BLASTX nr result

ID: Coptis25_contig00002679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002679
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633323.1| PREDICTED: uncharacterized protein C167.05-l...   280   1e-73
ref|XP_002277051.1| PREDICTED: uncharacterized protein C167.05-l...   280   1e-73
emb|CAN75054.1| hypothetical protein VITISV_039450 [Vitis vinifera]   280   2e-73
gb|AFS65005.1| universal stress protein [Salvia miltiorrhiza]         263   2e-68
ref|XP_002892640.1| predicted protein [Arabidopsis lyrata subsp....   256   2e-66

>ref|XP_003633323.1| PREDICTED: uncharacterized protein C167.05-like isoform 4 [Vitis
           vinifera]
          Length = 254

 Score =  280 bits (716), Expect = 1e-73
 Identities = 151/198 (76%), Positives = 164/198 (82%), Gaps = 4/198 (2%)
 Frame = -1

Query: 586 PEKLPSPVKITQHQPSSPRFTLSPS-TPTSNHHRKIAIAVDLSDESAYAVKWAVQNYLRK 410
           P  LP PVK    QPSSPRF LS S TPT+  +R+IAIAVDLSDESAYAVKWAVQ+YLR 
Sbjct: 13  PSTLP-PVKAIHVQPSSPRFPLSSSNTPTAGANRRIAIAVDLSDESAYAVKWAVQHYLRP 71

Query: 409 GDQVILLHVRPTSVLYGADWGSIDT---THESSEQSQQKLENDFDTFTNTKANDIAQPLV 239
           GD VILLHVRPTSVLYGADWGSID    T  S+E+SQQKLE+DFDTFT TKA+D+AQPLV
Sbjct: 72  GDAVILLHVRPTSVLYGADWGSIDLAVDTDNSTEESQQKLEDDFDTFTTTKASDLAQPLV 131

Query: 238 KAEIPFKLHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGASGKRNSKGRLGSVSDYXXX 59
           +A+IPFK+HIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAS KR SKGRLGSVSDY   
Sbjct: 132 EAQIPFKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAS-KRTSKGRLGSVSDYCVH 190

Query: 58  XXXXXXXXVRFPDEKDGG 5
                   VR+PDEKDGG
Sbjct: 191 HCVCPVVVVRYPDEKDGG 208


>ref|XP_002277051.1| PREDICTED: uncharacterized protein C167.05-like isoform 1 [Vitis
           vinifera] gi|359485721|ref|XP_003633321.1| PREDICTED:
           uncharacterized protein C167.05-like isoform 2 [Vitis
           vinifera] gi|359485723|ref|XP_003633322.1| PREDICTED:
           uncharacterized protein C167.05-like isoform 3 [Vitis
           vinifera]
          Length = 249

 Score =  280 bits (716), Expect = 1e-73
 Identities = 151/198 (76%), Positives = 164/198 (82%), Gaps = 4/198 (2%)
 Frame = -1

Query: 586 PEKLPSPVKITQHQPSSPRFTLSPS-TPTSNHHRKIAIAVDLSDESAYAVKWAVQNYLRK 410
           P  LP PVK    QPSSPRF LS S TPT+  +R+IAIAVDLSDESAYAVKWAVQ+YLR 
Sbjct: 13  PSTLP-PVKAIHVQPSSPRFPLSSSNTPTAGANRRIAIAVDLSDESAYAVKWAVQHYLRP 71

Query: 409 GDQVILLHVRPTSVLYGADWGSIDT---THESSEQSQQKLENDFDTFTNTKANDIAQPLV 239
           GD VILLHVRPTSVLYGADWGSID    T  S+E+SQQKLE+DFDTFT TKA+D+AQPLV
Sbjct: 72  GDAVILLHVRPTSVLYGADWGSIDLAVDTDNSTEESQQKLEDDFDTFTTTKASDLAQPLV 131

Query: 238 KAEIPFKLHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGASGKRNSKGRLGSVSDYXXX 59
           +A+IPFK+HIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAS KR SKGRLGSVSDY   
Sbjct: 132 EAQIPFKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAS-KRTSKGRLGSVSDYCVH 190

Query: 58  XXXXXXXXVRFPDEKDGG 5
                   VR+PDEKDGG
Sbjct: 191 HCVCPVVVVRYPDEKDGG 208


>emb|CAN75054.1| hypothetical protein VITISV_039450 [Vitis vinifera]
          Length = 280

 Score =  280 bits (715), Expect = 2e-73
 Identities = 151/198 (76%), Positives = 164/198 (82%), Gaps = 4/198 (2%)
 Frame = -1

