BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002749
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like...   125   5e-27
ref|XP_002882511.1| structural constituent of ribosome [Arabidop...   122   4e-26
ref|XP_004154637.1| PREDICTED: 60S ribosomal protein L13a-4-like...   121   5e-26
ref|XP_004138959.1| PREDICTED: 60S ribosomal protein L13a-4-like...   121   5e-26
ref|XP_004133995.1| PREDICTED: 60S ribosomal protein L13a-2-like...   121   5e-26

>ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 1 [Cucumis
           sativus]
          Length = 241

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/68 (89%), Positives = 65/68 (95%)
 Frame = -2

Query: 206 QERKVKMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVR 27
           + R  KMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVR
Sbjct: 28  KNRNKKMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVR 87

Query: 26  QKMKYLRF 3
           QKMKY+RF
Sbjct: 88  QKMKYMRF 95


>ref|XP_002882511.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297328351|gb|EFH58770.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 207

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = -2

Query: 188 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 9
           MVSGSGICAKRVVVDARHHMLGRLSSI+AKELLNGQ+VVVVRCEEICLSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIVAKELLNGQKVVVVRCEEICLSGGLVRQKMKYM 60

Query: 8   RF 3
           RF
Sbjct: 61  RF 62


>ref|XP_004154637.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 2 [Cucumis
           sativus] gi|449476094|ref|XP_004154638.1| PREDICTED: 60S
           ribosomal protein L13a-4-like isoform 3 [Cucumis
           sativus]
          Length = 208

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = -2

Query: 188 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 9
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 8   RF 3
           RF
Sbjct: 61  RF 62


>ref|XP_004138959.1| PREDICTED: 60S ribosomal protein L13a-4-like [Cucumis sativus]
           gi|449442541|ref|XP_004139040.1| PREDICTED: 60S
           ribosomal protein L13a-4-like [Cucumis sativus]
          Length = 206

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = -2

Query: 188 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 9
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 8   RF 3
           RF
Sbjct: 61  RF 62


>ref|XP_004133995.1| PREDICTED: 60S ribosomal protein L13a-2-like [Cucumis sativus]
           gi|449525004|ref|XP_004169511.1| PREDICTED: 60S
           ribosomal protein L13a-2-like [Cucumis sativus]
          Length = 206

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = -2

Query: 188 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 9
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 8   RF 3
           RF
Sbjct: 61  RF 62