BLASTX nr result

ID: Coptis25_contig00002702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002702
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGF25313.1| elongation factor 1-alpha, partial [x Doritaenops...   196   5e-48
ref|XP_004163381.1| PREDICTED: LOW QUALITY PROTEIN: elongation f...   196   5e-48
ref|XP_004149547.1| PREDICTED: elongation factor 1-alpha-like [C...   196   5e-48
ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [C...   196   5e-48
gb|AFW90638.1| elongation factor 1-alpha-like protein [Solanum t...   196   5e-48

>gb|AGF25313.1| elongation factor 1-alpha, partial [x Doritaenopsis hybrid
           cultivar]
          Length = 206

 Score =  196 bits (498), Expect = 5e-48
 Identities = 94/94 (100%), Positives = 94/94 (100%)
 Frame = +2

Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664
           WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID
Sbjct: 51  WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 110

Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766
           STTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 111 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 144



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +1

Query: 271 INIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360
           INIVVIGHVDSGKSTTTGHLIYKLGGIDKR
Sbjct: 1   INIVVIGHVDSGKSTTTGHLIYKLGGIDKR 30


>ref|XP_004163381.1| PREDICTED: LOW QUALITY PROTEIN: elongation factor 1-alpha-like
           [Cucumis sativus]
          Length = 449

 Score =  196 bits (498), Expect = 5e-48
 Identities = 94/94 (100%), Positives = 94/94 (100%)
 Frame = +2

Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664
           WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID
Sbjct: 58  WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117

Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766
           STTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +1

Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKR
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37


>ref|XP_004149547.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus]
          Length = 449

 Score =  196 bits (498), Expect = 5e-48
 Identities = 94/94 (100%), Positives = 94/94 (100%)
 Frame = +2

Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664
           WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID
Sbjct: 58  WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117

Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766
           STTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +1

Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKR
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37


>ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus]
           gi|449505290|ref|XP_004162426.1| PREDICTED: elongation
           factor 1-alpha-like [Cucumis sativus]
          Length = 447

 Score =  196 bits (498), Expect = 5e-48
 Identities = 94/94 (100%), Positives = 94/94 (100%)
 Frame = +2

Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664
           WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID
Sbjct: 58  WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117

Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766
           STTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +1

Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKR
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37


>gb|AFW90638.1| elongation factor 1-alpha-like protein [Solanum tuberosum]
          Length = 309

 Score =  196 bits (498), Expect = 5e-48
 Identities = 94/94 (100%), Positives = 94/94 (100%)
 Frame = +2

Query: 485 WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 664
           WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID
Sbjct: 58  WVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID 117

Query: 665 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 766
           STTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 118 STTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151



 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 250 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR 360
           MGKEK+HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKR
Sbjct: 1   MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKR 37


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