BLASTX nr result

ID: Coptis25_contig00002727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002727
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280630.1| PREDICTED: uncharacterized protein LOC100266...   418   e-114
ref|XP_002511031.1| conserved hypothetical protein [Ricinus comm...   407   e-111
gb|AET07429.1| Or protein [Ipomoea batatas]                           406   e-111
emb|CBI38558.3| unnamed protein product [Vitis vinifera]              405   e-111
gb|AEO17754.1| orange protein [Nicotiana tabacum]                     402   e-110

>ref|XP_002280630.1| PREDICTED: uncharacterized protein LOC100266582 [Vitis vinifera]
          Length = 312

 Score =  418 bits (1074), Expect = e-114
 Identities = 213/295 (72%), Positives = 234/295 (79%), Gaps = 2/295 (0%)
 Frame = +3

Query: 54  HNNSTYLNSRFLHVRPKKTNFIKCQSMEPDPSSFP--IDADSIEKNTAAGFCIIEGPETV 227
           H N  Y NSRFL    K     +  + EP+ SSF   +D+DS +KN+  GFCIIEGPETV
Sbjct: 19  HRNYRYSNSRFLQGNLKSNLKWRSMASEPEASSFASSVDSDSSDKNST-GFCIIEGPETV 77

Query: 228 QDFAQMQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAELGTLKEEQENEXXXXXXX 407
           QDFA+M+ QEIQDNIRSRRNK+FL M             SAELG LKEEQENE       
Sbjct: 78  QDFAKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKSAELGILKEEQENELPNFPSF 137

Query: 408 XXXXXXXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLGIGGTSYEDFIVNMHLPMQ 587
                  S+ANLK YYA+CFSLIAGII+FGGLLAPTLELKLG+GGTSYEDFI ++HLPMQ
Sbjct: 138 IPFLPPLSSANLKLYYATCFSLIAGIIIFGGLLAPTLELKLGLGGTSYEDFIRSVHLPMQ 197

Query: 588 LSEVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLACARCSSTGTLVL 767
           LS+VDPIVASFSGGAVGVISALMVVE+NNVKQQE+KRCKYCLGTGYLACARCSSTG LVL
Sbjct: 198 LSQVDPIVASFSGGAVGVISALMVVEINNVKQQENKRCKYCLGTGYLACARCSSTGALVL 257

Query: 768 TEPVATVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 932
            EPV+TVN G QPL PP+TERCSNCSGAGKVMCPTCLCTGM MASEHDPRIDPFD
Sbjct: 258 IEPVSTVNSGSQPLSPPKTERCSNCSGAGKVMCPTCLCTGMEMASEHDPRIDPFD 312


>ref|XP_002511031.1| conserved hypothetical protein [Ricinus communis]
           gi|223550146|gb|EEF51633.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  407 bits (1045), Expect = e-111
 Identities = 211/310 (68%), Positives = 238/310 (76%)
 Frame = +3

Query: 3   KMLSFSHNLTVLKFKLSHNNSTYLNSRFLHVRPKKTNFIKCQSMEPDPSSFPIDADSIEK 182
           + L+ S+ +  L   + HN   +   RF+ V  K  +  +  + E D SS    +   +K
Sbjct: 6   RALAVSYPVKPLCLHVLHNPH-HSTGRFIDVNRKLISKWRSMASELDASSPSSSSFDSDK 64

Query: 183 NTAAGFCIIEGPETVQDFAQMQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAELGT 362
           N AAGFCIIEGPETVQDFA+M+ QEIQDNIRSRRNK+FL M             +AELG 
Sbjct: 65  N-AAGFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGI 123

Query: 363 LKEEQENEXXXXXXXXXXXXXXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLGIGG 542
           L+EEQENE              SAANL+ YYA+CFSLIAGII+FGGLLAP LELKLG+GG
Sbjct: 124 LQEEQENELPNFPSFIPFLPPLSAANLRLYYATCFSLIAGIIIFGGLLAPALELKLGLGG 183

Query: 543 TSYEDFIVNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTG 722
           TSYEDFI N+HLPMQLS+VDPIVASFSGGAVGVISALMVVE+NNVKQQEHKRCKYCLGTG
Sbjct: 184 TSYEDFIRNVHLPMQLSQVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTG 243

Query: 723 YLACARCSSTGTLVLTEPVATVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMAMAS 902
           YLACARCSSTG LVL EPV+TV+ GDQPLP P+TERCSNCSGAGKVMCPTCLCTGMAMAS
Sbjct: 244 YLACARCSSTGALVLVEPVSTVSSGDQPLPVPKTERCSNCSGAGKVMCPTCLCTGMAMAS 303

Query: 903 EHDPRIDPFD 932
           EHDPRIDPFD
Sbjct: 304 EHDPRIDPFD 313


>gb|AET07429.1| Or protein [Ipomoea batatas]
          Length = 313

 Score =  406 bits (1044), Expect = e-111
 Identities = 212/313 (67%), Positives = 247/313 (78%), Gaps = 3/313 (0%)
 Frame = +3

Query: 3   KMLSFSHNLTVLKFKLSHNNSTYLNSRF-LHVRPKKTNFIKCQSMEPDPSSFP--IDADS 173
           ++LS S + T   F LS   S + +SR+ LH R K    ++  + + D SSF   +D ++
Sbjct: 6   RILSLSSSTT--PFHLS--TSPFHSSRYHLHGRLKSRVRLRPMAADADSSSFSSSVDTEA 61

