BLASTX nr result

ID: Coptis25_contig00002741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002741
         (1682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282060.1| PREDICTED: methionine aminopeptidase 1D, chl...   196   e-139
ref|XP_002306464.1| predicted protein [Populus trichocarpa] gi|2...   193   e-136
ref|XP_003517292.1| PREDICTED: methionine aminopeptidase 1D, chl...   196   e-130
ref|XP_004148033.1| PREDICTED: methionine aminopeptidase 1D, chl...   194   e-129
ref|XP_002866973.1| hypothetical protein ARALYDRAFT_912645 [Arab...   179   e-128

>ref|XP_002282060.1| PREDICTED: methionine aminopeptidase 1D,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|296082435|emb|CBI21440.3| unnamed protein product
           [Vitis vinifera]
          Length = 350

 Score =  196 bits (497), Expect(4) = e-139
 Identities = 99/152 (65%), Positives = 109/152 (71%)
 Frame = -3

Query: 759 VTKECLYKAIAICAPGVEFKKIGKTIHDHADKYRFGVVRQFVGHGVGRVFHSDPVVLHYR 580
           VTKECL KAI+ICAPGVEFKKIGKTIHDHADK+R+GVVR FVGHGVGRVFH+DPV+LHYR
Sbjct: 228 VTKECLDKAISICAPGVEFKKIGKTIHDHADKHRYGVVRMFVGHGVGRVFHADPVILHYR 287

Query: 579 NNDPGRMVLGQTFTIEPMLTMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 400
           NND G MVL QTFTIEPMLT+G                                     D
Sbjct: 288 NNDGGHMVLNQTFTIEPMLTIG-----------------------------SINPIMWDD 318

Query: 399 NWTVVTSDGSMSAQFEHTLLITQDGAEILTQC 304
           NWTVVT DGS+SAQFEHT+LIT++GAEILTQC
Sbjct: 319 NWTVVTEDGSLSAQFEHTILITENGAEILTQC 350



 Score =  184 bits (468), Expect(4) = e-139
 Identities = 84/91 (92%), Positives = 88/91 (96%)
 Frame = -1

Query: 1115 GIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDIVNI 936
            GIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR LEDGDI+NI
Sbjct: 137  GIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINI 196

Query: 935  DVTVFLNGYHGDTSTTFFCGNVDDRVRKLVE 843
            DVTV+LNGYHGDTS TFFCG+VDD+ RKLVE
Sbjct: 197  DVTVYLNGYHGDTSATFFCGDVDDKARKLVE 227



 Score =  137 bits (345), Expect(4) = e-139
 Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -2

Query: 1471 GKNCASKNLSRTFSGLTDLLFSKRNNDS-QKSGRKRLSPGKVSPRRPVPDHIPRPSYVTS 1295
            G    S  LSRTFSGLT+LLF++RN +    S RKRL PGK+SP RPVP HI RPSYVTS
Sbjct: 36   GNKHVSMQLSRTFSGLTNLLFNRRNLEGLPNSKRKRLRPGKLSPCRPVPGHILRPSYVTS 95

Query: 1294 GQSPGIASGPEVHDEKGKECMRAAGRLAAQVLEYAGTLVK 1175
             + PGI SGPEVHDEKG ECMR +GRLAAQVLEYAGTLVK
Sbjct: 96   KKPPGIVSGPEVHDEKGIECMRNSGRLAAQVLEYAGTLVK 135



 Score = 47.8 bits (112), Expect(4) = e-139
 Identities = 25/41 (60%), Positives = 29/41 (70%)
 Frame = -1

Query: 1670 MVCTSSLQPRLLSSFVGDLLIHSTAQQPLHHIFRYTQGGKN 1548
            MV  SSLQPRLLSSFVGD  + S  Q+PLH +FR   G K+
Sbjct: 1    MVGASSLQPRLLSSFVGDRFVQS--QRPLHQLFRCNPGNKH 39


>ref|XP_002306464.1| predicted protein [Populus trichocarpa] gi|222855913|gb|EEE93460.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  193 bits (490), Expect(4) = e-136
 Identities = 96/152 (63%), Positives = 109/152 (71%)
 Frame = -3

