BLASTX nr result

ID: Coptis25_contig00002774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002774
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...    99   5e-24
ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251...    92   7e-24
emb|CBI27491.3| unnamed protein product [Vitis vinifera]               92   1e-23
ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...    83   3e-20
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...    86   1e-19

>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score = 98.6 bits (244), Expect(2) = 5e-24
 Identities = 48/132 (36%), Positives = 80/132 (60%)
 Frame = -1

Query: 534  RKKDGNHYLVYPWVRVNGQWLENIDKKFLTRTGDLFCLDAHHLAVAARGYWISEVISVGL 355
            RK+  N  L++  +  +  WL  +D +F+ RTG L  +DA   A AAR YW SE++SVG 
Sbjct: 2111 RKQCKNLNLIHALLIPDANWLRAVDDRFIRRTGKLVYVDADQFASAARSYWSSELLSVGT 2170

Query: 354  GVLKTLDALHKFSVQNSFSKFCQGRVLLHIYQVTKHVMEFSKWRVGTSELQKVPKFLETS 175
             VL+ L+ L+ +S   S S FCQ ++L+H+++V++ +++     +  +  + + KFL+ S
Sbjct: 2171 KVLENLEVLYNYSTWKSLSLFCQSKLLVHMFEVSEFLLKLKFLDLRYNAARTLQKFLDIS 2230

Query: 174  KRNFLGIVFPLD 139
             R F   +FPLD
Sbjct: 2231 TRQFCSKIFPLD 2242



 Score = 37.4 bits (85), Expect(2) = 5e-24
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -3

Query: 121  KNMVSLRATKVFGDLLHEVLIENVDFKLKLTYGKIG 14
            +NMVSLR T++  +LL EV+  ++  K + TYG+IG
Sbjct: 2249 ENMVSLRETELSRNLLEEVISTSISIKSEFTYGQIG 2284


>ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251075 [Vitis vinifera]
          Length = 2818

 Score = 92.4 bits (228), Expect(2) = 7e-24
 Identities = 46/134 (34%), Positives = 73/134 (54%)
 Frame = -1

Query: 531  KKDGNHYLVYPWVRVNGQWLENIDKKFLTRTGDLFCLDAHHLAVAARGYWISEVISVGLG 352
            K+   + ++YP       W+   D +FL R G L  +DA     AAR YW +E++SVG+ 
Sbjct: 2209 KRTPLYLVLYP----EADWVRKTDDRFLHRNGKLVFIDASQFVSAARSYWCAELLSVGIK 2264

Query: 351  VLKTLDALHKFSVQNSFSKFCQGRVLLHIYQVTKHVMEFSKWRVGTSELQKVPKFLETSK 172
            +L+ L+ L++F  +NSF  FCQ   L++I+ VT  +M+           + +  FLE S 
Sbjct: 2265 ILEILENLYQFCTRNSFPVFCQSIPLIYIFDVTNFLMKTGSLHCWHPHAETLQMFLEKSS 2324

Query: 171  RNFLGIVFPLDKRQ 130
              F G ++PLD R+
Sbjct: 2325 ERFFGYIYPLDWRK 2338



 Score = 43.1 bits (100), Expect(2) = 7e-24
 Identities = 20/39 (51%), Positives = 29/39 (74%)
 Frame = -3

Query: 121  KNMVSLRATKVFGDLLHEVLIENVDFKLKLTYGKIGWTV 5
            ++MVSLR  K+ G+LL EV+++N+  K  LTYG+IG  V
Sbjct: 2342 EDMVSLRENKLAGNLLREVILKNISLKGNLTYGQIGRAV 2380


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score = 92.4 bits (228), Expect(2) = 1e-23
 Identities = 46/134 (34%), Positives = 73/134 (54%)
 Frame = -1

Query: 531  KKDGNHYLVYPWVRVNGQWLENIDKKFLTRTGDLFCLDAHHLAVAARGYWISEVISVGLG 352
            K+   + ++YP       W+   D +FL R G L  +DA     AAR YW +E++SVG+ 
Sbjct: 2936 KRTPLYLVLYP----EADWVRKTDDRFLHRNGKLVFIDASQFVSAARSYWCAELLSVGIK 2991

Query: 351  VLKTLDALHKFSVQNSFSKFCQGRVLLHIYQVTKHVMEFSKWRVGTSELQKVPKFLETSK 172
            +L+ L+ L++F  +NSF  FCQ   L++I+ VT  +M+           + +  FLE S 
Sbjct: 2992 ILEILENLYQFCTRNSFPVFCQSIPLIYIFDVTNFLMKTGSLHCWHPHAETLQMFLEKSS 3051

Query: 171  RNFLGIVFPLDKRQ 130
              F G ++PLD R+
Sbjct: 3052 ERFFGYIYPLDWRK 3065



 Score = 42.4 bits (98), Expect(2) = 1e-23
 Identities = 20/39 (51%), Positives = 28/39 (71%)
 Frame = -3

