BLASTX nr result

ID: Coptis25_contig00002758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002758
         (2388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|2...   447   e-123
ref|XP_002521202.1| translation initiation factor 2b, delta subu...   435   e-119
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...   433   e-118
emb|CBI16861.3| unnamed protein product [Vitis vinifera]              430   e-118
emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]   429   e-117

>ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|222870772|gb|EEF07903.1|
            predicted protein [Populus trichocarpa]
          Length = 634

 Score =  447 bits (1150), Expect = e-123
 Identities = 236/343 (68%), Positives = 266/343 (77%), Gaps = 5/343 (1%)
 Frame = +3

Query: 492  SGSNYPVASFTTVSAVKMA--DKG---LVETKNDRPTSSKPLKEKTSXXXXXXXXXXXXX 656
            + S+ P +  TTVS V     +KG    VE +ND+ + SK LKEKT+             
Sbjct: 130  AASSVPASGLTTVSVVNNLPIEKGGGVAVEMQNDQSSRSKSLKEKTTKAERRALQEAQRA 189

Query: 657  XXXXXXXXGGRHTGAIASGGPAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKK 836
                    GG+ T A ASG  A AK+ K V  P QK D+    V EKKG DRPPEKDRKK
Sbjct: 190  AKAAAKAEGGK-TPAAASGAAASAKSAKSVKPPSQKNDSATVAVSEKKGGDRPPEKDRKK 248

Query: 837  DIPPPRMQFDDKTRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDP 1016
            ++P PRMQ+DDK+RVEKAKRR+VVKQTEARNRVELFRHLPQYE  TQL  LESKFF+LDP
Sbjct: 249  EVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYERRTQLTELESKFFELDP 308

Query: 1017 MHPAVYKVGLQYLTGDVCGGNARCIAMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSF 1196
            MHPAVYKVGLQYL+GDVCGGNARCIAMLQAF+EAI DYSTP EK L RDLTAKI SY+SF
Sbjct: 309  MHPAVYKVGLQYLSGDVCGGNARCIAMLQAFQEAIKDYSTPSEKTLARDLTAKIGSYLSF 368

Query: 1197 MNECRPLSISMGNAIRFLKNRIAKLPLNLSEPEAKAILQSDIDRFINEKIVLADKVIVEH 1376
            + ECRPLSISMGNAIRFLKNRIAKLPL LSE E KA L SDIDRFINEKI+LADKVIV+H
Sbjct: 369  LIECRPLSISMGNAIRFLKNRIAKLPLTLSEAEVKATLHSDIDRFINEKIILADKVIVKH 428

Query: 1377 AVTKIRDGDVLLTHGASSVVEMILVYAHDIGKQFRVVVVDSRP 1505
            AVTKI DGDVLLT+G+ S VEM+L++AH++GKQFRVVVVDSRP
Sbjct: 429  AVTKISDGDVLLTYGSPSAVEMVLLHAHELGKQFRVVVVDSRP 471



 Score =  221 bits (562), Expect = 9e-55
 Identities = 106/128 (82%), Positives = 116/128 (90%)
 Frame = +2

Query: 1637 VFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDP 1816
            VFLGASSVL NGTVYSRVG+ACV+MVA AFRVPVL+CCEAYKFHERVQLDS+CSNELGDP
Sbjct: 507  VFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVLVCCEAYKFHERVQLDSLCSNELGDP 566

Query: 1817 DTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVRE 1996
            D ISKV GRED+N L+  +DSE LQLLNL YD TPSDY+SMIITDYGMVPPTSVPVIVR+
Sbjct: 567  DVISKVRGREDINLLDGSTDSENLQLLNLIYDATPSDYISMIITDYGMVPPTSVPVIVRD 626

Query: 1997 YMREPLWM 2020
            Y RE LW+
Sbjct: 627  YQREHLWI 634


>ref|XP_002521202.1| translation initiation factor 2b, delta subunit, putative [Ricinus
            communis] gi|223539567|gb|EEF41154.1| translation
            initiation factor 2b, delta subunit, putative [Ricinus
            communis]
          Length = 638

 Score =  435 bits (1119), Expect = e-119
 Identities = 232/345 (67%), Positives = 261/345 (75%), Gaps = 7/345 (2%)
 Frame = +3

