BLASTX nr result
ID: Coptis25_contig00002717
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002717
(1377 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera] 92 3e-16
emb|CBI26021.3| unnamed protein product [Vitis vinifera] 92 4e-16
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ... 74 9e-11
dbj|BAC83334.1| hypothetical protein [Oryza sativa Japonica Grou... 73 2e-10
ref|XP_003577168.1| PREDICTED: LOW QUALITY PROTEIN: putative F-b... 72 3e-10
>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
Length = 1789
Score = 92.0 bits (227), Expect = 3e-16
Identities = 84/327 (25%), Positives = 146/327 (44%), Gaps = 10/327 (3%)
Frame = +3
Query: 162 KDFAHHIDQWIEMAMDQRNQYPRIGLPH---FVIQREIYRDGNLYV-QFPS-LFSSQEIG 326
K+F HIDQWI A+ + + + L F ++R+ + +FP LFS
Sbjct: 1421 KEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPGGR 1480
Query: 327 SSVKCWSLKGCSFRSLYSKG-YSSLVDLRLKKVLIVGDTIVSILSSCPNXXXXXXXXXXX 503
++K L C +L S +SL+ + L++V I + +LS+C +
Sbjct: 1481 CTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLERLSLCVCNG 1540
Query: 504 XXXXKISGPSLKLKQLIILFCXXXXXXXXXXXXXXRFLYCGKWVKFEPINVPQLSNVIIR 683
S +L+LK L I C F Y G F NVP+L+ +
Sbjct: 1541 LVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKASLE 1600
Query: 684 TVLENS-CHALSYARGKLSSDVPHLESL-MLTLSPIEEKKIPKQFSLFSNLKKLVLLVRP 857
+++S + YA + D+P LE+L +L++ +++ ++P+ F+N+K+ L V P
Sbjct: 1601 FFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNIKQFELTVFP 1660
Query: 858 --RGGTLWGFVSLLQASPYLRRLELHMYEEGSEAVNKGFMERPLEVPHLHLEEIILSGFS 1031
L +L+A P L++LEL+++ K E PH HL + ++GF
Sbjct: 1661 FDDDDDLSWIGYILKAFPLLQKLELNLFSPSFTKQPKEIERFLPECPHRHLSILQINGFY 1720
Query: 1032 GNSHYKEFASFMLNSATNLRTLTILSS 1112
GN H + ++L++ L L + S
Sbjct: 1721 GNQHEVDLLKYLLHNLVALELLVVAPS 1747
>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 91.7 bits (226), Expect = 4e-16
Identities = 84/327 (25%), Positives = 146/327 (44%), Gaps = 10/327 (3%)
Frame = +3
Query: 162 KDFAHHIDQWIEMAMDQRNQYPRIGLPH---FVIQREIYRDGNLYV-QFPS-LFSSQEIG 326
K+F HIDQWI A+ + + + L F ++R+ + +FP LFS
Sbjct: 119 KEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPGGR 178
Query: 327 SSVKCWSLKGCSFRSLYSKG-YSSLVDLRLKKVLIVGDTIVSILSSCPNXXXXXXXXXXX 503
++K L C +L S +SL+ + L++V I + +LS+C +
Sbjct: 179 CTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLEWLSLCVCNG 238
Query: 504 XXXXKISGPSLKLKQLIILFCXXXXXXXXXXXXXXRFLYCGKWVKFEPINVPQLSNVIIR 683
