BLASTX nr result
ID: Coptis25_contig00002766
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002766
(702 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus co... 186 4e-45
ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla... 182 4e-44
ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|2... 180 2e-43
ref|XP_003601652.1| Cysteine desulfurase [Medicago truncatula] g... 176 4e-42
ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloropla... 174 2e-41
>ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus communis]
gi|223537525|gb|EEF39150.1| cysteine desulfurylase,
putative [Ricinus communis]
Length = 469
Score = 186 bits (472), Expect = 4e-45
Identities = 90/112 (80%), Positives = 101/112 (90%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 QKIHDYEIELATYLHESLRVIPNVRIYGPVPSEHVSRAALCSFNVENIHPTDIATFLDQE 180
QKIHDYE+ELA YL+ESL +P+VRIYGP PSE+V RAALCSFNVENIHPTDIATFLDQ+
Sbjct: 354 QKIHDYEMELANYLYESLSSVPSVRIYGPKPSENVHRAALCSFNVENIHPTDIATFLDQQ 413
Query: 181 YGVAIRSGHHCAQPLHRYLGINASVCASLHFYNTK-DVDAFIRALKGTIDFF 333
+GVAIRSGHHCAQPLHR+LG+NAS ASLHFYNTK DVD FI+AL TI+FF
Sbjct: 414 HGVAIRSGHHCAQPLHRHLGVNASARASLHFYNTKEDVDDFIQALNDTINFF 465
Score = 63.5 bits (153), Expect(2) = 4e-14
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 526 ELATYLHESLPSIPNVRIYGPVPSEHVCRAALCSFNVE 639
ELA YL+ESL S+P+VRIYGP PSE+V RAALCSFNVE
Sbjct: 362 ELANYLYESLSSVPSVRIYGPKPSENVHRAALCSFNVE 399
Score = 40.0 bits (92), Expect(2) = 4e-14
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3
Query: 645 NIHPTDIATFLDQEYGVAI 701
NIHPTDIATFLDQ++GVAI
Sbjct: 400 NIHPTDIATFLDQQHGVAI 418
>ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera]
gi|296083920|emb|CBI24308.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 182 bits (463), Expect = 4e-44
Identities = 87/112 (77%), Positives = 99/112 (88%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 QKIHDYEIELATYLHESLRVIPNVRIYGPVPSEHVSRAALCSFNVENIHPTDIATFLDQE 180
QKIHDYE++LA YL+ESLR +P V +YGP PS+ V RAALCSFNVENIHPTDIATFLDQ+
Sbjct: 348 QKIHDYEVDLANYLYESLRSVPGVHVYGPAPSQTVFRAALCSFNVENIHPTDIATFLDQQ 407
Query: 181 YGVAIRSGHHCAQPLHRYLGINASVCASLHFYNTK-DVDAFIRALKGTIDFF 333
+GVAIRSGHHCAQPLHR+LG++AS ASLHFYNTK DVDAFI AL TI+FF
Sbjct: 408 HGVAIRSGHHCAQPLHRHLGVSASARASLHFYNTKEDVDAFIHALVDTINFF 459
Score = 60.1 bits (144), Expect = 4e-07
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = +1
Query: 472 YLKANGMIKKGSRRN*RTELATYLHESLPSIPNVRIYGPVPSEHVCRAALCSFNVE 639
YL A GM K + +LA YL+ESL S+P V +YGP PS+ V RAALCSFNVE
Sbjct: 341 YLSAIGMQKI---HDYEVDLANYLYESLRSVPGVHVYGPAPSQTVFRAALCSFNVE 393
>ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|222850426|gb|EEE87973.1|
predicted protein [Populus trichocarpa]
Length = 469
Score = 180 bits (457), Expect = 2e-43
Identities = 85/112 (75%), Positives = 99/112 (88%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 QKIHDYEIELATYLHESLRVIPNVRIYGPVPSEHVSRAALCSFNVENIHPTDIATFLDQE 180
