BLASTX nr result
ID: Coptis25_contig00002752
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002752 (532 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519809.1| nuclear pore complex protein nup93, putative... 292 2e-77 ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620... 286 1e-75 ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2... 281 6e-74 ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|2... 279 2e-73 ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620... 276 1e-72 >ref|XP_002519809.1| nuclear pore complex protein nup93, putative [Ricinus communis] gi|223541048|gb|EEF42605.1| nuclear pore complex protein nup93, putative [Ricinus communis] Length = 710 Score = 292 bits (748), Expect = 2e-77 Identities = 143/176 (81%), Positives = 154/176 (87%) Frame = -3 Query: 530 RKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGNLQRVRAFLRIRLRDYGVLDF 351 RKMSL+IGARRHLEWGHEK+I+DTIQSHP QAALGGAVGNLQRVRAFLRIRLRDYGVLDF Sbjct: 243 RKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDF 302 Query: 350 DASDARRQPPLDTTWQQIYFCLRTGYYDEARNVALSSRVSQQFAPQLSEWITSGGMVXXX 171 DA DARRQPP+DTTWQQIYFCLRTGYYDEARN+ALSSR SQQFAP L+EWI +GG+V Sbjct: 303 DAGDARRQPPVDTTWQQIYFCLRTGYYDEARNIALSSRASQQFAPLLTEWINTGGIVPPE 362 Query: 170 XXXXXXXXXEKMLRMSDRVGRSGYDKKKLLLYTIISGSRRQIDRLLGDIPTLFNTI 3 EKMLRM DRVGR YDKKKLLLY ++SGSRRQIDRLL D+PTLFNTI Sbjct: 363 IAAAASEECEKMLRMVDRVGRGAYDKKKLLLYALVSGSRRQIDRLLRDLPTLFNTI 418 >ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus] gi|449494745|ref|XP_004159635.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus] Length = 863 Score = 286 bits (733), Expect = 1e-75 Identities = 139/176 (78%), Positives = 153/176 (86%) Frame = -3 Query: 530 RKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGNLQRVRAFLRIRLRDYGVLDF 351 +KMSLI+GARRHLEWGHEK+I+DTIQSHP QAALGG VGNLQR+RAFLRIRLRDYGVLDF Sbjct: 274 KKMSLILGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRIRAFLRIRLRDYGVLDF 333 Query: 350 DASDARRQPPLDTTWQQIYFCLRTGYYDEARNVALSSRVSQQFAPQLSEWITSGGMVXXX 171 DA+DARRQPP+DTTWQQIYFCLRTGYYDEARN+ALSSR S QFAP L+EWI +GGMV Sbjct: 334 DANDARRQPPVDTTWQQIYFCLRTGYYDEARNIALSSRASNQFAPLLTEWINTGGMVPVD 393 Query: 170 XXXXXXXXXEKMLRMSDRVGRSGYDKKKLLLYTIISGSRRQIDRLLGDIPTLFNTI 3 EK+LRM DR+GR+ YDKKKLLLY IISGSRRQIDRLL D+P LFNTI Sbjct: 394 IASVASEECEKLLRMGDRMGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPMLFNTI 449 >ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1| predicted protein [Populus trichocarpa] Length = 863 Score = 281 bits (718), Expect = 6e-74 Identities = 138/176 (78%), Positives = 147/176 (83%) Frame = -3 Query: 530 RKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGNLQRVRAFLRIRLRDYGVLDF 351 RKMSL+IGARRHLEWGHEK+I+DTIQ+HP QAALGGAVGNLQRV AFLRIRLRDYGVLDF Sbjct: 274 RKMSLVIGARRHLEWGHEKYIMDTIQNHPAQAALGGAVGNLQRVHAFLRIRLRDYGVLDF 333 Query: 350 DASDARRQPPLDTTWQQIYFCLRTGYYDEARNVALSSRVSQQFAPQLSEWITSGGMVXXX 171 DA D RQPP+DTTWQQIY CLRTGYY+EAR VALSSR S QFAP L EWI SGGMV Sbjct: 334 DAGDTHRQPPVDTTWQQIYICLRTGYYEEARTVALSSRASHQFAPMLMEWINSGGMVPAD 393 Query: 170 XXXXXXXXXEKMLRMSDRVGRSGYDKKKLLLYTIISGSRRQIDRLLGDIPTLFNTI 3 EKMLRM DRVGR+ YDKKKLLLY I+SGSRRQID LL D+PTLFNTI Sbjct: 394 IAAAASEECEKMLRMGDRVGRAAYDKKKLLLYAIVSGSRRQIDHLLRDLPTLFNTI 449 >ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|222858408|gb|EEE95955.1| predicted protein [Populus trichocarpa] Length = 863 Score = 279 bits (713), Expect = 2e-73 Identities = 137/176 (77%), Positives = 147/176 (83%) Frame = -3 Query: 530 RKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGNLQRVRAFLRIRLRDYGVLDF 351 RKMSL+IGARRHLEWGHEK+I+DTIQ+HP QAALGGAVGNLQRVRAFLRIRLRDYGVLDF Sbjct: 274 RKMSLVIGARRHLEWGHEKYIMDTIQNHPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDF 333 Query: 350 DASDARRQPPLDTTWQQIYFCLRTGYYDEARNVALSSRVSQQFAPQLSEWITSGGMVXXX 171 DA D RQPP+DTTWQQIYFCLRTGYY+EAR VALSSR S QFAP L EWI SGGMV Sbjct: 334 DAGDTHRQPPVDTTWQQIYFCLRTGYYEEARTVALSSRASLQFAPMLMEWINSGGMVPVD 393 Query: 170 XXXXXXXXXEKMLRMSDRVGRSGYDKKKLLLYTIISGSRRQIDRLLGDIPTLFNTI 3 EKMLRM DRVGR+ YDKKKLLLY ++SG R QID LL D+PTLFNTI Sbjct: 394 IAAAASEECEKMLRMGDRVGRAAYDKKKLLLYAVVSGCRWQIDHLLRDLPTLFNTI 449 >ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620 [Vitis vinifera] gi|297739625|emb|CBI29807.3| unnamed protein product [Vitis vinifera] Length = 863 Score = 276 bits (706), Expect = 1e-72 Identities = 135/176 (76%), Positives = 149/176 (84%) Frame = -3 Query: 530 RKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGNLQRVRAFLRIRLRDYGVLDF 351 +KMSL+IGARRHLEWGHEK+++DTIQSHP QAALGG VGNLQR+ AFLRIRLRDYGVLDF Sbjct: 274 KKMSLVIGARRHLEWGHEKYMIDTIQSHPAQAALGGVVGNLQRIHAFLRIRLRDYGVLDF 333 Query: 350 DASDARRQPPLDTTWQQIYFCLRTGYYDEARNVALSSRVSQQFAPQLSEWITSGGMVXXX 171 DA DARRQPP+DTTWQQIYFCLRTGYY+EA VA SSRVS QFA QL+EWIT+ GMV Sbjct: 334 DAGDARRQPPVDTTWQQIYFCLRTGYYEEAIEVARSSRVSNQFASQLTEWITTRGMVSAE 393 Query: 170 XXXXXXXXXEKMLRMSDRVGRSGYDKKKLLLYTIISGSRRQIDRLLGDIPTLFNTI 3 +KMLRM DRVGR+ YDKK+LLLY IISGSRR IDRLL D+PTLFNTI Sbjct: 394 IAAVASEECDKMLRMGDRVGRAAYDKKRLLLYAIISGSRRHIDRLLRDLPTLFNTI 449