BLASTX nr result

ID: Coptis25_contig00002725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002725
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518129.1| monoxygenase, putative [Ricinus communis] gi...   650   0.0  
ref|XP_002269379.2| PREDICTED: ubiquinone biosynthesis monooxyge...   645   0.0  
ref|XP_002299279.1| predicted protein [Populus trichocarpa] gi|2...   631   e-178
ref|XP_003595761.1| Ubiquinone biosynthesis monooxygenase COQ6 [...   627   e-177
ref|XP_003532249.1| PREDICTED: ubiquinone biosynthesis monooxyge...   625   e-177

>ref|XP_002518129.1| monoxygenase, putative [Ricinus communis] gi|223542725|gb|EEF44262.1|
            monoxygenase, putative [Ricinus communis]
          Length = 515

 Score =  650 bits (1677), Expect = 0.0
 Identities = 322/455 (70%), Positives = 376/455 (82%), Gaps = 21/455 (4%)
 Frame = -3

Query: 1337 YDIAIVGGGMVGMALACALSSSPLTKKLSVAIIDSNPALGKEVNVKKDDLPDPRVSTVTP 1158
            YDIAIVGGGMVGMA  C+L+++PLTK L+VAIIDSNPALG + ++ ++D PDPRVSTVTP
Sbjct: 60   YDIAIVGGGMVGMAFTCSLATTPLTKHLNVAIIDSNPALGSKFSINREDSPDPRVSTVTP 119

Query: 1157 ASISFFKDIGAWQYVMQHRHAYFDAMQVWDYTGLGYTRYTASDVDADILGCVVENKVLHS 978
            A+ISFFKDIGAWQYV QHRHAYFD MQVWDYTGLGYT+Y+A D + D LGCVVENKVLHS
Sbjct: 120  ATISFFKDIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYSARDANKDNLGCVVENKVLHS 179

Query: 977  SLLSCLQNTDFQKIIYPSRLTKMVVQPNTPTKGIDSSCS--------RMAKLELSDGQSL 822
            SLLS +++TDFQK IYPSRLT M +  ++ +  +DS+ S        R+AKLELS G SL
Sbjct: 180  SLLSRVEDTDFQKTIYPSRLTTMSLHQSSSSTEVDSTSSAEALYIKGRLAKLELSAGSSL 239

Query: 821  FAKLVVGADGGKSHVRELARIKTTGWNYSQNAIVCTVKHTVENHCAWQRFLPSGPIALLP 642
            +AKLVVGADGGKS VRELA  KTTGWNYSQNA++CTV+H+VEN CAWQRFLPSGPIALLP
Sbjct: 240  YAKLVVGADGGKSQVRELAGFKTTGWNYSQNAVICTVEHSVENRCAWQRFLPSGPIALLP 299

Query: 641  IGDEFSNIVWTMIPKEATERKSMSEDDFVKAVNHALHDGYGPNPQSNSLGYSGDYSW--- 471
            IGD+FSNIVWTM PKE+++ KSM+EDDFVKAVNHAL  GYGP+P+S+    +  ++W   
Sbjct: 300  IGDKFSNIVWTMNPKESSDCKSMNEDDFVKAVNHALDHGYGPHPKSSLFDGANMFTWLSG 359

Query: 470  ----------EVPPKVVELASERMVFPLSLKHANEYAVNRVVLIGDAAHTVHPLAGQGVN 321
                      EVPPKVV+LAS R+ FPLSL HA  Y   R+ LIGDAAHTVHPLAGQGVN
Sbjct: 360  NSVVSANESFEVPPKVVKLASARLAFPLSLMHAKNYTSKRIALIGDAAHTVHPLAGQGVN 419

Query: 320  LGFGDACALSKIIADGIAVGADLGELSLLKKYEAERKPANIMMTAILDGFQKAYSVDLGP 141
            LGFGDA ALS+IIA+GIAVG D+GE+SLLKKYEAERKPAN+ M AILDGFQKAYSVDLGP
Sbjct: 420  LGFGDAFALSRIIAEGIAVGTDIGEVSLLKKYEAERKPANVTMMAILDGFQKAYSVDLGP 479