Query: 492  SGSNYPVASFTTVSAVKMADKGLVE-------TKNDRPTSSKPLKEKTSXXXXXXXXXXX 650
            + S+ P +  TTVS       GL E        +N   ++ K LKEKT+           
Sbjct: 139  TSSSVPGSGLTTVSVFVNLPPGLDEKAGISTDVQNSNRSNLKRLKEKTTKAERRALQEAQ 198

Query: 651  XXXXXXXXXXGGRHTGAIASGGPAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDR 830
                      G     AI    PA+AK  K    P QK D  PT   EKKG + PPEKDR
Sbjct: 199  QAAKAAAKAEGA----AI----PANAKLAKSAKVPSQKNDNAPTAASEKKGGEHPPEKDR 250

Query: 831  KKDIPPPRMQFDDKTRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGTQLPNLESKFFQL 1010
            KKD+P PRMQ+DDK+RVEKAK+R+VVKQTEARNRVELFRHLPQYEHGTQLP+LESKFFQL
Sbjct: 251  KKDVPQPRMQYDDKSRVEKAKKRAVVKQTEARNRVELFRHLPQYEHGTQLPDLESKFFQL 310

Query: 1011 DPMHPAVYKVGLQYLTGDVCGGNARCIAMLQAFKEAITDYSTPPEKALVRDLTAKISSYV 1190
            DPMHPAVYKVGLQYL+GDVCGGNARCIAMLQAF+E I DYSTPPEK LVRDLTAKI SYV
Sbjct: 311  DPMHPAVYKVGLQYLSGDVCGGNARCIAMLQAFQEVINDYSTPPEKTLVRDLTAKIGSYV 370

Query: 1191 SFMNECRPLSISMGNAIRFLKNRIAKLPLNLSEPEAKAILQSDIDRFINEKIVLADKVIV 1370
            SF+ ECRPLSISMGNAIRFLKNRIAKLPL LSE EAKA L +DID FI EKI++ADKVIV
Sbjct: 371  SFLIECRPLSISMGNAIRFLKNRIAKLPLTLSEAEAKATLHADIDCFIYEKIIVADKVIV 430

Query: 1371 EHAVTKIRDGDVLLTHGASSVVEMILVYAHDIGKQFRVVVVDSRP 1505
            +HAVTKIRDGDVLLT+G+SS VEMIL++AH++GKQF+VVVVDSRP
Sbjct: 431  KHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFQVVVVDSRP 475



 Score =  206 bits (525), Expect = 2e-50
 Identities = 100/128 (78%), Positives = 111/128 (86%)
 Frame = +2

Query: 1637 VFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDP 1816
            V LGASSVL NGTVYSRVG+ACV+M+A AF VPVL+CCEAYKFHERVQLDSICSNELGDP
Sbjct: 511  VVLGASSVLSNGTVYSRVGTACVAMMAHAFHVPVLVCCEAYKFHERVQLDSICSNELGDP 570

Query: 1817 DTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVRE 1996
            D ISKV GR+++N L   + SE +QLLNL YD TPS+YVSMIITDYGMVPPTSVPVIVRE
Sbjct: 571  DAISKVHGRDEINFLGGCATSENMQLLNLIYDATPSEYVSMIITDYGMVPPTSVPVIVRE 630

Query: 1997 YMREPLWM 2020
            Y RE  W+
Sbjct: 631  YRREHWWI 638



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 43/106 (40%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
 Frame = +1

Query: 52  MDTRRVSRTVIDPKIRQVGFITPTSGPPPPLDRTQSGP-------------------ASN 174
           MD RR SRTV DPK+RQVGF TP +  P   DR+QSGP                   + N
Sbjct: 1   MDPRRASRTVSDPKVRQVGFFTPGASSP---DRSQSGPPDPHPISSSPPTITDLSPSSGN 57

Query: 175 SLPPVTIPPRRHASDNLTSVPVNVPMSPLRKISINENMPVGSYESS 312
           SL PV IPP RH         V+ P+SPL    + ++ P G+  +S
Sbjct: 58  SLSPVMIPPPRH---------VSAPLSPL----LRDSAPPGTMVNS 90


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Vitis vinifera]
          Length = 650

 Score =  433 bits (1113), Expect = e-118
 Identities = 233/341 (68%), Positives = 262/341 (76%), Gaps = 10/341 (2%)
 Frame = +3