S +L+LK L I C F Y G F NVP+L+ +
Sbjct: 239 LVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKASLE 298
Query: 684 TVLENS-CHALSYARGKLSSDVPHLESL-MLTLSPIEEKKIPKQFSLFSNLKKLVLLVRP 857
+++S + YA + D+P LE+L +L++ +++ ++P+ F+N+K+ L V P
Sbjct: 299 FFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNVKQFELTVFP 358
Query: 858 --RGGTLWGFVSLLQASPYLRRLELHMYEEGSEAVNKGFMERPLEVPHLHLEEIILSGFS 1031
L +L+A P L++LEL+++ K E PH HL + ++GF
Sbjct: 359 FDDDDDLSWIGYILKAFPLLQKLELNLFSPSFTKQPKEIERFLPECPHRHLSILQINGFY 418
Query: 1032 GNSHYKEFASFMLNSATNLRTLTILSS 1112
GN H + ++L++ L L + S
Sbjct: 419 GNQHEVDLLKYLLHNLVALELLVVAPS 445
>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 464
Score = 73.9 bits (180), Expect = 9e-11
Identities = 94/378 (24%), Positives = 144/378 (38%), Gaps = 4/378 (1%)
Frame = +3
Query: 3 LGFKRHDFVGFVVHVLYLDHFSVKDSSRTRFYLENDFLHFTDQWMMEMAISQMKDFAHHI 182
L +RH FV +V VL + R F L++DF++ I
Sbjct: 96 LDMERHSFVSWVNQVLRSHEGPTMEGLRICFDLDSDFMY-------------------EI 136
Query: 183 DQWIEMAMDQRNQYPRIGLPHFVIQREIYRDGNLYVQFPSLFSSQEIGSSVKCWSLKGCS 362
D WI +AM +R + I L + I+ I G+ FPS
Sbjct: 137 DSWITIAMQKRVKRLEIDLTN--IEPSIKTTGSY--AFPSGL------------------ 174
Query: 363 FRSLYSKGYSSLVDLRLKKVLIVGDTIVSILSS-CPNXXXXXXXXXXXXXXXKISGPSLK 539
L +SSL L+L V + G+ + +L S CP K+SG SLK
Sbjct: 175 ---LNDSSFSSLKTLQLNMVDVTGEALQHLLLSWCPLLEVLSIVNSTSLVSLKVSGSSLK 231
Query: 540 LKQLIILFCXXXXXXXXXXXXXXRFLYCGKWVKFEPINVPQLSNVIIRTVLENSCHALSY 719
LK L ++ C F Y G + +VP N++ + C
Sbjct: 232 LKYLEMVCCNNLKYLEITAASLVSFKYYGPLIGLPFKSVP---NLVDASFGGPFCQLTIE 288
Query: 720 ARGKLSSDVPHLESLMLTL-SPIEEKKIPKQFSLFSNLKKLVLL--VRPRGGTLWGFVSL 890
+ S + LE+L + S ++ P F + SN+K L + V L+ +SL
Sbjct: 289 NLYQFSLYILQLETLRFDVGSAYLMREFPTNFPILSNVKHLEVTTAVSAVAHCLFPCLSL 348
Query: 891 LQASPYLRRLELHMYEEGSEAVNKGFMERPLEVPHLHLEEIILSGFSGNSHYKEFASFML 1070
L+ P L R L + S V + + P + H L+ + + GF GN+ E + L
Sbjct: 349 LKGCPLLHRFTLKVISCESTLVCRASQKVPEDHSHPCLKVVEVLGFQGNAAEVELVLYFL 408
Query: 1071 NSATNLRTLTILSSIICY 1124
+A L+ L I CY
Sbjct: 409 RNAAVLKNLIISPCAPCY 426
>dbj|BAC83334.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125600679|gb|EAZ40255.1| hypothetical protein
OsJ_24698 [Oryza sativa Japonica Group]
Length = 534
Score = 73.2 bits (178), Expect = 2e-10
Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 9/323 (2%)
Frame = +3