Query: 121  KNMVSLRATKVFGDLLHEVLIENVDFKLKLTYGKIGWTV 5
            ++MVSLR  K+ G+LL EV ++N+  K  LTYG+IG  V
Sbjct: 3069 EDMVSLRENKLAGNLLREVFLKNISLKGNLTYGQIGRAV 3107



 Score = 58.5 bits (140), Expect(2) = 5e-10
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
 Frame = -1

Query: 510  LVYPWVRVNGQWLENIDKKF----LTRTGDL--------FCLDAHHLAVAARG-----YW 382
            L+Y W      W ENI        L  T D+        FCL+  +L V  +      YW
Sbjct: 5466 LLYSW----NVWKENIVNVLEFLGLDETQDVKDYASYGEFCLN--YLGVRKQSKNLNSYW 5519

Query: 381  ISEVISVGLGVLKTLDALHKFSVQNSFSKFCQGRVLLHIYQVTKHVMEFSKWRVGTSELQ 202
             SE+ S+G  VL+ L  L+  S   S S FCQ + L+H+++V K +++           +
Sbjct: 5520 SSELFSIGTKVLENLKVLYNHSTGKSLSLFCQSKSLIHMFEVAKFLLKLKFLDRRCHAAR 5579

Query: 201  KVPKFLETSKRNFLGIVFPLD 139
             + KFL      F   VFPLD
Sbjct: 5580 TLQKFLNILTEQFCSKVFPLD 5600



 Score = 30.0 bits (66), Expect(2) = 5e-10
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 121  KNMVSLRATKVFGDLLHEVLIENVDFKLKLTYGKIG 14
            +NMVSLR T++   L  + +  ++  K +LT+G+IG
Sbjct: 5607 ENMVSLRETELSRILFKKAISTSISMKNELTHGQIG 5642


>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score = 83.2 bits (204), Expect(2) = 3e-20
 Identities = 46/132 (34%), Positives = 69/132 (52%)
 Frame = -1

Query: 534  RKKDGNHYLVYPWVRVNGQWLENIDKKFLTRTGDLFCLDAHHLAVAARGYWISEVISVGL 355
            RK+  N   +Y  +     W+  +  +FL + G L  +D   L  AA  YW S+++SVG+
Sbjct: 2127 RKQTSNLNDIYILLIPEANWVMKLGDRFLKKNGRLVSVDVQDLVSAAESYWSSQLVSVGM 2186

Query: 354  GVLKTLDALHKFSVQNSFSKFCQGRVLLHIYQVTKHVMEFSKWRVGTSELQKVPKFLETS 175
             VL  LDAL+KFS   + S+FCQ R L  IY V K +++   + +    L+ + KF  T 
Sbjct: 2187 KVLHILDALYKFSASKALSEFCQFRSLFLIYDVFKFLLKSKCFNLNHGNLKTLEKFSRTP 2246

Query: 174  KRNFLGIVFPLD 139
                L  + PLD
Sbjct: 2247 IDRSLCYLVPLD 2258



 Score = 40.0 bits (92), Expect(2) = 3e-20
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = -3

Query: 157  YCISARQATEMMKNMVSLRATKVFGDLLHEVLIENVDFKLKLTYGKIG 14
            Y +    +  ++K+MV LR T+   DL+ +V+ EN++ K  LTYG+IG
Sbjct: 2253 YLVPLDWSKSLIKDMVYLRTTETCQDLVKDVIYENINRKDMLTYGQIG 2300


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score = 85.5 bits (210), Expect(2) = 1e-19
 Identities = 44/135 (32%), Positives = 73/135 (54%)
 Frame = -1

Query: 534  RKKDGNHYLVYPWVRVNGQWLENIDKKFLTRTGDLFCLDAHHLAVAARGYWISEVISVGL 355
            R++  N   VY  +  N  W++ +D +F+   G    LD +    AA+ YW SE++SVG+
Sbjct: 2137 RRQFNNLDAVYLLLVPNAYWVKELDNRFMKSNGKFLSLDVNQFISAAQSYWCSELLSVGM 2196

Query: 354  GVLKTLDALHKFSVQNSFSKFCQGRVLLHIYQVTKHVMEFSKWRVGTSELQKVPKFLETS 175
             VL  L AL+  S++N  S FCQ R+L+HIY V K ++          + + + +F+  S
Sbjct: 2197 DVLVKLKALYNLSIKNYLSLFCQSRLLIHIYAVAKFLLGSKFLDRRHHDKKALLEFVWLS 2256

Query: 174  KRNFLGIVFPLDKRQ 130
              +  G ++PL  R+
Sbjct: 2257 TEHLFGCIYPLHWRE 2271



 Score = 35.8 bits (81), Expect(2) = 1e-19
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -3

Query: 154  CISARQATEMMK-NMVSLRATKVFGDLLHEVLIENVDFKLKLTYGKIG 14
            CI      E +K NM+SLR T+ F +L+ E   E V F   L+YG++G
Sbjct: 2263 CIYPLHWRESLKENMISLRRTEFFRNLIKENTSETVSFASMLSYGQLG 2310


Top