BLASTX nr result

ID: Coptis25_contig00002694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002694
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vini...   190   6e-89
gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|20729882...   190   2e-88
ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vi...   190   5e-88
ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vi...   190   5e-88
ref|XP_002306180.1| predicted protein [Populus trichocarpa] gi|2...   189   7e-84

>gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vinifera]
          Length = 242

 Score =  190 bits (482), Expect(2) = 6e-89
 Identities = 86/88 (97%), Positives = 88/88 (100%)
 Frame = +2

Query: 380 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 559
           MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 560 LRPDLKRGNFTEEEDELIIKLHSLLGNK 643
           LRPDLKRGNFT+EEDELIIKLHSLLGNK
Sbjct: 61  LRPDLKRGNFTDEEDELIIKLHSLLGNK 88



 Score =  166 bits (419), Expect(2) = 6e-89
 Identities = 84/158 (53%), Positives = 101/158 (63%)
 Frame = +3

Query: 747  PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYE 926
            PGRTDNEIKNYWNTHIRRKLLSRG+DP THR +NEP  DV T+SF  V K+EE +  G+ 
Sbjct: 97   PGRTDNEIKNYWNTHIRRKLLSRGIDPLTHRPINEPAVDVATVSFGGVLKKEEVMSSGFG 156

Query: 927  CKEEKTSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRSLCFSCSLGLLNSKDXXX 1106
            CK         EE CPDLNLEL+ISPP++ P    + S ERR LCF CSLGL  SK+   
Sbjct: 157  CKSRNPD----EENCPDLNLELRISPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE--- 209

Query: 1107 XXXXXXXXXXXXXXXXXXXNDFLGLRSGILDFRNWDMK 1220
                               +DFLG+ +G+LD+RN +MK
Sbjct: 210  -------CSCSSGSGNGSSDDFLGMNNGVLDYRNLEMK 240


>gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|207298825|gb|ACI23564.1| MYB-like
           protein 3 [Gossypium barbadense]
          Length = 264

 Score =  190 bits (483), Expect(2) = 2e-88
 Identities = 87/88 (98%), Positives = 88/88 (100%)
 Frame = +2

Query: 380 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 559
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 560 LRPDLKRGNFTEEEDELIIKLHSLLGNK 643
           LRPDLKRGNFTEEEDELIIKLHSLLGNK
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNK 88



 Score =  164 bits (414), Expect(2) = 2e-88
 Identities = 89/170 (52%), Positives = 108/170 (63%), Gaps = 12/170 (7%)
 Frame = +3

Query: 747  PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKI----- 911
            PGRTDNEIKNYWNTHIRRKLLSRG+DPATHR +NE   DV TISF+   +E+EKI     
Sbjct: 97   PGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNEASQDVTTISFSGAKEEKEKINTNSN 156

Query: 912  --VVGYECKEEKTSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRSLCFSCSLGLL 1085
               +G+  K+EK   +Q  ERCPDLNL+L+ISPPYYQ  Q     +  R+LCF CSLG+ 
Sbjct: 157  NNPIGFITKDEKKIPVQ--ERCPDLNLDLRISPPYYQQTQPESFKTGGRTLCFICSLGVK 214

Query: 1086 NSKDXXXXXXXXXXXXXXXXXXXXXXN-----DFLGLRSGILDFRNWDMK 1220
            NSKD                      N     DFLGL+SGIL++R+ +MK
Sbjct: 215  NSKDCTCSTITTAAGSSSSSSSHSNSNNSSGYDFLGLKSGILEYRSLEMK 264


>ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
           gi|119220854|gb|ABL61515.1| R2R3 Myb4a C2 repressor
           motif protein [Vitis vinifera]
          Length = 251

 Score =  190 bits (483), Expect(2) = 5e-88
 Identities = 87/88 (98%), Positives = 88/88 (100%)
 Frame = +2

Query: 380 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 559
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 560 LRPDLKRGNFTEEEDELIIKLHSLLGNK 643
           LRPDLKRGNFTEEEDELIIKLHSLLGNK
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNK 88



 Score =  162 bits (410), Expect(2) = 5e-88
 Identities = 87/165 (52%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
 Frame = +3