Query: 140  FNVLRAAAFQAVQYISPLKRNIISYATGQQKWPLF 36
             N+LRAAAF    +ISPLKR+IISYA+G+Q+ PLF
Sbjct: 480  LNILRAAAFHGAHHISPLKRSIISYASGEQRLPLF 514


>ref|XP_002269379.2| PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like [Vitis
            vinifera]
          Length = 525

 Score =  645 bits (1663), Expect = 0.0
 Identities = 325/446 (72%), Positives = 368/446 (82%), Gaps = 18/446 (4%)
 Frame = -3

Query: 1337 YDIAIVGGGMVGMALACALSSSPLTKKLSVAIIDSNPALGKEVNVKKDDLPDPRVSTVTP 1158
            YDIAIVGGGMVGMALAC+L+S PLTK+L+VAIIDSNPAL  +  +KK+D PDPRVSTVTP
Sbjct: 79   YDIAIVGGGMVGMALACSLASMPLTKQLNVAIIDSNPALEGKTCIKKEDPPDPRVSTVTP 138

Query: 1157 ASISFFKDIGAWQYVMQHRHAYFDAMQVWDYTGLGYTRYTASDVDADILGCVVENKVLHS 978
            A+IS FKD+GAWQYV QHRHAYFD MQVWDYTGLGYTRY A DVD ++LGCVVENKVLHS
Sbjct: 139  ATISLFKDVGAWQYVQQHRHAYFDKMQVWDYTGLGYTRYNARDVDKEVLGCVVENKVLHS 198

Query: 977  SLLSCLQNTDFQKIIYPSRLTKMVVQPNTPTKGIDSSCS----RMAKLELSDGQSLFAKL 810
            SLLSC+QNTD +K IYPSRL  M +  N     +DS+ S     +AKLELSDG SL+AKL
Sbjct: 199  SLLSCIQNTDLKKRIYPSRLNSMTLHQNHLPTMMDSTSSSLHASLAKLELSDGNSLYAKL 258

Query: 809  VVGADGGKSHVRELARIKTTGWNYSQNAIVCTVKHTVENHCAWQRFLPSGPIALLPIGDE 630
            VVGADG KS VREL   KTTGW YSQNA++CTV+H  EN CAWQRFLPSGPIALLP+GD+
Sbjct: 259  VVGADGAKSRVRELTGFKTTGWYYSQNAVICTVEHKTENQCAWQRFLPSGPIALLPVGDK 318

Query: 629  FSNIVWTMIPKEATERKSMSEDDFVKAVNHALHDGYGPNPQSNSLGYSGD-YSW------ 471
            FSNIVWTM PKE++  + M+E+DFVKA+NHAL+ GYGP+PQSN LG +GD +SW      
Sbjct: 319  FSNIVWTMNPKESSACREMNENDFVKALNHALNYGYGPHPQSNLLGNNGDIFSWFRRDLT 378

Query: 470  -------EVPPKVVELASERMVFPLSLKHANEYAVNRVVLIGDAAHTVHPLAGQGVNLGF 312
                   EVPP VV+L S RMVFPLSL+HAN YA  RVVLIGDAAHTVHPLAGQGVNLGF
Sbjct: 379  VSANECFEVPPDVVKLVSGRMVFPLSLRHANNYASKRVVLIGDAAHTVHPLAGQGVNLGF 438

Query: 311  GDACALSKIIADGIAVGADLGELSLLKKYEAERKPANIMMTAILDGFQKAYSVDLGPFNV 132
            GDA ALS+II++GIAVG D+GE+ LLKK+EAERK  NIMM AILDGFQKAYSVD GP NV
Sbjct: 439  GDAFALSRIISEGIAVGTDIGEVHLLKKFEAERKRENIMMMAILDGFQKAYSVDFGPLNV 498

