   K + G K   S ++RLVRAGR ++ + 
Sbjct: 187  ANFKNTDETISFFIDYFGRRKDFQSTHELLCDSKDVIGYKCFESMVNRLVRAGRATKVMG 246

Query: 1227 FFERMEKEYGFVRDRDSLKLVVTALCDHGFASHAEKMVKSLANEFFPDEVTCDILVRGWC 1048
            FF+RME++YGF RDR++L+LVV  LCD+G+AS+AEKMVK+LANE FPDE  CD+L++GWC
Sbjct: 247  FFDRMERDYGFKRDRENLRLVVKMLCDNGYASYAEKMVKNLANEIFPDENICDLLIKGWC 306

Query: 1047 VDGKLDEAKRLAGEMYRGGFELGTLAYNSILDCVCKLCRKKDPFRLQGEAEKILIEMDVA 868
            VDGKLDEAKRLAGEMYRGGFE+GT+AYN+ILDCVCKLCR+KDPF+++ E EK+L+EMD  
Sbjct: 307  VDGKLDEAKRLAGEMYRGGFEIGTVAYNAILDCVCKLCREKDPFKIESEVEKVLVEMDTR 366

Query: 867  GIPRNTETFNVLINNFCKIRKTEEALNLFERMGEWGCAPDSTTYLVMIRSLFQAARVGEG 688
            G+PRN ETFNVLI N CK+RKT++ALNLF RM EWGC PD TT+LV+IRSL+QAARVGEG
Sbjct: 367  GVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEG 426

Query: 687  DEMIDRMKSAGFGDAIDKKAYYGFLKILCGIERIDHAMEIFKKMKFDGCKPGVPTYDLLI 508
            DEMIDRMKS+G+G+ +DKKAYYGFLKILCGIER++HA+ +F+ MK DGCKPG+ TYDLLI
Sbjct: 427  DEMIDRMKSSGYGNKLDKKAYYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLLI 486

Query: 507  GKLGAHGRGERANTLFREAMKKELPVQPIVYKVDPRFAXXXXXXXXXXXXXXTLPEKMAX 328
            GK     R ++ N LF EA++  +PV P  YKVD ++               TLPEKMA 
Sbjct: 487  GKWCTRNRVDKGNALFNEALRNGVPVAPKEYKVDEKY-MKKPKAVKKEKKRETLPEKMAR 545

Query: 327  XXXXXXXXXLSFVKKPTKMMRRAF 256
                     LSFVKKP KMMRR F
Sbjct: 546  KRRRLKQIRLSFVKKPKKMMRRPF 569