BLASTX nr result
ID: Coptis25_contig00002702
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002702 (767 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGF25313.1| elongation factor 1-alpha, partial [x Doritaenops... 196 5e-48 ref|XP_004163381.1| PREDICTED: LOW QUALITY PROTEIN: elongation f... 196 5e-48 ref|XP_004149547.1| PREDICTED: elongation factor 1-alpha-like [C... 196 5e-48 ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [C... 196 5e-48 gb|AFW90638.1| elongation factor 1-alpha-like protein [Solanum t... 196 5e-48 >gb|AGF25313.1| elongation factor 1-alpha, partial [x Doritaenopsis hybrid cultivar] Length = 206 Score = 196 bits (498), Expect = 5e-48 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +2 Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID Sbjct: 51 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 110 Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC Sbjct: 111 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 144 Score = 63.9 bits (154), Expect = 4e-08 Identities = 30/30 (100%), Positives = 30/30 (100%) Frame = +1 Query: 271 INIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360 INIVVIGHVDSGKSTTTGHLIYKLGGIDKR Sbjct: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKR 30 >ref|XP_004163381.1| PREDICTED: LOW QUALITY PROTEIN: elongation factor 1-alpha-like [Cucumis sativus] Length = 449 Score = 196 bits (498), Expect = 5e-48 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +2 Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID Sbjct: 58 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117 Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151 Score = 77.0 bits (188), Expect = 4e-12 Identities = 36/37 (97%), Positives = 36/37 (97%) Frame = +1 Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360 MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKR Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37 >ref|XP_004149547.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus] Length = 449 Score = 196 bits (498), Expect = 5e-48 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +2 Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID Sbjct: 58 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117 Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151 Score = 77.0 bits (188), Expect = 4e-12 Identities = 36/37 (97%), Positives = 36/37 (97%) Frame = +1 Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360 MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKR Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37 >ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus] gi|449505290|ref|XP_004162426.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus] Length = 447 Score = 196 bits (498), Expect = 5e-48 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +2 Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID Sbjct: 58 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117 Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151 Score = 77.0 bits (188), Expect = 4e-12 Identities = 36/37 (97%), Positives = 36/37 (97%) Frame = +1 Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360 MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKR Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37 >gb|AFW90638.1| elongation factor 1-alpha-like protein [Solanum tuberosum] Length = 309 Score = 196 bits (498), Expect = 5e-48 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +2 Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID Sbjct: 58 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117 Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151 Score = 76.3 bits (186), Expect = 7e-12 Identities = 35/37 (94%), Positives = 37/37 (100%) Frame = +1 Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360 MGKEK+HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKR Sbjct: 1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37