Query: 131  LRAAAFQAVQYISPLKRNIISYATGQ 54
            LRAAAF   QYISPLKR+IISYA+GQ
Sbjct: 499  LRAAAFHGAQYISPLKRSIISYASGQ 524


>ref|XP_002299279.1| predicted protein [Populus trichocarpa] gi|222846537|gb|EEE84084.1|
            predicted protein [Populus trichocarpa]
          Length = 447

 Score =  631 bits (1628), Expect = e-178
 Identities = 317/446 (71%), Positives = 371/446 (83%), Gaps = 21/446 (4%)
 Frame = -3

Query: 1310 MVGMALACALSSSPLTKKLSVAIIDSNPALGKEVNVKKDDLPDPRVSTVTPASISFFKDI 1131
            MVGMALAC+L+++PLTK LSVAIIDS+PAL  +  +K++D PDPRVSTVTPA+ISFFKD 
Sbjct: 1    MVGMALACSLATTPLTKHLSVAIIDSSPALANKPCIKREDPPDPRVSTVTPATISFFKDT 60

Query: 1130 GAWQYVMQHRHAYFDAMQVWDYTGLGYTRYTASDVDADILGCVVENKVLHSSLLSCLQNT 951
            GAWQYV QHRHAYFD MQVWDYTGLGYT+Y A DVD ++LGCVVENKVLHSSLLS +++T
Sbjct: 61   GAWQYVQQHRHAYFDKMQVWDYTGLGYTKYDARDVDKEVLGCVVENKVLHSSLLSRIEDT 120

Query: 950  DFQKIIYPSRLTKMVVQPNTPTKGIDSSCS--------RMAKLELSDGQSLFAKLVVGAD 795
            DFQK IY SRLT M + P++ +  +DS+ S        R+AKLELSDG SL+AKLVVG+D
Sbjct: 121  DFQKKIYHSRLTSMSLNPSSSSIVVDSTASTEASYARGRLAKLELSDGNSLYAKLVVGSD 180

Query: 794  GGKSHVRELARIKTTGWNYSQNAIVCTVKHTVENHCAWQRFLPSGPIALLPIGDEFSNIV 615
            GGKS VRELA  KTTGW YSQNA++CTV+H+VEN+ AWQRFLP+GPIALLPIGD+FSNIV
Sbjct: 181  GGKSQVRELAGFKTTGWKYSQNAVICTVEHSVENYSAWQRFLPAGPIALLPIGDKFSNIV 240

Query: 614  WTMIPKEATERKSMSEDDFVKAVNHALHDGYGPNPQSNSLGYSGDYSW------------ 471
            WTM P+E+++ KSM EDDFVKAVNHAL  GYGP+ +S+  G +G +SW            
Sbjct: 241  WTMNPEESSDFKSMKEDDFVKAVNHALDYGYGPHHKSSLPGSAGMFSWLGGNVTIFANES 300

Query: 470  -EVPPKVVELASERMVFPLSLKHANEYAVNRVVLIGDAAHTVHPLAGQGVNLGFGDACAL 294
             E+PPKVV+LASERM FPLSL HANEYA  RVVLIGDAAHTVHPLAGQGVNLGFGDA AL
Sbjct: 301  FEIPPKVVKLASERMAFPLSLMHANEYASKRVVLIGDAAHTVHPLAGQGVNLGFGDAFAL 360

Query: 293  SKIIADGIAVGADLGELSLLKKYEAERKPANIMMTAILDGFQKAYSVDLGPFNVLRAAAF 114
            S+IIA+GIAVG D+GE+SLLKKYEAERK AN+ M AILDGFQKAYSVD GP N+LRAAAF
Sbjct: 361  SRIIAEGIAVGMDIGEVSLLKKYEAERKLANMTMMAILDGFQKAYSVDFGPLNILRAAAF 420