Query: 513  ASFTTVSAVKM-------ADKGLVETKNDRPTSSKPLKEKTSXXXXXXXXXXXXXXXXXX 671
            ++ TTVS V M       +    +E +N++P SS+ LKEKTS                  
Sbjct: 149  SNLTTVSVVNMPPGISVKSGGASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAA 208

Query: 672  XXXGGRHTGAIASGGPA---HAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDI 842
                 +    IA+ G A   +AK  KV     QKKD+      EKKG DRPPEKDRKKD+
Sbjct: 209  KAEVSK--APIAASGVATSVNAKPAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDV 266

Query: 843  PPPRMQFDDKTRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMH 1022
            P PRMQFDDK+RVEKAKRR+VV+  E RNRVELFRHLPQYE GT LP+LESKFF LDPMH
Sbjct: 267  PHPRMQFDDKSRVEKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMH 326

Query: 1023 PAVYKVGLQYLTGDVCGGNARCIAMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMN 1202
            PAVYKVGLQYL GDV GGNARCIAMLQAF+EAI DYSTPPEK LVRDLTA++SSYVSF+ 
Sbjct: 327  PAVYKVGLQYLAGDVSGGNARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLI 386

Query: 1203 ECRPLSISMGNAIRFLKNRIAKLPLNLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAV 1382
            ECRPLSISMGNAIRFLK+RIAKLPL+LSE EAKA LQSDI+RFINEKIVLADKVIV HAV
Sbjct: 387  ECRPLSISMGNAIRFLKSRIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAV 446

Query: 1383 TKIRDGDVLLTHGASSVVEMILVYAHDIGKQFRVVVVDSRP 1505
            TKIRDGDVLLT+G+SS VEMIL+YAH++GKQFRVVVVDSRP
Sbjct: 447  TKIRDGDVLLTYGSSSAVEMILLYAHELGKQFRVVVVDSRP 487



 Score =  228 bits (582), Expect = 4e-57
 Identities = 109/128 (85%), Positives = 119/128 (92%)
 Frame = +2

Query: 1637 VFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDP 1816
            VFLGASSVL NGTVYSRVG+ACVSMVA AFRVPVL+CCEAYKF+ERVQLDSICSNELGDP
Sbjct: 523  VFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDP 582

Query: 1817 DTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVRE 1996
            D ISKVPGRE++N+L++W+ SE LQLLNL YD TPSDYVSMIITDYGMVPPTSVPVIVRE
Sbjct: 583  DAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVRE 642

Query: 1997 YMREPLWM 2020
            Y RE LW+
Sbjct: 643  YRREHLWI 650



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 53/106 (50%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
 Frame = +1

Query: 52  MDTRRVSRTVIDPKIRQVGFITP-------TSGPP----PPLDRTQSGPASNSLPPVTIP 198
           MD RR +R VIDPK+RQVGF  P        SGPP    PP+    + P  NSL PV IP
Sbjct: 1   MDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV--ADNSPTGNSLSPVMIP 58

Query: 199 PRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSQHFLGAS 333
           P RHASDNL S  P   P  PLR+    + +PVGSY  S+ F G S
Sbjct: 59  PPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHGTS 100


>emb|CBI16861.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  430 bits (1106), Expect = e-118
 Identities = 227/318 (71%), Positives = 253/318 (79%), Gaps = 3/318 (0%)
 Frame = +3

Query: 561  VETKNDRPTSSKPLKEKTSXXXXXXXXXXXXXXXXXXXXXGGRHTGAIASGGPA---HAK 731
            +E +N++P SS+ LKEKTS                       +    IA+ G A   +AK
Sbjct: 14   IEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSK--APIAASGVATSVNAK 71

Query: 732  TTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDIPPPRMQFDDKTRVEKAKRRSVVK 911
              KV     QKKD+      EKKG DRPPEKDRKKD+P PRMQFDDK+RVEKAKRR+VV+
Sbjct: 72   PAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDVPHPRMQFDDKSRVEKAKRRAVVR 131

Query: 912  QTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCI 1091
              E RNRVELFRHLPQYE GT LP+LESKFF LDPMHPAVYKVGLQYL GDV GGNARCI
Sbjct: 132  PIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGGNARCI 191

Query: 1092 AMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKL 1271
            AMLQAF+EAI DYSTPPEK LVRDLTA++SSYVSF+ ECRPLSISMGNAIRFLK+RIAKL
Sbjct: 192  AMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKL 251