QKIH+YE+ELA YL+E+L +PN+RIYGP PS+ V+RAALCSFNV+NIHPTD+ATFLDQ+
Sbjct: 354 QKIHEYEMELANYLYENLSTVPNIRIYGPKPSKGVNRAALCSFNVKNIHPTDLATFLDQQ 413
Query: 181 YGVAIRSGHHCAQPLHRYLGINASVCASLHFYNTK-DVDAFIRALKGTIDFF 333
+GVAIRSGHHCAQPLHRYLGINAS ASL+FYNTK DVD FI AL T+ FF
Sbjct: 414 HGVAIRSGHHCAQPLHRYLGINASARASLYFYNTKEDVDYFIHALNDTVSFF 465
Score = 58.5 bits (140), Expect(2) = 2e-12
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +1
Query: 526 ELATYLHESLPSIPNVRIYGPVPSEHVCRAALCSFNVE 639
ELA YL+E+L ++PN+RIYGP PS+ V RAALCSFNV+
Sbjct: 362 ELANYLYENLSTVPNIRIYGPKPSKGVNRAALCSFNVK 399
Score = 39.3 bits (90), Expect(2) = 2e-12
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 645 NIHPTDIATFLDQEYGVAI 701
NIHPTD+ATFLDQ++GVAI
Sbjct: 400 NIHPTDLATFLDQQHGVAI 418
>ref|XP_003601652.1| Cysteine desulfurase [Medicago truncatula]
gi|355490700|gb|AES71903.1| Cysteine desulfurase
[Medicago truncatula]
Length = 117
Score = 176 bits (446), Expect = 4e-42
Identities = 81/112 (72%), Positives = 96/112 (85%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 QKIHDYEIELATYLHESLRVIPNVRIYGPVPSEHVSRAALCSFNVENIHPTDIATFLDQE 180
Q IH+YE+EL TYL+E L +PN+RIYGP PS+ V RA+LCSFNV+N+HPTD+ATFLDQ+
Sbjct: 2 QAIHEYEVELGTYLYERLLSVPNIRIYGPAPSKEVKRASLCSFNVDNLHPTDLATFLDQQ 61
Query: 181 YGVAIRSGHHCAQPLHRYLGINASVCASLHFYNTK-DVDAFIRALKGTIDFF 333
+GVAIRSGHHCAQPLHRYLG+NAS ASL+FYNTK DVD FI AL T+ FF
Sbjct: 62 HGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEDVDNFIHALHDTVSFF 113
Score = 59.3 bits (142), Expect = 7e-07
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +1
Query: 526 ELATYLHESLPSIPNVRIYGPVPSEHVCRAALCSFNVE 639
EL TYL+E L S+PN+RIYGP PS+ V RA+LCSFNV+
Sbjct: 10 ELGTYLYERLLSVPNIRIYGPAPSKEVKRASLCSFNVD 47
>ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloroplastic-like [Glycine max]
Length = 468
Score = 174 bits (440), Expect = 2e-41
Identities = 81/112 (72%), Positives = 94/112 (83%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 QKIHDYEIELATYLHESLRVIPNVRIYGPVPSEHVSRAALCSFNVENIHPTDIATFLDQE 180
Q IHDYE+EL YL+E L +PN+RIYGP PSE V RAALCSFNVEN+HPTD+AT LDQ+
Sbjct: 353 QTIHDYEVELGRYLYERLLSVPNIRIYGPAPSEKVERAALCSFNVENLHPTDLATLLDQQ 412
Query: 181 YGVAIRSGHHCAQPLHRYLGINASVCASLHFYNTK-DVDAFIRALKGTIDFF 333
+GVAIRSGHHCAQPLHRYLG+++S ASL+FYNTK DVD FI AL T+ FF
Sbjct: 413 HGVAIRSGHHCAQPLHRYLGVSSSARASLYFYNTKEDVDNFIHALNDTVSFF 464
Score = 60.1 bits (144), Expect(2) = 6e-12
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +1
Query: 526 ELATYLHESLPSIPNVRIYGPVPSEHVCRAALCSFNVE 639
EL YL+E L S+PN+RIYGP PSE V RAALCSFNVE
Sbjct: 361 ELGRYLYERLLSVPNIRIYGPAPSEKVERAALCSFNVE 398
Score = 36.2 bits (82), Expect(2) = 6e-12
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +3
Query: 645 NIHPTDIATFLDQEYGVAI 701
N+HPTD+AT LDQ++GVAI
Sbjct: 399 NLHPTDLATLLDQQHGVAI 417