Query: 113  QAVQYISPLKRNIISYATGQQKWPLF 36
                +ISPLKR+IISYA+G+Q+ PLF
Sbjct: 421  HGAHFISPLKRSIISYASGEQRLPLF 446


>ref|XP_003595761.1| Ubiquinone biosynthesis monooxygenase COQ6 [Medicago truncatula]
            gi|355484809|gb|AES66012.1| Ubiquinone biosynthesis
            monooxygenase COQ6 [Medicago truncatula]
          Length = 509

 Score =  627 bits (1616), Expect = e-177
 Identities = 306/456 (67%), Positives = 366/456 (80%), Gaps = 21/456 (4%)
 Frame = -3

Query: 1337 YDIAIVGGGMVGMALACALSSSPLTKKLSVAIIDSNPALGKEVNVKKDDLPDPRVSTVTP 1158
            YD+AIVGGGMVGMALAC L+  P+TK+LSVAIIDSNPAL   + +KK+D PDPRVSTVTP
Sbjct: 54   YDVAIVGGGMVGMALACFLACMPMTKQLSVAIIDSNPALSSGLCIKKEDPPDPRVSTVTP 113

Query: 1157 ASISFFKDIGAWQYVMQHRHAYFDAMQVWDYTGLGYTRYTASDVDADILGCVVENKVLHS 978
            ASISF ++ GAW+YV Q+RHAYF  MQVWDYTG GY RY A DV+ D LGCV ENKVLHS
Sbjct: 114  ASISFLQEAGAWKYVEQNRHAYFKKMQVWDYTGFGYARYDAGDVNKDFLGCVAENKVLHS 173

Query: 977  SLLSCLQNTDFQKIIYPSRLTKM--------VVQPNTPTKGIDSSCSRMAKLELSDGQSL 822
            SLLSC++++DF+   YPSRLT M        VV+ NTP+K    +    +KLELSDG S+
Sbjct: 174  SLLSCIKDSDFKTTFYPSRLTSMTLNTNSMSVVEENTPSKEPSPAQGHASKLELSDGSSI 233

Query: 821  FAKLVVGADGGKSHVRELARIKTTGWNYSQNAIVCTVKHTVENHCAWQRFLPSGPIALLP 642
            +AKLVVGADGGKS VRELA  KTTGWNYSQNAI+CTV+HT  NHCAWQRFLP+GPIALLP
Sbjct: 234  YAKLVVGADGGKSRVRELAGFKTTGWNYSQNAIICTVEHTSANHCAWQRFLPNGPIALLP 293

Query: 641  IGDEFSNIVWTMIPKEATERKSMSEDDFVKAVNHALHDGYGPNPQSNSLGYSGDYSW--- 471
            +G+ FSNIVWTM P E+ +RKS++E+ F+K VN AL  GYGP+P S+SLG    +SW   
Sbjct: 294  MGENFSNIVWTMSPTESNDRKSITEEMFLKDVNSALDYGYGPHPTSSSLGARDIFSWLKM 353

Query: 470  ----------EVPPKVVELASERMVFPLSLKHANEYAVNRVVLIGDAAHTVHPLAGQGVN 321
                      E+PPK + LASERMVFPLSL+HAN YA  RVVLIGDAAHT+HPLAGQGVN
Sbjct: 354  DGTLSANEPFEIPPKAIRLASERMVFPLSLRHANSYATKRVVLIGDAAHTIHPLAGQGVN 413

Query: 320  LGFGDACALSKIIADGIAVGADLGELSLLKKYEAERKPANIMMTAILDGFQKAYSVDLGP 141
            LGFGDA +LS++IA+GIA+G+D+GE++LLKKYE ERKPAN+ M AILDGFQKAYS+D GP
Sbjct: 414  LGFGDAYSLSRVIAEGIALGSDIGEVNLLKKYEQERKPANVTMMAILDGFQKAYSIDFGP 473

