BLASTX nr result
ID: Coptis25_contig00002701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002701
(3117 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302085.1| predicted protein [Populus trichocarpa] gi|2... 130 1e-54
ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251... 132 2e-54
emb|CBI25055.3| unnamed protein product [Vitis vinifera] 132 2e-54
ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264... 127 2e-53
emb|CAN80313.1| hypothetical protein VITISV_020758 [Vitis vinifera] 127 2e-53
>ref|XP_002302085.1| predicted protein [Populus trichocarpa] gi|222843811|gb|EEE81358.1|
predicted protein [Populus trichocarpa]
Length = 169
Score = 130 bits (327), Expect(2) = 1e-54
Identities = 62/99 (62%), Positives = 77/99 (77%)
Frame = +1
Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
GD + R+GSGGESIYGG F DE+F L+H+G G LSM+N+GP++N SQFFI F+ HLDG
Sbjct: 71 GDFSKRNGSGGESIYGGKFADENFILRHEGAGLLSMANSGPDTNGSQFFIIFKPHVHLDG 130
Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGE 711
HVVFGK+V+G +KKIE AGS G+P VKIV+CGE
Sbjct: 131 KHVVFGKVVKGMDMVKKIEQAGSAGGQPAGPVKIVDCGE 169
Score = 112 bits (280), Expect(2) = 1e-54
Identities = 53/68 (77%), Positives = 56/68 (82%)
Frame = +3
Query: 132 PQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYKGCPFTR 311
P VFLDVS+DGDPAER+ ELF DVVPKTAENFRALCTGE G G +GKPLHYKGC F R
Sbjct: 2 PLVFLDVSIDGDPAERIFIELFADVVPKTAENFRALCTGEKGIGKTTGKPLHYKGCSFHR 61
Query: 312 IAKGLMAQ 335
I KG MAQ
Sbjct: 62 IIKGFMAQ 69
>ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251093 [Vitis vinifera]
Length = 702
Score = 132 bits (333), Expect(2) = 2e-54
Identities = 62/105 (59%), Positives = 78/105 (74%)
Frame = +1
Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
GD + +G+GGESIYGG F DE+F H+G G+LSM+N+GPN+N SQFF+TF+ HLDG
Sbjct: 76 GDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDG 135
Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLEGAV 729
HVVFGK+VQG TLKKIE G+ G+P VKIV+CGE E +
Sbjct: 136 KHVVFGKVVQGIDTLKKIEQLGTGDGKPARLVKIVDCGETSENKI 180
Score = 108 bits (271), Expect(2) = 2e-54
Identities = 52/74 (70%), Positives = 58/74 (78%)
Frame = +3
Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
MT + P VFLDVS+DGDP E+++ ELF DVVPKTAENFRALCTGE G G +GKPLHYK
Sbjct: 1 MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60
Query: 294 GCPFTRIAKGLMAQ 335
G F RI KG MAQ
Sbjct: 61 GSFFHRIIKGFMAQ 74
>emb|CBI25055.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 132 bits (333), Expect(2) = 2e-54
Identities = 62/105 (59%), Positives = 78/105 (74%)
Frame = +1
Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
GD + +G+GGESIYGG F DE+F H+G G+LSM+N+GPN+N SQFF+TF+ HLDG
Sbjct: 76 GDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDG 135
Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLEGAV 729
HVVFGK+VQG TLKKIE G+ G+P VKIV+CGE E +
Sbjct: 136 KHVVFGKVVQGIDTLKKIEQLGTGDGKPARLVKIVDCGETSENKI 180
Score = 108 bits (271), Expect(2) = 2e-54
Identities = 52/74 (70%), Positives = 58/74 (78%)
Frame = +3
Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
MT + P VFLDVS+DGDP E+++ ELF DVVPKTAENFRALCTGE G G +GKPLHYK
Sbjct: 1 MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60
