BLASTX nr result

ID: Coptis25_contig00002641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002641
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vi...   146   4e-33
ref|XP_004170126.1| PREDICTED: LOW QUALITY PROTEIN: light-regula...   138   1e-30
ref|XP_004140555.1| PREDICTED: light-regulated protein-like [Cuc...   137   2e-30
gb|AFK49621.1| unknown [Lotus japonicus]                              131   1e-28
ref|XP_002275869.1| PREDICTED: light-regulated protein [Vitis vi...   131   2e-28

>ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vinifera]
           gi|296088179|emb|CBI35671.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  146 bits (369), Expect = 4e-33
 Identities = 76/139 (54%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
 Frame = +1

Query: 154 MQAALCFAQXXXXXXXXXXXXRWLRSP-SKIETILLRRHPASTKVMAIPSENSTVDYTSK 330
           MQAALCF +              L++P SK++T       A++K+   PS   TVDY+S 
Sbjct: 1   MQAALCFPRSTLPLLTPTKPFSSLKNPISKLQTSPFPPLRATSKLQETPS---TVDYSST 57

Query: 331 TSVFPAEACETIGGEACNAEIYPETTLKPEDTSIKGKTTQESVDREYLEYEDQKTVFPGE 510
           TSVFPAEACE +GGEAC+AE+YPE  LK E  +   ++  E VDREYLEY   KTVFPGE
Sbjct: 58  TSVFPAEACEVVGGEACDAEMYPEVKLKAEAGNPPARSATEGVDREYLEYNSPKTVFPGE 117

Query: 511 ACDDLGGEFCQPEYQKGVY 567
           ACDDLGGEFC+PEYQ+GV+
Sbjct: 118 ACDDLGGEFCEPEYQEGVF 136


>ref|XP_004170126.1| PREDICTED: LOW QUALITY PROTEIN: light-regulated protein-like
           [Cucumis sativus]
          Length = 137

 Score =  138 bits (347), Expect = 1e-30
 Identities = 63/96 (65%), Positives = 76/96 (79%)
 Frame = +1

Query: 280 KVMAIPSENSTVDYTSKTSVFPAEACETIGGEACNAEIYPETTLKPEDTSIKGKTTQESV 459
           K  A+  + STVDY+S +SVFPAEAC+T+GGEAC+ E+YPE  LKPE  + KG +  E V
Sbjct: 44  KASAVGQDPSTVDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPE--AXKGNSVTEPV 101

Query: 460 DREYLEYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 567
           +REYL+Y+  KTVFP EACDDLGGEFC PEYQKGVY
Sbjct: 102 EREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137


>ref|XP_004140555.1| PREDICTED: light-regulated protein-like [Cucumis sativus]
           gi|493636|dbj|BAA06153.1| CR9 [Cucumis sativus]
           gi|322505875|emb|CBZ13178.1| putative
           cytokinin-repressed protein [Cucumis sativus]
           gi|746031|prf||2016504A cytokinin-repressed protein CR9
          Length = 137

 Score =  137 bits (345), Expect = 2e-30
 Identities = 63/96 (65%), Positives = 76/96 (79%)
 Frame = +1

Query: 280 KVMAIPSENSTVDYTSKTSVFPAEACETIGGEACNAEIYPETTLKPEDTSIKGKTTQESV 459
           K  A+  + STVDY+S +SVFPAEAC+T+GGEAC+ E+YPE  LKPE  + KG +  E V
Sbjct: 44  KASAVGQDPSTVDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPE--AKKGNSVTEPV 101

Query: 460 DREYLEYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 567
           +REYL+Y+  KTVFP EACDDLGGEFC PEYQKGVY
Sbjct: 102 EREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137


>gb|AFK49621.1| unknown [Lotus japonicus]
          Length = 140

 Score =  131 bits (330), Expect = 1e-28
 Identities = 65/112 (58%), Positives = 77/112 (68%)
 Frame = +1

Query: 232 PSKIETILLRRHPASTKVMAIPSENSTVDYTSKTSVFPAEACETIGGEACNAEIYPETTL 411
           P+K+   L      + KV  +  + STVDYTS  SVFP EACETIGG+AC AE+YPE  L
Sbjct: 29  PAKLTGSLAPPRFTAIKVATVNYDTSTVDYTSAFSVFPVEACETIGGDACLAEMYPEVKL 88

Query: 412 KPEDTSIKGKTTQESVDREYLEYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 567
           KPE  +   +   E+V+REYLEY D KTVF  EACDDLGG FC+ EYQKGVY
Sbjct: 89  KPEARNNTPRDASENVEREYLEYNDPKTVFQAEACDDLGGIFCELEYQKGVY 140


>ref|XP_002275869.1| PREDICTED: light-regulated protein [Vitis vinifera]
           gi|296082275|emb|CBI21280.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  131 bits (329), Expect = 2e-28
 Identities = 72/139 (51%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
 Frame = +1

Query: 154 MQAALCFAQXXXXXXXXXXXXRWLRS-PSKIETILLRRHPASTKVMAIPSENSTVDYTSK 330
           MQAALCFA                 S P K+ T L  R P   K  A   ++STVDY S 
Sbjct: 1   MQAALCFAPTLLPLTPSRNFATPASSSPPKLATSLTSRRPP-IKAAAAAYDSSTVDYNSM 59

Query: 331 TSVFPAEACETIGGEACNAEIYPETTLKPEDTSIKGKTTQESVDREYLEYEDQKTVFPGE 510
           TSVFPAEAC+ IGGEAC A+ YPE  LK E  +   +T  E  +R+Y EY D KTVF  E
Sbjct: 60  TSVFPAEACDVIGGEACLADCYPEVRLKQEARNRAARTASEVTERDYYEYNDAKTVFRAE 119

Query: 511 ACDDLGGEFCQPEYQKGVY 567
           ACDDLGG FC+ EYQ+GVY
Sbjct: 120 ACDDLGGLFCEREYQRGVY 138


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