Query: 140  FNVLRAAAFQAVQYISPLKRNIISYATGQQKWPLFF 33
            FN LR AAF+   ++SPLKR+IISYA+G++K P+FF
Sbjct: 474  FNFLRGAAFRGANFVSPLKRSIISYASGERKLPIFF 509


>ref|XP_003532249.1| PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like [Glycine
            max]
          Length = 510

 Score =  625 bits (1612), Expect = e-177
 Identities = 308/456 (67%), Positives = 371/456 (81%), Gaps = 21/456 (4%)
 Frame = -3

Query: 1337 YDIAIVGGGMVGMALACALSSSPLTKKLSVAIIDSNPALGKEVNVKKDDLPDPRVSTVTP 1158
            YDIAIVGGGMVGMAL+C L+S+P+TK+LSVAIIDSNPALG  +++KK+D PDPRVSTVTP
Sbjct: 55   YDIAIVGGGMVGMALSCFLASNPMTKQLSVAIIDSNPALGSSLHIKKEDPPDPRVSTVTP 114

Query: 1157 ASISFFKDIGAWQYVMQHRHAYFDAMQVWDYTGLGYTRYTASDVDADILGCVVENKVLHS 978
            ASISF +D GAW+YV Q+R AYF+ MQVWDYTGLGY RY A DV+ D LGCV ENKVLH+
Sbjct: 115  ASISFLQDAGAWKYVEQNRRAYFNTMQVWDYTGLGYARYHARDVNKDFLGCVAENKVLHN 174

Query: 977  SLLSCLQNTDFQKIIYPSRLTKMVV--------QPNTPTKGIDSSCSRMAKLELSDGQSL 822
            +LLSC++++DF+  IYP RL+ M +        + N  +K   S+    A+L+LSDG S+
Sbjct: 175  ALLSCVKDSDFKTTIYPLRLSSMTLNTSSMSMAEENPTSKEPPSAQGHGAELQLSDGSSI 234

Query: 821  FAKLVVGADGGKSHVRELARIKTTGWNYSQNAIVCTVKHTVENHCAWQRFLPSGPIALLP 642
            +AKLVVGADGGKSHVRELA IKTTGWNYSQNAI+CTV+HT EN CAWQRFLP+GPIALLP
Sbjct: 235  YAKLVVGADGGKSHVRELAGIKTTGWNYSQNAIICTVEHTYENECAWQRFLPTGPIALLP 294

Query: 641  IGDEFSNIVWTMIPKEATERKSMSEDDFVKAVNHALHDGYGPNPQSNSLGYSGDYSW--- 471
            +GD+FSNIVWTM P E+  RKS++E++F+K VN+AL  G+GP+P S+  G    +SW   
Sbjct: 295  MGDKFSNIVWTMSPTESNNRKSITEEEFLKDVNYALDYGHGPHPTSSLSGTRDVFSWFKT 354

Query: 470  ----------EVPPKVVELASERMVFPLSLKHANEYAVNRVVLIGDAAHTVHPLAGQGVN 321
                      E+PPKV  LASERMVFPLSL+HAN YA+ RVVLIGDAAHTVHPLAGQGVN
Sbjct: 355  DATLSTNEFFEIPPKVTRLASERMVFPLSLRHANSYALKRVVLIGDAAHTVHPLAGQGVN 414

Query: 320  LGFGDACALSKIIADGIAVGADLGELSLLKKYEAERKPANIMMTAILDGFQKAYSVDLGP 141
            LGFGDA +LS+IIA+GIA+G D+GE+++LKKYEAERK ANIMM AILDG QKAYS+D GP
Sbjct: 415  LGFGDAFSLSRIIAEGIALGTDIGEVNMLKKYEAERKTANIMMMAILDGVQKAYSIDFGP 474

Query: 140  FNVLRAAAFQAVQYISPLKRNIISYATGQQKWPLFF 33
            FN+LRAAAF    YISPLKR+IISYA+G+ K P+FF
Sbjct: 475  FNILRAAAFHGANYISPLKRSIISYASGEHKLPIFF 510


Top