Query: 759 VTKECLYKAIAICAPGVEFKKIGKTIHDHADKYRFGVVRQFVGHGVGRVFHSDPVVLHYR 580
           VT+ECLY+AI+ICAPGVE+KKIGKTIHDHAD+Y +GVVR FVGHGVGRVFH+DPVV H+R
Sbjct: 228 VTEECLYRAISICAPGVEYKKIGKTIHDHADRYSYGVVRHFVGHGVGRVFHADPVVQHFR 287

Query: 579 NNDPGRMVLGQTFTIEPMLTMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 400
           NND GRM+L QTFTIEPMLT+G                                     D
Sbjct: 288 NNDGGRMMLNQTFTIEPMLTIG-----------------------------SVNPVMWDD 318

Query: 399 NWTVVTSDGSMSAQFEHTLLITQDGAEILTQC 304
           NWTVVT DGS+SAQFEHT+LIT+DGAEILTQC
Sbjct: 319 NWTVVTEDGSLSAQFEHTILITKDGAEILTQC 350



 Score =  182 bits (462), Expect(4) = e-136
 Identities = 82/91 (90%), Positives = 88/91 (96%)
 Frame = -1

Query: 1115 GIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDIVNI 936
            GIKTD+ID+AVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDI+NI
Sbjct: 137  GIKTDDIDQAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDIINI 196

Query: 935  DVTVFLNGYHGDTSTTFFCGNVDDRVRKLVE 843
            DVTV+LNGYHGDTS TFFCG+VDD  RKLV+
Sbjct: 197  DVTVYLNGYHGDTSATFFCGDVDDEARKLVQ 227



 Score =  135 bits (339), Expect(4) = e-136
 Identities = 68/100 (68%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -2

Query: 1471 GKNCASKNLSRTFSGLTDLLFSKRNNDSQKSG-RKRLSPGKVSPRRPVPDHIPRPSYVTS 1295
            G    S  LSRT SGLT+LLF++RN D   +  ++RL PGK+SPRRPVPDHIPRP YV S
Sbjct: 36   GNKHVSMQLSRTLSGLTNLLFNRRNLDEVPNAEQQRLRPGKLSPRRPVPDHIPRPPYVNS 95

Query: 1294 GQSPGIASGPEVHDEKGKECMRAAGRLAAQVLEYAGTLVK 1175
             Q PGIASG EVHDE G ECMR++G+LAAQVL+YAGTLVK
Sbjct: 96   RQPPGIASGAEVHDENGIECMRSSGKLAAQVLQYAGTLVK 135



 Score = 45.4 bits (106), Expect(4) = e-136
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = -1

Query: 1670 MVCTSSLQPRLLSSFVGDLLIHSTAQQPLHHIFRYTQGGKN 1548
            MV TSSLQPRLLSSFVGD L+ S  +QP+  +F Y  G K+
Sbjct: 1    MVGTSSLQPRLLSSFVGDRLLLS--KQPVSRLFLYKPGNKH 39


>ref|XP_003517292.1| PREDICTED: methionine aminopeptidase 1D,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 356

 Score =  196 bits (498), Expect(4) = e-130
 Identities = 99/152 (65%), Positives = 109/152 (71%)
 Frame = -3

Query: 759 VTKECLYKAIAICAPGVEFKKIGKTIHDHADKYRFGVVRQFVGHGVGRVFHSDPVVLHYR 580
           VTKECL KAI+ICAPGVEFKKIGKTIHDHADKYR+GVVRQFVGHGVG VFH+DPV+LHYR
Sbjct: 234 VTKECLDKAISICAPGVEFKKIGKTIHDHADKYRYGVVRQFVGHGVGSVFHADPVILHYR 293

Query: 579 NNDPGRMVLGQTFTIEPMLTMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 400
           NN+ GRMVL QTFTIEPMLT+G                                     D
Sbjct: 294 NNESGRMVLNQTFTIEPMLTIG-----------------------------SINPVMWND 324

Query: 399 NWTVVTSDGSMSAQFEHTLLITQDGAEILTQC 304
           +WTVVT DGS+SAQFEHT+LIT DGAEI+TQC
Sbjct: 325 DWTVVTEDGSLSAQFEHTILITPDGAEIMTQC 356



