BLASTX nr result

ID: Coptis25_contig00002633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002633
         (1204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541492.1| PREDICTED: uncharacterized membrane protein ...   113   1e-22
ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
ref|XP_003549714.1| PREDICTED: uncharacterized membrane protein ...   111   3e-22
ref|XP_003533860.1| PREDICTED: uncharacterized membrane protein ...   111   4e-22
ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251...   110   5e-22

>ref|XP_003541492.1| PREDICTED: uncharacterized membrane protein YMR155W-like [Glycine
           max]
          Length = 571

 Score =  113 bits (282), Expect = 1e-22
 Identities = 60/124 (48%), Positives = 83/124 (66%), Gaps = 13/124 (10%)
 Frame = -2

Query: 441 VKVDLRLLYIVFFSGVGSGITVLKNLTRVGIAQGSSDTSMLLSIYSFYNFVGRLVGSVIY 262
           VK D  LL+ V+F GVG+G+TVL NL ++GIAQG  DT+ LLS++SF+NFVGRL G V+ 
Sbjct: 346 VKADYWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTNLLSLFSFFNFVGRLGGGVVS 405

Query: 261 EHFVRSNTIP*TIWMKCTQLIGL------------NLLP-VCLNSL*WGTQFSVG*PILP 121
           E+FVR+NTIP TIWM CTQ+I +             L P + +  + +G QFS+   ++P
Sbjct: 406 EYFVRTNTIPRTIWMTCTQIIMIFSYLVFAYAIKGTLYPAIAILGICYGVQFSI---VIP 462

Query: 120 PLDE 109
            + E
Sbjct: 463 TVSE 466


>ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  112 bits (281), Expect = 1e-22
 Identities = 59/122 (48%), Positives = 78/122 (63%), Gaps = 13/122 (10%)
 Frame = -2

Query: 441 VKVDLRLLYIVFFSGVGSGITVLKNLTRVGIAQGSSDTSMLLSIYSFYNFVGRLVGSVIY 262
           +K D  LL+ V+F GVGSG+TVL NL ++GIAQG  DT++LLS++SF NFVGRL G ++ 
Sbjct: 347 IKADFWLLFFVYFVGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGIVS 406

Query: 261 EHFVRSNTIP*TIWMKCTQLI-------------GLNLLPVCLNSL*WGTQFSVG*PILP 121
           EHFVRS TIP TIWM CTQ++             G+      L  + +G QFS+  P + 
Sbjct: 407 EHFVRSKTIPRTIWMTCTQVMMIITYLLFASAIDGILYAATALLGICYGVQFSIMIPTVS 466

Query: 120 PL 115
            L
Sbjct: 467 EL 468


>ref|XP_003549714.1| PREDICTED: uncharacterized membrane protein YMR155W-like [Glycine
           max]
          Length = 571

 Score =  111 bits (278), Expect = 3e-22
 Identities = 58/124 (46%), Positives = 82/124 (66%), Gaps = 13/124 (10%)
 Frame = -2

Query: 441 VKVDLRLLYIVFFSGVGSGITVLKNLTRVGIAQGSSDTSMLLSIYSFYNFVGRLVGSVIY 262
           VK D  LL+ V+F GVG+G+TVL NL ++GIAQG  DT++LLS++SF+NFVGRL G V+ 
Sbjct: 346 VKADYWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTILLSLFSFFNFVGRLGGGVVS 405

Query: 261 EHFVRSNTIP*TIWMKCTQLIGLNLL-------------PVCLNSL*WGTQFSVG*PILP 121
           E+FVR+ TIP TIWM CTQ+I + L               + +  + +G QFS+   ++P
Sbjct: 406 EYFVRTKTIPRTIWMTCTQIIMIFLYLVFAYAIKGTLYPAIAVLGICYGVQFSI---VIP 462

Query: 120 PLDE 109
            + E
Sbjct: 463 TVSE 466


>ref|XP_003533860.1| PREDICTED: uncharacterized membrane protein YMR155W-like [Glycine
           max]
          Length = 569

 Score =  111 bits (277), Expect = 4e-22
 Identities = 53/83 (63%), Positives = 64/83 (77%)
 Frame = -2

Query: 441 VKVDLRLLYIVFFSGVGSGITVLKNLTRVGIAQGSSDTSMLLSIYSFYNFVGRLVGSVIY 262
           VK D  LL+ VFF GVG+G+TVL NL ++GIAQG  DT+ LLSI+SF NFVGRL G V+ 
Sbjct: 342 VKADFWLLFFVFFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVS 401

Query: 261 EHFVRSNTIP*TIWMKCTQLIGL 193
           EHFVR+ TIP T+WM CTQ + L
Sbjct: 402 EHFVRTKTIPRTVWMTCTQTLML 424


>ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera]
          Length = 573

 Score =  110 bits (276), Expect = 5e-22
 Identities = 59/122 (48%), Positives = 78/122 (63%), Gaps = 13/122 (10%)
 Frame = -2

Query: 441 VKVDLRLLYIVFFSGVGSGITVLKNLTRVGIAQGSSDTSMLLSIYSFYNFVGRLVGSVIY 262
           VKVD  LL++V+F+GVGSG+TVL NL ++GIAQG  +T+MLL ++SF NF+GRL G  + 
Sbjct: 348 VKVDFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHNTTMLLCLFSFCNFLGRLGGGAVS 407

Query: 261 EHFVRSNTIP*TIWMKCTQLI-------------GLNLLPVCLNSL*WGTQFSVG*PILP 121
           EHF+RS TIP TIWM CTQ+I             G       L  + +G QFS+  P + 
Sbjct: 408 EHFLRSKTIPRTIWMTCTQVIMVITYLLFASALDGTLYAATALLGICYGVQFSIMVPTVS 467

Query: 120 PL 115
            L
Sbjct: 468 EL 469


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