Query: 174 IEKNTAAGFCIIEGPETVQDFAQMQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAE 353
            +KN AAGFCIIEGPETVQDFAQM+ +EIQDNIRSRRNK+FL M             +AE
Sbjct: 62  PDKN-AAGFCIIEGPETVQDFAQMELKEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNAE 120

Query: 354 LGTLKEEQENEXXXXXXXXXXXXXXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLG 533
           LG L E+QEN+              ++ANLKQYYA+CFSLIAG+++FGGLLAPTLELKLG
Sbjct: 121 LGNLNEKQENKLPNFPSFIPFLPPLTSANLKQYYATCFSLIAGVMLFGGLLAPTLELKLG 180

Query: 534 IGGTSYEDFIVNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCL 713
           +GGTSY DFI +MHLPMQLS+VDPIVASFSGGAVGVISALMVVE+NNVKQQEHKRCKYCL
Sbjct: 181 LGGTSYADFIRSMHLPMQLSDVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCL 240

Query: 714 GTGYLACARCSSTGTLVLTEPVATVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMA 893
           GTGYLACARCSSTG+LVL EPV+TVN GDQPL PP+TERC+NCSG+GKVMCPTCLCTGMA
Sbjct: 241 GTGYLACARCSSTGSLVLIEPVSTVNRGDQPLSPPKTERCTNCSGSGKVMCPTCLCTGMA 300

Query: 894 MASEHDPRIDPFD 932
           MASEHDPRIDPFD
Sbjct: 301 MASEHDPRIDPFD 313


>emb|CBI38558.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  405 bits (1042), Expect = e-111
 Identities = 204/268 (76%), Positives = 223/268 (83%), Gaps = 2/268 (0%)
 Frame = +3

Query: 135 EPDPSSFP--IDADSIEKNTAAGFCIIEGPETVQDFAQMQTQEIQDNIRSRRNKVFLLMX 308
           EP+ SSF   +D+DS +KN+  GFCIIEGPETVQDFA+M+ QEIQDNIRSRRNK+FL M 
Sbjct: 4   EPEASSFASSVDSDSSDKNST-GFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHME 62

Query: 309 XXXXXXXXXXXXSAELGTLKEEQENEXXXXXXXXXXXXXXSAANLKQYYASCFSLIAGII 488
                       SAELG LKEEQENE              S+ANLK YYA+CFSLIAGII
Sbjct: 63  EVRRLRIQQRIKSAELGILKEEQENELPNFPSFIPFLPPLSSANLKLYYATCFSLIAGII 122

Query: 489 VFGGLLAPTLELKLGIGGTSYEDFIVNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEV 668
           +FGGLLAPTLELKLG+GGTSYEDFI ++HLPMQLS+VDPIVASFSGGAVGVISALMVVE+
Sbjct: 123 IFGGLLAPTLELKLGLGGTSYEDFIRSVHLPMQLSQVDPIVASFSGGAVGVISALMVVEI 182

Query: 669 NNVKQQEHKRCKYCLGTGYLACARCSSTGTLVLTEPVATVNGGDQPLPPPRTERCSNCSG 848
           NNVKQQE+KRCKYCLGTGYLACARCSSTG LVL EPV+TVN G QPL PP+TERCSNCSG
Sbjct: 183 NNVKQQENKRCKYCLGTGYLACARCSSTGALVLIEPVSTVNSGSQPLSPPKTERCSNCSG 242

Query: 849 AGKVMCPTCLCTGMAMASEHDPRIDPFD 932
           AGKVMCPTCLCTGM MASEHDPRIDPFD
Sbjct: 243 AGKVMCPTCLCTGMEMASEHDPRIDPFD 270


>gb|AEO17754.1| orange protein [Nicotiana tabacum]
          Length = 311

 Score =  402 bits (1033), Expect = e-110
 Identities = 207/290 (71%), Positives = 230/290 (79%), Gaps = 5/290 (1%)
 Frame = +3

Query: 78  SRFLHVRPKK--TNFIKCQSM--EPDPSSFPIDADSIEKN-TAAGFCIIEGPETVQDFAQ 242
           SR+LH R  +  TN IK +SM  + D S+F    DS   + TA GFCIIEGPETV+DFA+
Sbjct: 22  SRYLHRRNLRNNTNNIKWRSMASDADASAFTTSFDSESSDKTAPGFCIIEGPETVEDFAK 81

Query: 243 MQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAELGTLKEEQENEXXXXXXXXXXXX 422
           M+ QEI+DNIRSRRNK+FL M             SAELG L +EQENE            
Sbjct: 82  MELQEIRDNIRSRRNKIFLHMEEVRRLRIQQRLKSAELGILTDEQENELPNFPSFIPFLP 141

Query: 423 XXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLGIGGTSYEDFIVNMHLPMQLSEVD 602
             ++ANLKQYYA+CFSLIAGI++FGGLLAPTLELKLG+GGTSY DFI +MHLPMQLS+VD
Sbjct: 142 PLTSANLKQYYATCFSLIAGIMLFGGLLAPTLELKLGLGGTSYADFIQSMHLPMQLSQVD 201

Query: 603 PIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLACARCSSTGTLVLTEPVA 782
           PIVASFSGGAVGVISALMVVE+NNVKQQEHKRCKYCLGTGYLACARCSSTG LVL EPV+
Sbjct: 202 PIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLACARCSSTGALVLIEPVS 261

Query: 783 TVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 932
           T NG D+PL PP TERC NCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD
Sbjct: 262 TFNGADKPLSPPNTERCPNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 311


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