Query: 159 MKDF-AHHIDQWIEMAMDQRNQYPRIGLPHFVIQREIYRDGNLYVQFPSLFSSQEIGSSV 335
M+DF A+ ID+ I +A+ + ++ + L ++ R +FP + G SV
Sbjct: 168 MEDFYANLIDKLISIAICRGVEH--LNLETYLYSANDQRPSPAPYKFPLSLFADGKGLSV 225
Query: 336 KCWSLKGCSFR-SLYSKGYSSLVDLRLKKVLIVGDTIVSILSSCPNXXXXXXXXXXXXXX 512
L C+ + G+ SLV+L ++ I D I +++ +CPN
Sbjct: 226 TKLILAECTLSIPVGFAGFKSLVELSFTEMHISEDMIQTLIENCPNLECFRLRLCSGARH 285
Query: 513 XKISGPSLKLKQLIILFCXXXXXXXXXXXXXXRFLYCGKWVKFEPINVPQLSNVIIRTVL 692
KI+ P L+L+++++ C +F Y G + +VP + + +
Sbjct: 286 LKIASPHLQLREIMVKSCLQITHMELFAPKLQQFTYRGPCISMVLSSVPLMEHACLDYEG 345
Query: 693 ENSCHALSYARGKLSSDVPHLESLMLTL------SPIEEKKIPKQFSLFSNLKKLVLLVR 854
++ Y GKLS D L SL + L +P+ + +P + F NLK L L
Sbjct: 346 RRDGESVKYILGKLSQDFSLLTSLSIVLNTYRLKNPVIPEVVP---TPFKNLKSLTLGAI 402
Query: 855 PRGGTLWGFVS-LLQASPYLRRLELHMYEEGSEAVNKGFMERPLEVPHLHLEEIILSGFS 1031
G+V+ LL+ +P L ++ + G + P + H HL ++ F
Sbjct: 403 MHCNDDIGWVTMLLEVAPVLESFQIELLTNEKREHPGGVLWEPSDNAHRHLRQVKFYRFR 462
Query: 1032 GNSHYKEFASFMLNSATNLRTLT 1100
A +L A L+T+T
Sbjct: 463 MRQADVALAGLLLARAPLLQTMT 485
>ref|XP_003577168.1| PREDICTED: LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein
At5g54820-like [Brachypodium distachyon]
Length = 449
Score = 72.0 bits (175), Expect = 3e-10
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 13/327 (3%)
Frame = +3
Query: 162 KDFAHHIDQWIEMAMDQR------NQYPRIGLP-HFVIQREIYRDGNL-YVQFPSLFSSQ 317
++ A HID W+ A+ N P +G H+ ++ N Y+Q L S
Sbjct: 106 EEHADHIDGWVYFAIASMAKILTLNFSPYLGYENHYTFPCHLFNSKNASYLQALRLDSVN 165
Query: 318 EIGSSVKCWSLKGCSFRSLYSKGYSSLVDLRLKKVLIVGDTIVSILSSCPNXXXXXXXXX 497
+ S C G+++L L L VL++ D + LS CP
Sbjct: 166 LVPSIDFC--------------GFANLKMLALDHVLVMQD-LQYFLSKCPALEWLSIQRC 210
Query: 498 XXXXXXKISGPSLKLKQLIILFCXXXXXXXXXXXXXXRFLYCGKWVKFEPINVPQLSNVI 677
S P +LK L + C F Y G + + +L I
Sbjct: 211 YLKCNCHASAPLGRLKYLCVKNCEVDRIEFAAPNLNT-FEYRGYQILIKFHECSKLKMAI 269
Query: 678 IRTVLENSCHALSYARGKLSSDVPHLESLMLTLSPIEEKKIPK-QFS--LFSNLKKLVLL 848
I + ++ L Y L + VPH+E+L + ++ KIP+ +++ +FS+LK L L
Sbjct: 270 IHIIGHST---LEYVFTGLPNAVPHVETLHVETF-VDIPKIPEFRYAPLVFSHLKHLALR 325
Query: 849 VRPRGGTL-WGFVSLLQASPYLRRLELHMY-EEGSEAVNKGFMERPLEVPHLHLEEIILS 1022
VR G T LL+A+P+L L L MY EG + + ++ ++ PH HL+ ++
Sbjct: 326 VRLFGKTTALQLACLLEAAPFLEDLHLDMYCFEGVDYIGSA-LDMIVDSPHYHLKTACMT 384
Query: 1023 GFSGNSHYKEFASFMLNSATNLRTLTI 1103
GF GN E A +++ +A L +TI
Sbjct: 385 GFRGNRGQIELAKYIMRNAVELERMTI 411