 Score =  176 bits (447), Expect(4) = e-130
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = -1

Query: 1115 GIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDIVNI 936
            GI TDEID+AVHQMIIDNGAYPSPLGYG FPKSVCTSVNECICHGIPDSRALEDGDI+NI
Sbjct: 143  GITTDEIDQAVHQMIIDNGAYPSPLGYGSFPKSVCTSVNECICHGIPDSRALEDGDIINI 202

Query: 935  DVTVFLNGYHGDTSTTFFCGNVDDRVRKLVE 843
            DVTV+LNGYHGDTS TF+CG+VDD  +KLV+
Sbjct: 203  DVTVYLNGYHGDTSATFYCGDVDDEAKKLVQ 233



 Score =  129 bits (324), Expect(4) = e-130
 Identities = 69/100 (69%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -2

Query: 1471 GKNCASKNLSRTFSGLTDLLFSKRNNDS-QKSGRKRLSPGKVSPRRPVPDHIPRPSYVTS 1295
            G    S  LSRT SGLT+L F++RN D    S RKRL PGKVSPRR VP +IPRP YV S
Sbjct: 42   GTKHVSMQLSRTLSGLTNLFFNRRNLDELPNSKRKRLRPGKVSPRRQVPKNIPRPPYVNS 101

Query: 1294 GQSPGIASGPEVHDEKGKECMRAAGRLAAQVLEYAGTLVK 1175
               PGIASG EVHD+KG ECMRA+GRLAAQVL+YAGTLVK
Sbjct: 102  MIPPGIASGAEVHDKKGIECMRASGRLAAQVLQYAGTLVK 141



 Score = 34.7 bits (78), Expect(4) = e-130
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = -1

Query: 1652 LQPRLLSSFVGDLLIH--STAQQPLHHIFRYTQGGKN 1548
            LQ RL SSF+GD L+   ++  QPL  +FRY  G K+
Sbjct: 9    LQMRLKSSFIGDRLLRCSTSRHQPLPQLFRYNPGTKH 45


>ref|XP_004148033.1| PREDICTED: methionine aminopeptidase 1D,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449502729|ref|XP_004161726.1| PREDICTED: methionine
           aminopeptidase 1D, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 352

 Score =  194 bits (494), Expect(3) = e-129
 Identities = 99/152 (65%), Positives = 109/152 (71%)
 Frame = -3

Query: 759 VTKECLYKAIAICAPGVEFKKIGKTIHDHADKYRFGVVRQFVGHGVGRVFHSDPVVLHYR 580
           VTKECL KAI+ICAPGVEFKKIGK IHDHADK+R+GVV+QFVGHGVGRVFH+DPVVLH+R
Sbjct: 230 VTKECLDKAISICAPGVEFKKIGKIIHDHADKHRYGVVQQFVGHGVGRVFHADPVVLHFR 289

Query: 579 NNDPGRMVLGQTFTIEPMLTMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 400
           NND GRMVL QTFTIEPMLT+G                                     D
Sbjct: 290 NNDAGRMVLNQTFTIEPMLTIG-----------------------------SINPVMWND 320

Query: 399 NWTVVTSDGSMSAQFEHTLLITQDGAEILTQC 304
           NWTVVT DGS+SAQFEHT+LIT DGAEILT+C
Sbjct: 321 NWTVVTEDGSLSAQFEHTILITNDGAEILTRC 352



 Score =  181 bits (460), Expect(3) = e-129
 Identities = 82/91 (90%), Positives = 87/91 (95%)
 Frame = -1

Query: 1115 GIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDIVNI 936
            GI TD+ID+AVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDI+NI
Sbjct: 139  GIMTDDIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDIINI 198

Query: 935  DVTVFLNGYHGDTSTTFFCGNVDDRVRKLVE 843
            DVTV+LNGYHGDTS TFFCGNVDD  RKLV+
Sbjct: 199  DVTVYLNGYHGDTSATFFCGNVDDEARKLVQ 229



