BLASTX nr result

ID: Coptis25_contig00002688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002688
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284055.2| PREDICTED: uncharacterized protein LOC100245...    88   2e-15
emb|CBI19200.3| unnamed protein product [Vitis vinifera]               88   2e-15
emb|CAN82663.1| hypothetical protein VITISV_004929 [Vitis vinifera]    87   4e-15
ref|XP_002513964.1| conserved hypothetical protein [Ricinus comm...    87   5e-15
ref|XP_002334816.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12

>ref|XP_002284055.2| PREDICTED: uncharacterized protein LOC100245494 [Vitis vinifera]
          Length = 174

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
 Frame = +2

Query: 74  GWSETDIRCKKHPKQRQSPGVCSACLRERLAQLTSRNNKITT-----AXXXXXXXXXXXX 238
           G S++++ C+KHPK RQSPGVCS CLRERL+QL++ +   +T     +            
Sbjct: 20  GRSKSEVLCRKHPKHRQSPGVCSICLRERLSQLSTSSRSASTTVASASSSSSLSSYSSHY 79

Query: 239 XXXXXXXXXXPVHYRVGSTSMKGPISFLIKDDDGLVRSKSMAFIARTRVDDMVVERRNKK 418
                     P+      +  KG  SFL+   + L +S+S+AF+ R R  D    +RN  
Sbjct: 80  SSSEASSCSSPMQRYRFDSDAKGSFSFLLSGKNMLTKSRSVAFVTRMRAGD--ASQRN-- 135

Query: 419 KKSSFWSRLIHGTSGKRKYVKEILKHSKTMKE 514
           KKS FWS+L+     + K  +E+L +S+T++E
Sbjct: 136 KKSGFWSKLLR---PRAKRTEEVLVYSRTVRE 164


>emb|CBI19200.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
 Frame = +2

Query: 74  GWSETDIRCKKHPKQRQSPGVCSACLRERLAQLTSRNNKITT-----AXXXXXXXXXXXX 238
           G S++++ C+KHPK RQSPGVCS CLRERL+QL++ +   +T     +            
Sbjct: 33  GRSKSEVLCRKHPKHRQSPGVCSICLRERLSQLSTSSRSASTTVASASSSSSLSSYSSHY 92

Query: 239 XXXXXXXXXXPVHYRVGSTSMKGPISFLIKDDDGLVRSKSMAFIARTRVDDMVVERRNKK 418
                     P+      +  KG  SFL+   + L +S+S+AF+ R R  D    +RN  
Sbjct: 93  SSSEASSCSSPMQRYRFDSDAKGSFSFLLSGKNMLTKSRSVAFVTRMRAGD--ASQRN-- 148

Query: 419 KKSSFWSRLIHGTSGKRKYVKEILKHSKTMKE 514
           KKS FWS+L+     + K  +E+L +S+T++E
Sbjct: 149 KKSGFWSKLLR---PRAKRTEEVLVYSRTVRE 177


>emb|CAN82663.1| hypothetical protein VITISV_004929 [Vitis vinifera]
          Length = 167

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
 Frame = +2

Query: 74  GWSETDIRCKKHPKQRQSPGVCSACLRERLAQLTSRNNKITT-----AXXXXXXXXXXXX 238
           G S++++ C+KHPK RQSPGVCS CLRERL+QL++ +   +T     +            
Sbjct: 13  GRSKSEVLCRKHPKHRQSPGVCSICLRERLSQLSTSSRSASTTVASASSSSSLSSYSSHY 72

Query: 239 XXXXXXXXXXPVHYRVGSTSMKGPISFLIKDDDGLVRSKSMAFIARTRVDDMVVERRNKK 418
                     P+      +  KG  SFL+   + L +S+S+AF+ R R  D       + 
Sbjct: 73  SSSEASSCSSPMQRYRFDSDAKGSFSFLLSGKNMLTKSRSVAFVTRMRXGD----AXQRN 128

Query: 419 KKSSFWSRLIHGTSGKRKYVKEILKHSKTMKE 514
           KKS FWS+L+     + K  +E+L +S+T++E
Sbjct: 129 KKSGFWSKLLR---PRAKRTEEVLVYSRTVRE 157


>ref|XP_002513964.1| conserved hypothetical protein [Ricinus communis]
           gi|223547050|gb|EEF48547.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
 Frame = +2

Query: 80  SETDIRCKKHPKQRQSPGVCSACLRERLAQL--TSRNNKITTA-XXXXXXXXXXXXXXXX 250
           ++ D RCKKHPK +QSPGVCS CL E+L+QL  TS +++ T++                 
Sbjct: 16  TKPDGRCKKHPKHKQSPGVCSICLSEKLSQLSTTSSSSRATSSMDSLSSSSSLSSYSSSS 75

Query: 251 XXXXXXPVH-YRVGSTSMKGPISFLIKDDDGLVRSKSMAFIARTRV--DDMVVERRNKKK 421
                 P+H YR G    KG  SFL+   + L RS+S+ FI+RT++  +   V+  +K K
Sbjct: 76  CSSCSSPMHRYRPGHEG-KGSFSFLLSGKNVLTRSRSLVFISRTKIRGNKEKVDNDHKIK 134

Query: 422 KSSFWSRLIHGTSGKRKYVKEILKHSKTMKE 514
           K+ FWS+L      K K ++E L HS+T++E
Sbjct: 135 KTGFWSKL--RLRPKNKGMEEGLVHSRTIEE 163


>ref|XP_002334816.1| predicted protein [Populus trichocarpa] gi|222874982|gb|EEF12113.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
 Frame = +2

Query: 74  GWSETDIRCKKHPKQRQSPGVCSACLRERLAQL--TSRNNKITTAXXXXXXXXXXXXXXX 247
           G S+ D +CKKHPK  Q PGVCS CL E+L+QL  ++  ++I +                
Sbjct: 12  GRSKRDRKCKKHPKHEQPPGVCSVCLSEKLSQLPTSATTSRIASLNTMDCSSSCSLSSYS 71

Query: 248 XXXXXXXPVHYRVGSTSMKGPISFLIKDDD-GLVRSKSMAFIARTRVDDMVVERRNKKKK 424
                  P+H+    T  KG         +  L +S+S+AF+ R    D      ++KKK
Sbjct: 72  SFSSYSSPMHHFQYPTHGKGSFPLFFNGKNMFLTKSRSLAFVPRRGNKDC-----HEKKK 126

Query: 425 SSFWSRLIHGTSGKRKYVKEILKHSKTMKE 514
             FWS+L+    GK+  V+E L HS+TM+E
Sbjct: 127 GGFWSKLLRLPKGKK--VEEGLVHSRTMRE 154


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