BLASTX nr result
ID: Coptis25_contig00002643
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002643 (1210 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis... 231 3e-58 emb|CAN64562.1| hypothetical protein VITISV_038233 [Vitis vinifera] 231 3e-58 ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi... 231 4e-58 ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG3... 226 1e-56 ref|XP_003574461.1| PREDICTED: tRNA modification GTPase MnmE-lik... 223 6e-56 >ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis] gi|223546964|gb|EEF48461.1| gtpase mss1/trme, putative [Ricinus communis] Length = 557 Score = 231 bits (589), Expect = 3e-58 Identities = 115/162 (70%), Positives = 136/162 (83%) Frame = +2 Query: 14 QSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSEAVAMGAD 193 +SE+AIVTEIAGTTRDVVEA + V GIP+TLLDTAGIRET+DIVEKIGVERSEAVAMGAD Sbjct: 332 KSERAIVTEIAGTTRDVVEAGVTVGGIPVTLLDTAGIRETDDIVEKIGVERSEAVAMGAD 391 Query: 194 VIIMTVSAMDGWTSDDAELLERIQVNQEITGSSAPMILVINKIDCAPSESVETLKRVVTP 373 VII+T+SA DGWTS+D+ELL RI+ N++ GSS P++L INKID APS S+E + R Sbjct: 392 VIILTISAFDGWTSEDSELLSRIESNKKSVGSSTPVVLAINKIDTAPSLSMEWIGRYSKA 451 Query: 374 FNKHVLTCAVNGQGIPDLESALIEIAGLDRIPAGGRRWAVNQ 499 F+KHV TCAV GQGI +LE A+ EI GL+RIP GGR+W VNQ Sbjct: 452 FSKHVFTCAVTGQGIKELEMAISEIVGLNRIPTGGRKWTVNQ 493 Score = 95.1 bits (235), Expect = 3e-17 Identities = 49/61 (80%), Positives = 53/61 (86%) Frame = +3 Query: 1026 TSRQRQFEQLVRTKEAQMRLKSSIEEEMPLDFWTIDLREAALALAHISGEDISEEVLSNI 1205 T QRQ EQL+RTKEA RLKSSI++EMPLDFWTIDLR+AALAL ISGE ISEEVLSNI Sbjct: 490 TVNQRQCEQLMRTKEALARLKSSIKDEMPLDFWTIDLRDAALALGQISGEGISEEVLSNI 549 Query: 1206 F 1208 F Sbjct: 550 F 550 >emb|CAN64562.1| hypothetical protein VITISV_038233 [Vitis vinifera] Length = 434 Score = 231 bits (589), Expect = 3e-58 Identities = 116/162 (71%), Positives = 136/162 (83%) Frame = +2 Query: 14 QSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSEAVAMGAD 193 +SE+AIVTEIAGTTRDVVEAS+++HGIP+TLLDTAGIRET+DIVEKIGVERSEAVA+ AD Sbjct: 184 KSERAIVTEIAGTTRDVVEASVSIHGIPVTLLDTAGIRETDDIVEKIGVERSEAVAISAD 243 Query: 194 VIIMTVSAMDGWTSDDAELLERIQVNQEITGSSAPMILVINKIDCAPSESVETLKRVVTP 373 VIIMT+SA+DGWTS D +L RI N++ SS P+ILV+NKIDCAPS E L Sbjct: 244 VIIMTISALDGWTSQDTKLFNRIISNKKFVESSTPVILVVNKIDCAPSACTE-LFMXGNS 302 Query: 374 FNKHVLTCAVNGQGIPDLESALIEIAGLDRIPAGGRRWAVNQ 499 F+KH+ TCAV GQGI DLESA+IEI GL++IPAGGRRW VNQ Sbjct: 303 FSKHIFTCAVTGQGISDLESAIIEIVGLNKIPAGGRRWTVNQ 344 Score = 98.6 bits (244), Expect = 3e-18 Identities = 52/61 (85%), Positives = 53/61 (86%) Frame = +3 Query: 1026 TSRQRQFEQLVRTKEAQMRLKSSIEEEMPLDFWTIDLREAALALAHISGEDISEEVLSNI 1205 T QRQ EQLVRTKEA RL SSIEEEMPLDFWTIDLREAALAL ISGEDISEEVL+NI Sbjct: 341 TVNQRQCEQLVRTKEALARLISSIEEEMPLDFWTIDLREAALALGQISGEDISEEVLTNI 400 Query: 1206 F 1208 F Sbjct: 401 F 401 >ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera] gi|302141924|emb|CBI19127.3| unnamed protein product [Vitis vinifera] Length = 571 Score = 231 bits (588), Expect = 4e-58 Identities = 116/162 (71%), Positives = 136/162 (83%) Frame = +2 Query: 14 QSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSEAVAMGAD 193 +SE+AIVTEIAGTTRDVVEAS+++HGIP+TLLDTAGIRET+DIVEKIGVERSEAVA+ AD Sbjct: 347 KSERAIVTEIAGTTRDVVEASVSIHGIPVTLLDTAGIRETDDIVEKIGVERSEAVAISAD 406 Query: 194 VIIMTVSAMDGWTSDDAELLERIQVNQEITGSSAPMILVINKIDCAPSESVETLKRVVTP 373 VIIMT+SA+DGWTS D +L RI N++ SS P+ILV+NKIDCAPS E L Sbjct: 407 VIIMTISALDGWTSQDTKLFNRIISNKKFVESSTPVILVVNKIDCAPSACTE-LFMEGNS 465 Query: 374 FNKHVLTCAVNGQGIPDLESALIEIAGLDRIPAGGRRWAVNQ 499 F+KH+ TCAV GQGI DLESA+IEI GL++IPAGGRRW VNQ Sbjct: 466 FSKHIFTCAVTGQGISDLESAIIEIVGLNKIPAGGRRWTVNQ 507 Score = 98.6 bits (244), Expect = 3e-18 Identities = 52/61 (85%), Positives = 53/61 (86%) Frame = +3 Query: 1026 TSRQRQFEQLVRTKEAQMRLKSSIEEEMPLDFWTIDLREAALALAHISGEDISEEVLSNI 1205 T QRQ EQLVRTKEA RL SSIEEEMPLDFWTIDLREAALAL ISGEDISEEVL+NI Sbjct: 504 TVNQRQCEQLVRTKEALARLISSIEEEMPLDFWTIDLREAALALGQISGEDISEEVLTNI 563 Query: 1206 F 1208 F Sbjct: 564 F 564 >ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG35370.1| tRNA modification GTPase trmE [Zea mays] Length = 546 Score = 226 bits (575), Expect = 1e-56 Identities = 104/162 (64%), Positives = 136/162 (83%) Frame = +2 Query: 14 QSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSEAVAMGAD 193 +SE+AIVTEIAGTTRDVVEA++++HG+P+TLLDTAGIRET+D+VEKIGV+RSEA AMGAD Sbjct: 321 KSERAIVTEIAGTTRDVVEANVSIHGVPVTLLDTAGIRETDDVVEKIGVKRSEAAAMGAD 380 Query: 194 VIIMTVSAMDGWTSDDAELLERIQVNQEITGSSAPMILVINKIDCAPSESVETLKRVVTP 373 +I+M +SA+DGWT DD +L+E + VN++ +GS+ PM+LVINK+DCAP E K+ Sbjct: 381 LIVMAISAVDGWTDDDTKLMEHVSVNRKSSGSAVPMVLVINKVDCAPFVPGEQFKQFSGL 440 Query: 374 FNKHVLTCAVNGQGIPDLESALIEIAGLDRIPAGGRRWAVNQ 499 F KHV TCAV G+GI DLESA+IE+ G++ +P+ GRRW VNQ Sbjct: 441 FRKHVQTCAVTGKGISDLESAVIEVRGIEHVPSEGRRWTVNQ 482 Score = 96.3 bits (238), Expect = 1e-17 Identities = 48/61 (78%), Positives = 55/61 (90%) Frame = +3 Query: 1026 TSRQRQFEQLVRTKEAQMRLKSSIEEEMPLDFWTIDLREAALALAHISGEDISEEVLSNI 1205 T QRQFEQL+RTKEA RL+SSI E++P+DFWT+DLREAALALA ISGEDISEEVLS+I Sbjct: 479 TVNQRQFEQLLRTKEAFARLESSINEQLPMDFWTVDLREAALALATISGEDISEEVLSSI 538 Query: 1206 F 1208 F Sbjct: 539 F 539 >ref|XP_003574461.1| PREDICTED: tRNA modification GTPase MnmE-like [Brachypodium distachyon] Length = 543 Score = 223 bits (569), Expect = 6e-56 Identities = 105/162 (64%), Positives = 136/162 (83%) Frame = +2 Query: 14 QSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSEAVAMGAD 193 +SE+AIVTEIAGTTRDVVEA++++HGIP+TLLDTAGIRET+DIVEKIGVERSEA A+GAD Sbjct: 318 KSERAIVTEIAGTTRDVVEANVSIHGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGAD 377 Query: 194 VIIMTVSAMDGWTSDDAELLERIQVNQEITGSSAPMILVINKIDCAPSESVETLKRVVTP 373 ++IMT+SA+DGWT DD +L+E + +++++GS+ PM+LVINK+DC P S E ++ Sbjct: 378 MVIMTISAVDGWTEDDTKLIEHVMNDKKLSGSAVPMVLVINKVDCKPFVSGEQFEKFSGI 437 Query: 374 FNKHVLTCAVNGQGIPDLESALIEIAGLDRIPAGGRRWAVNQ 499 F KHV TCAV G+GI +LE A+IE+ GL+ IP GGRRW VNQ Sbjct: 438 FRKHVHTCAVTGKGISELERAVIEVRGLEPIPPGGRRWTVNQ 479 Score = 91.7 bits (226), Expect = 3e-16 Identities = 46/61 (75%), Positives = 54/61 (88%) Frame = +3 Query: 1026 TSRQRQFEQLVRTKEAQMRLKSSIEEEMPLDFWTIDLREAALALAHISGEDISEEVLSNI 1205 T QRQ EQL+RT+EA RL+SSI E++P+DFWTIDLREAALALA I+GEDISEEVLS+I Sbjct: 476 TVNQRQLEQLLRTQEAFKRLESSINEQLPMDFWTIDLREAALALATINGEDISEEVLSSI 535 Query: 1206 F 1208 F Sbjct: 536 F 536