BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002619
         (1701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA ...   545   e-152
ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communi...   543   e-152
emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]   541   e-151
gb|AEI55401.1| TTG1 [Rubus idaeus]                                    538   e-150
gb|AFY23208.1| transparent testa glabra 1 [Rosa rugosa]               537   e-150

>ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform 1 [Vitis
            vinifera] gi|359490757|ref|XP_003634158.1| PREDICTED:
            protein TRANSPARENT TESTA GLABRA 1 isoform 2 [Vitis
            vinifera] gi|113707434|gb|ABF66625.2| WD-repeat 1 [Vitis
            vinifera]
          Length = 336

 Score =  545 bits (1403), Expect = e-152
 Identities = 267/347 (76%), Positives = 298/347 (85%), Gaps = 3/347 (0%)
 Frame = -1

Query: 1488 SNSGQERSENLFTYDSPYPIYAMAFSSCDDNSKSQH---RIATGSFLEDLNNKVDILSFD 1318
            S     RSEN  TY+SPYP+Y+MA SS      +QH   RIA GSF+E+L+N+VDI+SFD
Sbjct: 5    SQESHLRSENCVTYESPYPLYSMAISS-----STQHHHPRIAIGSFIEELSNRVDIVSFD 59

Query: 1317 EETLAFKTHPNLSFDHPYPPTKLMFHPSKPNSPDLLASSGDFLRLWEIKEGGXXXXXXXX 1138
            E+ LA +THP+LSFDHPYPPTKLMFHP+   SPD LASSG++LRLWE+++          
Sbjct: 60   EDALAIRTHPSLSFDHPYPPTKLMFHPNSRTSPDHLASSGEYLRLWEVRDNS-------- 111

Query: 1137 XSVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQLIAH 958
              +   S+LNNSKTSEFCAPLTSFDWN V+PRRIGTSSIDTTCTIWDVERGVVETQLIAH
Sbjct: 112  --IQPLSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAH 169

Query: 957  DKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQDLRY 778
            DKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD+RY
Sbjct: 170  DKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDVRY 229

Query: 777  MATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALIWEL 598
            MATILMDSNK+VILDIRSPTMPVAEL+RHRASVNAI+WAPQS RHICS GDD+QALIWEL
Sbjct: 230  MATILMDSNKIVILDIRSPTMPVAELERHRASVNAISWAPQSSRHICSGGDDSQALIWEL 289

Query: 597  PTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 457
            PT+AGPNGIDPM  Y A SEINQLQWS  QP+WIAIAF++K+QLLKV
Sbjct: 290  PTLAGPNGIDPMSVYLASSEINQLQWSAAQPEWIAIAFSNKLQLLKV 336


>ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communis]
            gi|223529537|gb|EEF31490.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 342

 Score =  543 bits (1398), Expect = e-152
 Identities = 271/350 (77%), Positives = 300/350 (85%), Gaps = 7/350 (2%)
 Frame = -1

Query: 1485 NSGQE---RSENLFTYDSPYPIYAMAFSSCDDNSKSQH-RIATGSFLEDLNNKVDILSFD 1318
            NS QE   +SEN  TYDSPYP+YAMAFSS   +S + H RIA GSF+ED +N+VDILS +
Sbjct: 3    NSTQESHLKSENSITYDSPYPLYAMAFSSSPSSSSTHHHRIAVGSFIEDYSNRVDILSLN 62

Query: 1317 EETLAFKTHPNLSFDHPYPPTKLMFHPS---KPNSPDLLASSGDFLRLWEIKEGGXXXXX 1147
             ETL+FKTHP++SFDHPYPPTKLMFHP+   + +S DLLASSGD+LRLWEI+        
Sbjct: 63   TETLSFKTHPSVSFDHPYPPTKLMFHPASSLRKSSSDLLASSGDYLRLWEIR-------- 114

Query: 1146 XXXXSVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQL 967
                 V   S+LNNSK+SEFCAPLTSFDWN ++P+RIGT SIDTTCTIWD+E+G VETQL
Sbjct: 115  --GDVVEPLSVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGCVETQL 172

Query: 966  IAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQD 787
            IAHDKEVYD+AWGEA VFASVSADGSVRIFDLRDKEHSTI+YESP PDTPLLRLAWNKQD
Sbjct: 173  IAHDKEVYDMAWGEARVFASVSADGSVRIFDLRDKEHSTILYESPRPDTPLLRLAWNKQD 232

Query: 786  LRYMATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALI 607
            LRYMATILMDSNKVVILDIRSPT PVAEL+RHRASVNAIAWAPQS RHICSAGDDAQALI
Sbjct: 233  LRYMATILMDSNKVVILDIRSPTTPVAELERHRASVNAIAWAPQSCRHICSAGDDAQALI 292

Query: 606  WELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 457
            W+LPTVAGPNGIDPM  YSA SEINQLQWS  QPDWIAIAF++KMQ LKV
Sbjct: 293  WDLPTVAGPNGIDPMSMYSASSEINQLQWSAAQPDWIAIAFSNKMQFLKV 342


>emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]
          Length = 336

 Score =  541 bits (1393), Expect = e-151
 Identities = 265/341 (77%), Positives = 294/341 (86%), Gaps = 3/341 (0%)
 Frame = -1

Query: 1470 RSENLFTYDSPYPIYAMAFSSCDDNSKSQH---RIATGSFLEDLNNKVDILSFDEETLAF 1300
            RSEN  TY+SPYP+Y+MA SS      +QH   RIA GSF+E+  N+VDI+SFDE+ LA 
Sbjct: 11   RSENCVTYESPYPLYSMAISS-----STQHHHPRIAIGSFIEEXXNRVDIVSFDEDALAI 65

