BLASTX nr result

ID: Coptis25_contig00002685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002685
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267...   142   1e-31
ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266...   137   3e-30
ref|XP_002514131.1| conserved hypothetical protein [Ricinus comm...   136   6e-30
ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209...   132   6e-29
emb|CBI27887.3| unnamed protein product [Vitis vinifera]              132   6e-29

>ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267009 [Vitis vinifera]
          Length = 117

 Score =  142 bits (357), Expect = 1e-31
 Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 5/116 (4%)
 Frame = -2

Query: 537 MEDFRSKSCGDDKMQIESY----TTSHGVHDFRSYSTSYASS-MPQVQMDNREMKFXXXX 373
           MED+RSKSC + +MQIESY        G+HD RSYS SYASS  P  QM           
Sbjct: 1   MEDYRSKSCREGRMQIESYYGGRPAPSGMHDLRSYSVSYASSSQPPTQMGKEVKIKKGKS 60

Query: 372 XXXXXXKNWSFNDPEIQRKKRVASYKVYAVEGKMKGSFRKSFRWLKDRYTQAVYGW 205
                 K+WSFNDPE+QRKKRVASYKVYAVEGKMKGSFRKSFRW+KD YTQ VYGW
Sbjct: 61  SFGPSSKSWSFNDPELQRKKRVASYKVYAVEGKMKGSFRKSFRWIKDTYTQVVYGW 116


>ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266443 [Vitis vinifera]
          Length = 116

 Score =  137 bits (344), Expect = 3e-30
 Identities = 72/117 (61%), Positives = 81/117 (69%), Gaps = 6/117 (5%)
 Frame = -2

Query: 537 MEDFRSKSCGDDKMQIESY------TTSHGVHDFRSYSTSYASSMPQVQMDNREMKFXXX 376
           MEDFRSKSCGD +MQ+ESY       TS G+ D R YS SYA   PQ QM N        
Sbjct: 1   MEDFRSKSCGDGRMQMESYHGGGGGPTSTGMQDLRCYSASYAYP-PQAQMGNDPKFKKGK 59

Query: 375 XXXXXXXKNWSFNDPEIQRKKRVASYKVYAVEGKMKGSFRKSFRWLKDRYTQAVYGW 205
                  K WSF+DPE+QRKKRVASYKVYAVEGKMKGS +KSFRWLKDRYT+ ++GW
Sbjct: 60  STNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVIHGW 116


>ref|XP_002514131.1| conserved hypothetical protein [Ricinus communis]
           gi|223546587|gb|EEF48085.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  136 bits (342), Expect = 6e-30
 Identities = 73/123 (59%), Positives = 86/123 (69%), Gaps = 12/123 (9%)
 Frame = -2

Query: 537 MEDFRSKSCGDDKMQIESY------TTSHGVH---DFRSYSTSYASSM--PQVQMDNREM 391
           MEDFRS SC D +MQI+SY       +S GV+   D R YS SYASS+   Q QM N ++
Sbjct: 1   MEDFRSNSCNDGRMQIQSYHGPSSLRSSSGVNSMQDLRCYSASYASSVHPTQTQMGNNDV 60

Query: 390 KFXXXXXXXXXXK-NWSFNDPEIQRKKRVASYKVYAVEGKMKGSFRKSFRWLKDRYTQAV 214
           KF            +WSFNDPE+QRKKRVASYKVY VEGK+KGSF+KSFRWLKDRYT+ V
Sbjct: 61  KFKKGKSTNGSVSKSWSFNDPELQRKKRVASYKVYTVEGKVKGSFKKSFRWLKDRYTRVV 120

Query: 213 YGW 205
           +GW
Sbjct: 121 HGW 123


>ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209615 [Cucumis sativus]
           gi|449480704|ref|XP_004155972.1| PREDICTED:
           uncharacterized LOC101209615 [Cucumis sativus]
          Length = 116

 Score =  132 bits (333), Expect = 6e-29
 Identities = 69/117 (58%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
 Frame = -2

Query: 537 MEDFRSKSCGDDKMQIESYTTSH----GVHDFRSYSTSYASSMPQVQMDNREMKFXXXXX 370
           MEDFRSKSC +++MQIE Y  +      + D RSYS SYASS+ Q Q  N+E+K      
Sbjct: 1   MEDFRSKSCREERMQIERYNENRIAPTNMQDLRSYSVSYASSVQQNQ-SNKEVKMKKGKS 59

Query: 369 XXXXXK-NWSFNDPEIQRKKRVASYKVYAVEGKMKGSFRKSFRWLKDRYTQAVYGWR 202
                  +WSF DPE+QRK RVA YKVYAVEGKMKGS RKSFRW+K+ YTQ VYGWR
Sbjct: 60  NMGSTSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTQVVYGWR 116


>emb|CBI27887.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  132 bits (333), Expect = 6e-29
 Identities = 71/116 (61%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
 Frame = -2

Query: 537 MEDFRSKSCGDDKMQIESY------TTSHGVHDFRSYSTSYASSMPQVQMDNREMKFXXX 376
           MEDFRSKSCGD +MQ+ESY       TS G+ D R YS SYA   PQ QM N        
Sbjct: 1   MEDFRSKSCGDGRMQMESYHGGGGGPTSTGMQDLRCYSASYAYP-PQAQMGNDPKFKKGK 59

Query: 375 XXXXXXXKNWSFNDPEIQRKKRVASYKVYAVEGKMKGSFRKSFRWLKDRYTQAVYG 208
                  K WSF+DPE+QRKKRVASYKVYAVEGKMKGS +KSFRWLKDRYT+ ++G
Sbjct: 60  STNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVIHG 115


Top