BLASTX nr result

ID: Coptis25_contig00002678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002678
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...    70   1e-14
ref|XP_002324138.1| predicted protein [Populus trichocarpa] gi|2...    68   5e-14
ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycin...    72   8e-14
ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...    72   8e-14
ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...    65   1e-13

>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
           gi|223544718|gb|EEF46234.1| groes chaperonin, putative
           [Ricinus communis]
          Length = 253

 Score = 70.1 bits (170), Expect(2) = 1e-14
 Identities = 32/42 (76%), Positives = 40/42 (95%)
 Frame = -1

Query: 625 ILLPFTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 500
           ILLP +A++KPQGGEVVAVGEG+T+GKN L+I+VKTGAQ+VY
Sbjct: 84  ILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVKTGAQVVY 125



 Score = 36.6 bits (83), Expect(2) = 1e-14
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -2

Query: 498 GT*LEFYGSTHLLLKEDDIVGL 433
           GT +EF GS+HL+LKEDDIVG+
Sbjct: 130 GTEVEFNGSSHLILKEDDIVGV 151


>ref|XP_002324138.1| predicted protein [Populus trichocarpa] gi|222865572|gb|EEF02703.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 67.8 bits (164), Expect(2) = 5e-14
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -1

Query: 625 ILLPFTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 500
           ILLP +A+SKPQGGEVVAVGEGKT+GK  L+I+VKTG Q+VY
Sbjct: 89  ILLPSSAQSKPQGGEVVAVGEGKTIGKAKLDISVKTGTQVVY 130



 Score = 36.6 bits (83), Expect(2) = 5e-14
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -2

Query: 498 GT*LEFYGSTHLLLKEDDIVGL 433
           GT +EF GS+HL+LKEDDIVG+
Sbjct: 135 GTEVEFDGSSHLILKEDDIVGI 156


>ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycine max]
           gi|255645102|gb|ACU23050.1| unknown [Glycine max]
          Length = 253

 Score = 72.4 bits (176), Expect(2) = 8e-14
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -1

Query: 625 ILLPFTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 500
           ILLP TA++KPQGGEVVAVGEGKT+GKN +EI+VKTGAQ+VY
Sbjct: 84  ILLPSTAQTKPQGGEVVAVGEGKTIGKNNVEISVKTGAQVVY 125



 Score = 31.2 bits (69), Expect(2) = 8e-14
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = -2

Query: 498 GT*LEFYGSTHLLLKEDDIVGL 433
           GT ++F G+ HL++K+DDIVG+
Sbjct: 130 GTEVDFDGTKHLIVKDDDIVGI 151


>ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max]
           gi|255647873|gb|ACU24395.1| unknown [Glycine max]
          Length = 253

 Score = 72.0 bits (175), Expect(2) = 8e-14
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -1

Query: 625 ILLPFTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 500
           ILLP TA++KPQGGEVVAVGEGKT+GKN +EI+VKTGAQ+VY
Sbjct: 84  ILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEISVKTGAQVVY 125



 Score = 31.6 bits (70), Expect(2) = 8e-14
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = -2

Query: 498 GT*LEFYGSTHLLLKEDDIVGL 433
           GT ++F G+ HL++K+DDIVG+
Sbjct: 130 GTEVDFNGTKHLIVKDDDIVGI 151


>ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
           sativus] gi|449521557|ref|XP_004167796.1| PREDICTED: 20
           kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
           sativus]
          Length = 256

 Score = 65.5 bits (158), Expect(2) = 1e-13
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -1

Query: 625 ILLPFTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 500
           ILLP TA+++PQGGEVVAVGEGKT+G   +E +VKTGAQ+VY
Sbjct: 87  ILLPSTAQTRPQGGEVVAVGEGKTIGNTKVEASVKTGAQVVY 128



 Score = 37.7 bits (86), Expect(2) = 1e-13
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -2

Query: 498 GT*LEFYGSTHLLLKEDDIVGL 433
           GT LEF GS HL+LKEDDIVG+
Sbjct: 133 GTELEFNGSNHLILKEDDIVGI 154


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