Query: 747  PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKIVV--- 917
            PGRTDNEIKNYWNTHIRRKLL+RG+DP+THR +NEP  DV TISFA+  KEEEKI +   
Sbjct: 97   PGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPINEPSPDVTTISFAAAVKEEEKINISST 156

Query: 918  -GYECKEEKTSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRS---LCFSCSLGLL 1085
             G+ CK EK  +    E+CPDLNLEL+ISPPY    +  +K+  R S   LCF+CSLG+ 
Sbjct: 157  GGFGCKTEKNPV---TEKCPDLNLELRISPPYQPQAETPLKTGGRSSSTTLCFACSLGIP 213

Query: 1086 NSKDXXXXXXXXXXXXXXXXXXXXXXNDFLGLRSGILDFRNWDMK 1220
            NS++                       DFLGL SG+LD+R  +MK
Sbjct: 214  NSEECSCSIGTSSGSSSSGY-------DFLGLTSGVLDYRGLEMK 251


>ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
           gi|297734985|emb|CBI17347.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  190 bits (482), Expect(2) = 5e-88
 Identities = 86/88 (97%), Positives = 88/88 (100%)
 Frame = +2

Query: 380 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 559
           MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 560 LRPDLKRGNFTEEEDELIIKLHSLLGNK 643
           LRPDLKRGNFT+EEDELIIKLHSLLGNK
Sbjct: 61  LRPDLKRGNFTDEEDELIIKLHSLLGNK 88



 Score =  162 bits (411), Expect(2) = 5e-88
 Identities = 83/158 (52%), Positives = 100/158 (63%)
 Frame = +3

Query: 747  PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYE 926
            PGRTDNEIKNYWNTHIRRKLLSRG+DP THR +NE   DV T+SF  V K+EE +  G+ 
Sbjct: 97   PGRTDNEIKNYWNTHIRRKLLSRGIDPLTHRPINEAAVDVATVSFGGVLKKEEVMSSGFG 156

Query: 927  CKEEKTSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRSLCFSCSLGLLNSKDXXX 1106
            CK         EE CPDLNLEL+ISPP++ P    + S ERR LCF CSLGL  SK+   
Sbjct: 157  CKSRNPD----EENCPDLNLELRISPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE--- 209

Query: 1107 XXXXXXXXXXXXXXXXXXXNDFLGLRSGILDFRNWDMK 1220
                               +DFLG+ +G+LD+RN +MK
Sbjct: 210  -------CSCSSGSGNGSSDDFLGMNNGVLDYRNLEMK 240


>ref|XP_002306180.1| predicted protein [Populus trichocarpa] gi|222849144|gb|EEE86691.1|
           predicted protein [Populus trichocarpa]
           gi|225626253|gb|ACN97176.1| MYB transcription factor
           [Populus trichocarpa]
          Length = 268

 Score =  189 bits (479), Expect(2) = 7e-84
 Identities = 86/88 (97%), Positives = 87/88 (98%)
 Frame = +2

Query: 380 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 559
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IR HGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRTHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 560 LRPDLKRGNFTEEEDELIIKLHSLLGNK 643
           LRPDLKRGNFTEEEDELIIKLHSLLGNK
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNK 88



 Score =  150 bits (378), Expect(2) = 7e-84
 Identities = 88/176 (50%), Positives = 108/176 (61%), Gaps = 18/176 (10%)
 Frame = +3

Query: 747  PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVK-TISFASVT--KEE----- 902
            PGRTDNEIKNYWNTHIRRKLL+RG+DPATHR +NEP  +   TISF++ T  KEE     
Sbjct: 97   PGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEPAQEASTTISFSTTTSVKEESLSSV 156

Query: 903  ------EKIV--VGYECKEEKTSIIQREERCPDLNLELQISPPYYQPP--QESMKSSERR 1052
                  EKI+    + CKEEKT +   +ERCPDLNLEL+IS P    P   ++ K+    
Sbjct: 157  KEESNKEKIISAAAFICKEEKTPV---QERCPDLNLELRISLPCQNQPDRHQAFKTGGST 213

Query: 1053 SLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXXXXNDFLGLRSGILDFRNWDMK 1220
            SLCF+CSLGL NSKD                       DFLG++SG+LD+R  +MK
Sbjct: 214  SLCFACSLGLQNSKDCSCSVIVGTIGSSSSAGSKTGY-DFLGMKSGVLDYRGLEMK 268


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