 Score =  137 bits (344), Expect(3) = e-129
 Identities = 71/100 (71%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
 Frame = -2

Query: 1471 GKNCASKNLSRTFSGLTDLLFSKRNNDS-QKSGRKRLSPGKVSPRRPVPDHIPRPSYVTS 1295
            G    S  LSR  SGLT+L FS+RN D  Q + RKRL PGK+SPR PVPD+I RP YV S
Sbjct: 38   GSKHVSMQLSRALSGLTNLFFSRRNLDEMQNTKRKRLRPGKISPRLPVPDNITRPPYVKS 97

Query: 1294 GQSPGIASGPEVHDEKGKECMRAAGRLAAQVLEYAGTLVK 1175
             + PGIASGPEVHDEKG ECMRA+GRLAAQVLEYAGTLVK
Sbjct: 98   KRPPGIASGPEVHDEKGIECMRASGRLAAQVLEYAGTLVK 137


>ref|XP_002866973.1| hypothetical protein ARALYDRAFT_912645 [Arabidopsis lyrata subsp.
           lyrata] gi|297312809|gb|EFH43232.1| hypothetical protein
           ARALYDRAFT_912645 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  179 bits (454), Expect(4) = e-128
 Identities = 93/152 (61%), Positives = 104/152 (68%)
 Frame = -3

Query: 759 VTKECLYKAIAICAPGVEFKKIGKTIHDHADKYRFGVVRQFVGHGVGRVFHSDPVVLHYR 580
           VTKE L KAI+IC PGVE+KKIGK IHD ADK+R+GVVRQFVGHGVG VFH+DPVVLH+R
Sbjct: 228 VTKESLDKAISICGPGVEYKKIGKIIHDLADKHRYGVVRQFVGHGVGSVFHADPVVLHFR 287

Query: 579 NNDPGRMVLGQTFTIEPMLTMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 400
           NN+ GRMVL QTFTIEPMLT+G                                     D
Sbjct: 288 NNEAGRMVLNQTFTIEPMLTIG-----------------------------SRNPVMWDD 318

Query: 399 NWTVVTSDGSMSAQFEHTLLITQDGAEILTQC 304
           NWTVVT D S+SAQFEHT+LIT+DGAEILT C
Sbjct: 319 NWTVVTEDASLSAQFEHTILITKDGAEILTNC 350



 Score =  177 bits (450), Expect(4) = e-128
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = -1

Query: 1115 GIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDIVNI 936
            G+ TDEIDEAVH MII+NGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR LEDGDI+NI
Sbjct: 137  GVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINI 196

Query: 935  DVTVFLNGYHGDTSTTFFCGNVDDRVRKLVE 843
            DVTV+LNGYHGDTS TFFCGNVD++ +KLVE
Sbjct: 197  DVTVYLNGYHGDTSATFFCGNVDEKAKKLVE 227



 Score =  134 bits (337), Expect(4) = e-128
 Identities = 68/100 (68%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
 Frame = -2

Query: 1471 GKNCASKNLSRTFSGLTDLLFSKRNNDSQKSG-RKRLSPGKVSPRRPVPDHIPRPSYVTS 1295
            G+   S  LSRTFSGLT+LLF++RN D    G RKRL PG VSPRRPVPDHI +P YV S
Sbjct: 36   GRRHVSMQLSRTFSGLTNLLFNRRNEDEIIDGKRKRLRPGNVSPRRPVPDHITKPPYVDS 95

Query: 1294 GQSPGIASGPEVHDEKGKECMRAAGRLAAQVLEYAGTLVK 1175
             ++PGI+SG E+HD+KG ECMRA+GRLAA+V EYAGTLVK
Sbjct: 96   FKAPGISSGLEIHDKKGIECMRASGRLAAKVREYAGTLVK 135



 Score = 39.7 bits (91), Expect(4) = e-128
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -1

Query: 1670 MVCTSSLQPRLLSSFVGDLLIHSTAQQPLHHIFRYTQGGKN 1548
            M    SLQPRL+SSF+G+  I ST  QPL H+FR+  G ++
Sbjct: 1    MAGVQSLQPRLISSFLGNHSIRST--QPLIHLFRFDLGRRH 39


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