BLASTX nr result

ID: Coptis25_contig00002701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002701
         (3117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302085.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-54
ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251...   132   2e-54
emb|CBI25055.3| unnamed protein product [Vitis vinifera]              132   2e-54
ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264...   127   2e-53
emb|CAN80313.1| hypothetical protein VITISV_020758 [Vitis vinifera]   127   2e-53

>ref|XP_002302085.1| predicted protein [Populus trichocarpa] gi|222843811|gb|EEE81358.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  130 bits (327), Expect(2) = 1e-54
 Identities = 62/99 (62%), Positives = 77/99 (77%)
 Frame = +1

Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
           GD + R+GSGGESIYGG F DE+F L+H+G G LSM+N+GP++N SQFFI F+   HLDG
Sbjct: 71  GDFSKRNGSGGESIYGGKFADENFILRHEGAGLLSMANSGPDTNGSQFFIIFKPHVHLDG 130

Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGE 711
            HVVFGK+V+G   +KKIE AGS  G+P   VKIV+CGE
Sbjct: 131 KHVVFGKVVKGMDMVKKIEQAGSAGGQPAGPVKIVDCGE 169



 Score =  112 bits (280), Expect(2) = 1e-54
 Identities = 53/68 (77%), Positives = 56/68 (82%)
 Frame = +3

Query: 132 PQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYKGCPFTR 311
           P VFLDVS+DGDPAER+  ELF DVVPKTAENFRALCTGE G G  +GKPLHYKGC F R
Sbjct: 2   PLVFLDVSIDGDPAERIFIELFADVVPKTAENFRALCTGEKGIGKTTGKPLHYKGCSFHR 61

Query: 312 IAKGLMAQ 335
           I KG MAQ
Sbjct: 62  IIKGFMAQ 69


>ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251093 [Vitis vinifera]
          Length = 702

 Score =  132 bits (333), Expect(2) = 2e-54
 Identities = 62/105 (59%), Positives = 78/105 (74%)
 Frame = +1

Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
           GD +  +G+GGESIYGG F DE+F   H+G G+LSM+N+GPN+N SQFF+TF+   HLDG
Sbjct: 76  GDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDG 135

Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLEGAV 729
            HVVFGK+VQG  TLKKIE  G+  G+P   VKIV+CGE  E  +
Sbjct: 136 KHVVFGKVVQGIDTLKKIEQLGTGDGKPARLVKIVDCGETSENKI 180



 Score =  108 bits (271), Expect(2) = 2e-54
 Identities = 52/74 (70%), Positives = 58/74 (78%)
 Frame = +3

Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
           MT  + P VFLDVS+DGDP E+++ ELF DVVPKTAENFRALCTGE G G  +GKPLHYK
Sbjct: 1   MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 294 GCPFTRIAKGLMAQ 335
           G  F RI KG MAQ
Sbjct: 61  GSFFHRIIKGFMAQ 74


>emb|CBI25055.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  132 bits (333), Expect(2) = 2e-54
 Identities = 62/105 (59%), Positives = 78/105 (74%)
 Frame = +1

Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
           GD +  +G+GGESIYGG F DE+F   H+G G+LSM+N+GPN+N SQFF+TF+   HLDG
Sbjct: 76  GDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDG 135

Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLEGAV 729
            HVVFGK+VQG  TLKKIE  G+  G+P   VKIV+CGE  E  +
Sbjct: 136 KHVVFGKVVQGIDTLKKIEQLGTGDGKPARLVKIVDCGETSENKI 180



 Score =  108 bits (271), Expect(2) = 2e-54
 Identities = 52/74 (70%), Positives = 58/74 (78%)
 Frame = +3

Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
           MT  + P VFLDVS+DGDP E+++ ELF DVVPKTAENFRALCTGE G G  +GKPLHYK
Sbjct: 1   MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 294 GCPFTRIAKGLMAQ 335
           G  F RI KG MAQ
Sbjct: 61  GSFFHRIIKGFMAQ 74


>ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264514 [Vitis vinifera]
          Length = 796

 Score =  127 bits (319), Expect(2) = 2e-53
 Identities = 64/102 (62%), Positives = 73/102 (71%)
 Frame = +1

Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
           GD   RDGSGGESIYGG F DES  LKHDG G LSMS    ++  SQF +TF A HHLD 
Sbjct: 76  GDFLRRDGSGGESIYGGKFPDESPRLKHDGPGLLSMSVADRDTVGSQFIVTFSANHHLDR 135

Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLE 720
            +VVFGKLVQGH  LK+IES G ++G PT  VKI+ CGE+ E
Sbjct: 136 KYVVFGKLVQGHEVLKRIESVGDEEGIPTATVKIIYCGEIPE 177



 Score =  111 bits (278), Expect(2) = 2e-53
 Identities = 53/74 (71%), Positives = 58/74 (78%)
 Frame = +3

Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
           MT  + P V+LDVS+DGDP ERM+FELF DV PKTAENFRALCTGE G GP +GKPLHYK
Sbjct: 1   MTKKKNPLVYLDVSIDGDPIERMVFELFSDVAPKTAENFRALCTGEKGIGPKTGKPLHYK 60

Query: 294 GCPFTRIAKGLMAQ 335
           G  F RI KG M Q
Sbjct: 61  GSFFHRIIKGSMVQ 74



 Score = 80.5 bits (197), Expect = 3e-12
 Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 15/148 (10%)
 Frame = +1

Query: 1105 GPS-KPKHSSHTLAGKQSPIVVEKDAIAPL-PKGVTADMV----GKSPQENGNLQSNGVK 1266
            GP   PK     +AG  SP+V +++A++    KG  AD++    G+SP+ENG+ +SNG++
Sbjct: 323  GPDCNPKKPPQLIAGNGSPVVEDREAVSTRHKKGEVADVLEKEEGESPKENGDRRSNGIE 382

Query: 1267 MDRSNSSADRQPDLV-DLPGXXXXXXXXXXXXXXXXXXXXXRRSLSKSPSVRRERSMSKS 1443
              +S+ SA+RQPD+V D PG                     RRSLSKSPSV R +S+S+S
Sbjct: 383  EVKSDRSAERQPDVVDDHPGKSRSRSMSPKRTMSKSMSISPRRSLSKSPSVSRSQSVSRS 442

Query: 1444 LTP-----RSAVRSP---ERVPQQSRSI 1503
             TP     R+  RSP    R P +SR++
Sbjct: 443  -TPRPPRSRTVSRSPSVSRRAPLRSRTV 469


>emb|CAN80313.1| hypothetical protein VITISV_020758 [Vitis vinifera]
          Length = 728

 Score =  127 bits (319), Expect(2) = 2e-53
 Identities = 64/102 (62%), Positives = 73/102 (71%)
 Frame = +1

Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
           GD   RDGSGGESIYGG F DES  LKHDG G LSMS    ++  SQF +TF A HHLD 
Sbjct: 76  GDFLRRDGSGGESIYGGKFPDESPRLKHDGPGLLSMSVADRDTVGSQFIVTFSANHHLDR 135

Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLE 720
            +VVFGKLVQGH  LK+IES G ++G PT  VKI+ CGE+ E
Sbjct: 136 KYVVFGKLVQGHEVLKRIESVGDEEGIPTATVKIIYCGEIPE 177



 Score =  111 bits (278), Expect(2) = 2e-53
 Identities = 53/74 (71%), Positives = 58/74 (78%)
 Frame = +3

Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
           MT  + P V+LDVS+DGDP ERM+FELF DV PKTAENFRALCTGE G GP +GKPLHYK
Sbjct: 1   MTKKKNPLVYLDVSIDGDPIERMVFELFSDVAPKTAENFRALCTGEKGIGPKTGKPLHYK 60

Query: 294 GCPFTRIAKGLMAQ 335
           G  F RI KG M Q
Sbjct: 61  GSFFHRIIKGSMVQ 74



 Score = 75.1 bits (183), Expect = 1e-10
 Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
 Frame = +1

Query: 1141 AGKQSPIVVEKDAIAPL-PKGVTADMV----GKSPQENGNLQSNGVKMDRSNSSADRQPD 1305
            +G  SP+V +++A++    KG  AD++    G+SP+ENG+ +SNG++  +S+ SA+RQPD
Sbjct: 359  SGNGSPVVEDREAVSTRHKKGEVADVLEKEEGESPKENGDRRSNGIEEVKSDRSAERQPD 418

Query: 1306 LV-DLPGXXXXXXXXXXXXXXXXXXXXXRRSLSKSPSVRRERSMSKSLTP-----RSAVR 1467
            +V D PG                     RRSLSKSPSV R +S+S+S TP     R+  R
Sbjct: 419  VVDDHPGKSRSRSMSPKRTMSKSMSISPRRSLSKSPSVSRSQSVSRS-TPRPPRSRTVSR 477

Query: 1468 SP---ERVPQQSRSI 1503
            SP    R P +SR++
Sbjct: 478  SPSVSRRAPLRSRTV 492


Top