BLASTX nr result

ID: Coptis25_contig00002728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002728
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31217.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing...   202   3e-50
emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]   202   3e-50
ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing...   195   5e-48
ref|XP_002439269.1| hypothetical protein SORBIDRAFT_09g003530 [S...   194   2e-47

>emb|CBI31217.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  202 bits (515), Expect = 3e-50
 Identities = 112/175 (64%), Positives = 125/175 (71%)
 Frame = +2

Query: 122 LTENVKYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRSIGRIT 301
           L  +VKYIAPHLR+ A NE  E+ QI R +RGLL+RLSE+NVESI  EMS+I+ S GR  
Sbjct: 23  LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGRRV 82

Query: 302 GAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXXCLVGIDFSAKLIASLAKSFEDEFMK 481
           G+QIIS EVL SCSGGPRGNEQY            CLVGIDFSAKL+ASLAKSFEDE++K
Sbjct: 83  GSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIK 142

Query: 482 EDXXXXXXXXXXXXXXXXXGVCSSDLIYDFLSILSKQLLEIDVSTILTILQCCGM 646
           ED                  V +SDLIYDFL I SKQLLEIDVSTILTILQCCGM
Sbjct: 143 EDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQCCGM 197


>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
           vinifera]
          Length = 700

 Score =  202 bits (515), Expect = 3e-50
 Identities = 112/175 (64%), Positives = 125/175 (71%)
 Frame = +2

Query: 122 LTENVKYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRSIGRIT 301
           L  +VKYIAPHLR+ A NE  E+ QI R +RGLL+RLSE+NVESI  EMS+I+ S GR  
Sbjct: 187 LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGRRV 246

Query: 302 GAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXXCLVGIDFSAKLIASLAKSFEDEFMK 481
           G+QIIS EVL SCSGGPRGNEQY            CLVGIDFSAKL+ASLAKSFEDE++K
Sbjct: 247 GSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIK 306

Query: 482 EDXXXXXXXXXXXXXXXXXGVCSSDLIYDFLSILSKQLLEIDVSTILTILQCCGM 646
           ED                  V +SDLIYDFL I SKQLLEIDVSTILTILQCCGM
Sbjct: 307 EDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQCCGM 361


>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
          Length = 700

 Score =  202 bits (515), Expect = 3e-50
 Identities = 112/175 (64%), Positives = 125/175 (71%)
 Frame = +2

Query: 122 LTENVKYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRSIGRIT 301
           L  +VKYIAPHLR+ A NE  E+ QI R +RGLL+RLSE+NVESI  EMS+I+ S GR  
Sbjct: 187 LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGRRV 246

Query: 302 GAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXXCLVGIDFSAKLIASLAKSFEDEFMK 481
           G+QIIS EVL SCSGGPRGNEQY            CLVGIDFSAKL+ASLAKSFEDE++K
Sbjct: 247 GSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIK 306

Query: 482 EDXXXXXXXXXXXXXXXXXGVCSSDLIYDFLSILSKQLLEIDVSTILTILQCCGM 646
           ED                  V +SDLIYDFL I SKQLLEIDVSTILTILQCCGM
Sbjct: 307 EDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQCCGM 361


>ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Glycine max]
          Length = 794

 Score =  195 bits (496), Expect = 5e-48
 Identities = 102/170 (60%), Positives = 119/170 (70%)
 Frame = +2

Query: 137 KYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRSIGRITGAQII 316
           KYIAPHLRA A NE EEHTQI R VRGLL+RLSE+NVESIT E+S I++S+ R   +QI+
Sbjct: 286 KYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVARSVASQIL 345

Query: 317 S*EVLPSCSGGPRGNEQYXXXXXXXXXXXXCLVGIDFSAKLIASLAKSFEDEFMKEDXXX 496
           + EVL SCS GPRGN+QY            CLVG+DFSAK +AS AK FEDE+ KED   
Sbjct: 346 TEEVLASCSSGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFVASFAKCFEDEYNKEDNLS 405

Query: 497 XXXXXXXXXXXXXXGVCSSDLIYDFLSILSKQLLEIDVSTILTILQCCGM 646
                         GVCSSDLIYDFL ++SK+L E DVS ILT+LQCCGM
Sbjct: 406 LRNLILLLSYLCIFGVCSSDLIYDFLVMVSKRLTEADVSIILTLLQCCGM 455


>ref|XP_002439269.1| hypothetical protein SORBIDRAFT_09g003530 [Sorghum bicolor]
           gi|241944554|gb|EES17699.1| hypothetical protein
           SORBIDRAFT_09g003530 [Sorghum bicolor]
          Length = 775

 Score =  194 bits (492), Expect = 2e-47
 Identities = 101/170 (59%), Positives = 122/170 (71%)
 Frame = +2

Query: 137 KYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRSIGRITGAQII 316
           KY+ P LR  + +ESEE TQ+ R VRGLL+RLSE+NVESIT+E+S+++RS+ R  G+QII
Sbjct: 262 KYVPPSLRNASNSESEEITQMRRRVRGLLNRLSESNVESITQEISTLFRSVPRSVGSQII 321

Query: 317 S*EVLPSCSGGPRGNEQYXXXXXXXXXXXXCLVGIDFSAKLIASLAKSFEDEFMKEDXXX 496
             EVL SCS GPRGNEQY            CLVGIDFSAK++AS+AKSFEDE+ KED   
Sbjct: 322 GDEVLASCSRGPRGNEQYAAVFAAFVAGMACLVGIDFSAKILASIAKSFEDEYSKEDGLS 381

Query: 497 XXXXXXXXXXXXXXGVCSSDLIYDFLSILSKQLLEIDVSTILTILQCCGM 646
                         GV SSDL+YD LSILSK+L E+DVST+LTILQCCGM
Sbjct: 382 LRNLTLLFCYLCIFGVISSDLVYDLLSILSKRLTELDVSTVLTILQCCGM 431


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