Query: 1272 PLNLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILV 1451
            PL+LSE EAKA LQSDI+RFINEKIVLADKVIV HAVTKIRDGDVLLT+G+SS VEMIL+
Sbjct: 252  PLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILL 311

Query: 1452 YAHDIGKQFRVVVVDSRP 1505
            YAH++GKQFRVVVVDSRP
Sbjct: 312  YAHELGKQFRVVVVDSRP 329



 Score =  228 bits (582), Expect = 4e-57
 Identities = 109/128 (85%), Positives = 119/128 (92%)
 Frame = +2

Query: 1637 VFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDP 1816
            VFLGASSVL NGTVYSRVG+ACVSMVA AFRVPVL+CCEAYKF+ERVQLDSICSNELGDP
Sbjct: 365  VFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDP 424

Query: 1817 DTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVRE 1996
            D ISKVPGRE++N+L++W+ SE LQLLNL YD TPSDYVSMIITDYGMVPPTSVPVIVRE
Sbjct: 425  DAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVRE 484

Query: 1997 YMREPLWM 2020
            Y RE LW+
Sbjct: 485  YRREHLWI 492


>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score =  429 bits (1104), Expect = e-117
 Identities = 227/318 (71%), Positives = 252/318 (79%), Gaps = 3/318 (0%)
 Frame = +3

Query: 561  VETKNDRPTSSKPLKEKTSXXXXXXXXXXXXXXXXXXXXXGGRHTGAIASGGPA---HAK 731
            +E +N++P SS+ LKEKTS                       +    IA+ G A   +AK
Sbjct: 333  IEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSK--APIAASGVATSVNAK 390

Query: 732  TTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDIPPPRMQFDDKTRVEKAKRRSVVK 911
              KV     QKKD       EKKG DRPPEKDRKKD+P PRMQFDDK+RVEKAKRR+VV+
Sbjct: 391  PAKVSKLSSQKKDXASVTASEKKGVDRPPEKDRKKDVPHPRMQFDDKSRVEKAKRRAVVR 450

Query: 912  QTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCI 1091
              E RNRVELFRHLPQYE GT LP+LESKFF LDPMHPAVYKVGLQYL GDV GGNARCI
Sbjct: 451  PIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGGNARCI 510

Query: 1092 AMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKL 1271
            AMLQAF+EAI DYSTPPEK LVRDLTA++SSYVSF+ ECRPLSISMGNAIRFLK+RIAKL
Sbjct: 511  AMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKL 570

Query: 1272 PLNLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILV 1451
            PL+LSE EAKA LQSDI+RFINEKIVLADKVIV HAVTKIRDGDVLLT+G+SS VEMIL+
Sbjct: 571  PLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILL 630

Query: 1452 YAHDIGKQFRVVVVDSRP 1505
            YAH++GKQFRVVVVDSRP
Sbjct: 631  YAHELGKQFRVVVVDSRP 648



 Score =  194 bits (493), Expect = 9e-47
 Identities = 92/109 (84%), Positives = 102/109 (93%)
 Frame = +2

Query: 1637 VFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDP 1816
            VFLGASSVL NGTVYSRVG+ACVSMVA AFRVPVL+CCEAYKF+ERVQLDSICSNELGDP
Sbjct: 684  VFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDP 743

Query: 1817 DTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMV 1963
            D ISKVPGRE++N+L++W+ SE LQLLNL YD TPSDYVSMIITDYGM+
Sbjct: 744  DAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGML 792



 Score = 92.4 bits (228), Expect = 5e-16
 Identities = 61/122 (50%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
 Frame = +1

Query: 7   LSHLKTLTHTQQFP-QMDTRRVSRTVIDPKIRQVGFITP-------TSGPP----PPLDR 150
           +S LKTLTH  + P  MD RR +R VIDPK+RQVGF  P        SGPP    PP+  
Sbjct: 50  ISTLKTLTHIHETPLHMDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV-- 107

Query: 151 TQSGPASNSLPPVTIPPRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSQHFLG 327
             + P  NSL PV IPP RHASDNL S  P   P  PLR+    + +PVGSY  S+ F G
Sbjct: 108 ADNSPTGNSLSPVMIPPPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHG 163

Query: 328 AS 333
            S
Sbjct: 164 TS 165


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