Query: 586 PEKLPSPVKITQHQPSSPRFTLSPS-TPTSNHHRKIAIAVDLSDESAYAVKWAVQNYLRK 410
           P  LP PVK    QPSSPRF LS S TPT+  +R+IAIAVDLSDESAYAVKWAVQ+YLR 
Sbjct: 13  PSTLP-PVKAIHVQPSSPRFPLSSSNTPTAGANRRIAIAVDLSDESAYAVKWAVQHYLRP 71

Query: 409 GDQVILLHVRPTSVLYGADWGSIDT---THESSEQSQQKLENDFDTFTNTKANDIAQPLV 239
           GD VILLHVRPTSVLYGADWGSID    T  S+E+SQQKLE+DFDTFT TKA+D+AQPLV
Sbjct: 72  GDAVILLHVRPTSVLYGADWGSIDLAVDTDNSTEESQQKLEDDFDTFTXTKASDLAQPLV 131

Query: 238 KAEIPFKLHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGASGKRNSKGRLGSVSDYXXX 59
           +A+IPFK+HIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAS KR SKGRLGSVSDY   
Sbjct: 132 EAQIPFKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAS-KRTSKGRLGSVSDYCVH 190

Query: 58  XXXXXXXXVRFPDEKDGG 5
                   VR+PDEKDGG
Sbjct: 191 HCVCPVVVVRYPDEKDGG 208


>gb|AFS65005.1| universal stress protein [Salvia miltiorrhiza]
          Length = 236

 Score =  263 bits (672), Expect = 2e-68
 Identities = 136/181 (75%), Positives = 153/181 (84%), Gaps = 1/181 (0%)
 Frame = -1

Query: 550 HQPSSPRFTLSPSTPTSNHHRKIAIAVDLSDESAYAVKWAVQNYLRKGDQVILLHVRPTS 371
           HQP+SPRF     TPT+   RK+AIAVDLSDESAYAVKWAVQNYLR GD VILLHVRPTS
Sbjct: 20  HQPASPRFP--SGTPTAGAQRKVAIAVDLSDESAYAVKWAVQNYLRPGDAVILLHVRPTS 77

Query: 370 VLYGADWGSIDTTHESS-EQSQQKLENDFDTFTNTKANDIAQPLVKAEIPFKLHIVKDHD 194
           VLYGADWG++D + +++ E+SQQKLE+DFD FT +KAND+AQPLV+A IPFK+HIVKDHD
Sbjct: 78  VLYGADWGAVDVSVDTADEKSQQKLEDDFDNFTTSKANDLAQPLVEASIPFKIHIVKDHD 137

Query: 193 MKERLCLEVERLGLSAVIMGSRGFGASGKRNSKGRLGSVSDYXXXXXXXXXXXVRFPDEK 14
           MKERLCLEVERLGLSAVIMGSRGFGAS +R+SKGRLGSVSDY           VRFPDEK
Sbjct: 138 MKERLCLEVERLGLSAVIMGSRGFGAS-RRSSKGRLGSVSDYCVHHCVCPVVVVRFPDEK 196

Query: 13  D 11
           D
Sbjct: 197 D 197


>ref|XP_002892640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338482|gb|EFH68899.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  256 bits (654), Expect = 2e-66
 Identities = 134/191 (70%), Positives = 156/191 (81%), Gaps = 3/191 (1%)
 Frame = -1

Query: 571 SPVKITQHQPSSPRFTLSPSTPTSNHHRKIAIAVDLSDESAYAVKWAVQNYLRKGDQVIL 392
           SP  +T  QPSSPRF +   TPT+   RKI IAVDLSDESAYAV+WAVQNYLR GD V+L
Sbjct: 14  SPTVVTV-QPSSPRFPIG--TPTAGAQRKIGIAVDLSDESAYAVQWAVQNYLRSGDAVVL 70

Query: 391 LHVRPTSVLYGADWGSIDTTHE---SSEQSQQKLENDFDTFTNTKANDIAQPLVKAEIPF 221
           LHV+PTSVLYGADWG+ID + +    +E+SQ+KLE+DFD FTN KA+D+AQPLV+A+IPF
Sbjct: 71  LHVQPTSVLYGADWGAIDLSPQWDPENEESQRKLEDDFDIFTNKKASDVAQPLVEADIPF 130

Query: 220 KLHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGASGKRNSKGRLGSVSDYXXXXXXXXX 41
           K+HIVKDHDMKERLCLEVERLGLS +IMGSRGFGA+ KR+SKGRLGSVSDY         
Sbjct: 131 KIHIVKDHDMKERLCLEVERLGLSTLIMGSRGFGAT-KRSSKGRLGSVSDYSVHHCACPV 189

Query: 40  XXVRFPDEKDG 8
             VRFPD+KDG
Sbjct: 190 VVVRFPDDKDG 200


Top