Query: 294 GCPFTRIAKGLMAQ 335
G F RI KG MAQ
Sbjct: 61 GSFFHRIIKGFMAQ 74
>ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264514 [Vitis vinifera]
Length = 796
Score = 127 bits (319), Expect(2) = 2e-53
Identities = 64/102 (62%), Positives = 73/102 (71%)
Frame = +1
Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
GD RDGSGGESIYGG F DES LKHDG G LSMS ++ SQF +TF A HHLD
Sbjct: 76 GDFLRRDGSGGESIYGGKFPDESPRLKHDGPGLLSMSVADRDTVGSQFIVTFSANHHLDR 135
Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLE 720
+VVFGKLVQGH LK+IES G ++G PT VKI+ CGE+ E
Sbjct: 136 KYVVFGKLVQGHEVLKRIESVGDEEGIPTATVKIIYCGEIPE 177
Score = 111 bits (278), Expect(2) = 2e-53
Identities = 53/74 (71%), Positives = 58/74 (78%)
Frame = +3
Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
MT + P V+LDVS+DGDP ERM+FELF DV PKTAENFRALCTGE G GP +GKPLHYK
Sbjct: 1 MTKKKNPLVYLDVSIDGDPIERMVFELFSDVAPKTAENFRALCTGEKGIGPKTGKPLHYK 60
Query: 294 GCPFTRIAKGLMAQ 335
G F RI KG M Q
Sbjct: 61 GSFFHRIIKGSMVQ 74
Score = 80.5 bits (197), Expect = 3e-12
Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 15/148 (10%)
Frame = +1
Query: 1105 GPS-KPKHSSHTLAGKQSPIVVEKDAIAPL-PKGVTADMV----GKSPQENGNLQSNGVK 1266
GP PK +AG SP+V +++A++ KG AD++ G+SP+ENG+ +SNG++
Sbjct: 323 GPDCNPKKPPQLIAGNGSPVVEDREAVSTRHKKGEVADVLEKEEGESPKENGDRRSNGIE 382
Query: 1267 MDRSNSSADRQPDLV-DLPGXXXXXXXXXXXXXXXXXXXXXRRSLSKSPSVRRERSMSKS 1443
+S+ SA+RQPD+V D PG RRSLSKSPSV R +S+S+S
Sbjct: 383 EVKSDRSAERQPDVVDDHPGKSRSRSMSPKRTMSKSMSISPRRSLSKSPSVSRSQSVSRS 442
Query: 1444 LTP-----RSAVRSP---ERVPQQSRSI 1503
TP R+ RSP R P +SR++
Sbjct: 443 -TPRPPRSRTVSRSPSVSRRAPLRSRTV 469
>emb|CAN80313.1| hypothetical protein VITISV_020758 [Vitis vinifera]
Length = 728
Score = 127 bits (319), Expect(2) = 2e-53
Identities = 64/102 (62%), Positives = 73/102 (71%)
Frame = +1
Query: 415 GDVTSRDGSGGESIYGGNFEDESFTLKHDGRGYLSMSNTGPNSNNSQFFITFRAAHHLDG 594
GD RDGSGGESIYGG F DES LKHDG G LSMS ++ SQF +TF A HHLD
Sbjct: 76 GDFLRRDGSGGESIYGGKFPDESPRLKHDGPGLLSMSVADRDTVGSQFIVTFSANHHLDR 135
Query: 595 LHVVFGKLVQGHRTLKKIESAGSKQGEPTFFVKIVNCGELLE 720
+VVFGKLVQGH LK+IES G ++G PT VKI+ CGE+ E
Sbjct: 136 KYVVFGKLVQGHEVLKRIESVGDEEGIPTATVKIIYCGEIPE 177
Score = 111 bits (278), Expect(2) = 2e-53
Identities = 53/74 (71%), Positives = 58/74 (78%)
Frame = +3
Query: 114 MTNNRLPQVFLDVSVDGDPAERMIFELFHDVVPKTAENFRALCTGEHGKGPVSGKPLHYK 293
MT + P V+LDVS+DGDP ERM+FELF DV PKTAENFRALCTGE G GP +GKPLHYK
Sbjct: 1 MTKKKNPLVYLDVSIDGDPIERMVFELFSDVAPKTAENFRALCTGEKGIGPKTGKPLHYK 60
Query: 294 GCPFTRIAKGLMAQ 335
G F RI KG M Q
Sbjct: 61 GSFFHRIIKGSMVQ 74
Score = 75.1 bits (183), Expect = 1e-10
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
Frame = +1
Query: 1141 AGKQSPIVVEKDAIAPL-PKGVTADMV----GKSPQENGNLQSNGVKMDRSNSSADRQPD 1305
+G SP+V +++A++ KG AD++ G+SP+ENG+ +SNG++ +S+ SA+RQPD
Sbjct: 359 SGNGSPVVEDREAVSTRHKKGEVADVLEKEEGESPKENGDRRSNGIEEVKSDRSAERQPD 418
Query: 1306 LV-DLPGXXXXXXXXXXXXXXXXXXXXXRRSLSKSPSVRRERSMSKSLTP-----RSAVR 1467
+V D PG RRSLSKSPSV R +S+S+S TP R+ R
Sbjct: 419 VVDDHPGKSRSRSMSPKRTMSKSMSISPRRSLSKSPSVSRSQSVSRS-TPRPPRSRTVSR 477
Query: 1468 SP---ERVPQQSRSI 1503
SP R P +SR++
Sbjct: 478 SPSVSRRAPLRSRTV 492