Query: 1299 KTHPNLSFDHPYPPTKLMFHPSKPNSPDLLASSGDFLRLWEIKEGGXXXXXXXXXSVVQK 1120
            +THP LSFDHPYPPTKLMFHP+   SPD LASSG++LRLWE+++            +   
Sbjct: 66   RTHPXLSFDHPYPPTKLMFHPNSRTSPDHLASSGEYLRLWEVRDNS----------IQPL 115

Query: 1119 SLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYD 940
            S+LNNSKTSEFCAPLTSFDWN V+PRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYD
Sbjct: 116  SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYD 175

Query: 939  IAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQDLRYMATILM 760
            IAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD+RYMATILM
Sbjct: 176  IAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDVRYMATILM 235

Query: 759  DSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALIWELPTVAGP 580
            DSNK+VILDIRSPTMPVAEL+RHRASVNAI+WAPQS RHICS GDD+QALIWELPT+AGP
Sbjct: 236  DSNKIVILDIRSPTMPVAELERHRASVNAISWAPQSSRHICSGGDDSQALIWELPTLAGP 295

Query: 579  NGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 457
            NGIDPM  Y A SEINQLQWS  QP+WIAIAF++K+QLLKV
Sbjct: 296  NGIDPMSVYLASSEINQLQWSAAQPEWIAIAFSNKLQLLKV 336


>gb|AEI55401.1| TTG1 [Rubus idaeus]
          Length = 344

 Score =  538 bits (1387), Expect = e-150
 Identities = 270/350 (77%), Positives = 294/350 (84%), Gaps = 7/350 (2%)
 Frame = -1

Query: 1485 NSGQERS---ENLFTYDSPYPIYAMAFSSCDDNSKSQHRIATGSFLEDLNNKVDILSFDE 1315
            NS QE     EN  TY+SPYP+YAMAFSS        HRIA GSF+E+ +N+VDILSFD 
Sbjct: 3    NSTQESHLGPENSVTYESPYPLYAMAFSSPRTRHHHHHRIAVGSFIEEFSNRVDILSFDP 62

Query: 1314 ETLAFKTHPNLSFDHPYPPTKLMFHPSKPNS----PDLLASSGDFLRLWEIKEGGXXXXX 1147
            +TL  K +P LSFDHPYPPTKLMFHP+ PN+     D+LASSGD+LRLWE+K+       
Sbjct: 63   DTLTLKPNPALSFDHPYPPTKLMFHPN-PNTLHKTNDILASSGDYLRLWEVKDSSVDRLE 121

Query: 1146 XXXXSVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQL 967
                     S+LNNSKTSEFCAPLTSFDWN ++PRRIGTSSIDTTCTIWD+E+GVVETQL
Sbjct: 122  PI-------SVLNNSKTSEFCAPLTSFDWNEIEPRRIGTSSIDTTCTIWDIEKGVVETQL 174

Query: 966  IAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQD 787
            IAHDKEVYDIAWGEA VFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD
Sbjct: 175  IAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 234

Query: 786  LRYMATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALI 607
            LRYMATILMDSNKVVILDIRSPTMPVAEL+RH+ SVNAIAWAPQS RHICSAGDD+QALI
Sbjct: 235  LRYMATILMDSNKVVILDIRSPTMPVAELERHKGSVNAIAWAPQSARHICSAGDDSQALI 294

Query: 606  WELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 457
            WELPTVAGPNGIDPM  YSA +EINQLQWS  QPDWIAIAF +KMQLLKV
Sbjct: 295  WELPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFTNKMQLLKV 344


>gb|AFY23208.1| transparent testa glabra 1 [Rosa rugosa]
          Length = 346

 Score =  537 bits (1384), Expect = e-150
 Identities = 272/352 (77%), Positives = 298/352 (84%), Gaps = 9/352 (2%)
 Frame = -1

Query: 1485 NSGQERS---ENLFTYDSPYPIYAMAFS-SCDDNSKSQH-RIATGSFLEDLNNKVDILSF 1321
            NS QE     EN  TYDSPYP+YAMAFS +    ++  H RIA GSF+E+ +N+VDILSF
Sbjct: 3    NSTQESHLGPENSVTYDSPYPLYAMAFSPAAPTRTRHNHPRIAVGSFIEEFSNRVDILSF 62

Query: 1320 DEETLAFKTHPNLSFDHPYPPTKLMFHPSKPNS----PDLLASSGDFLRLWEIKEGGXXX 1153
            D +TL  K +P+LSFDHPYPPTKLMFHP+ PNS     D+LASSGD+LRLWE+K+     
Sbjct: 63   DPDTLTLKPNPSLSFDHPYPPTKLMFHPN-PNSLHKSSDILASSGDYLRLWEVKDSSVDR 121

Query: 1152 XXXXXXSVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVET 973
                       S+LNNSKTSEFCAPLTSFDWN ++PRRIGTSSIDTTCTIWD+E+GVVET
Sbjct: 122  LEPI-------SVLNNSKTSEFCAPLTSFDWNEIEPRRIGTSSIDTTCTIWDIEKGVVET 174

Query: 972  QLIAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNK 793
            QLIAHDKEVYDIAWGEA VFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNK
Sbjct: 175  QLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 234

Query: 792  QDLRYMATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQA 613
            QDLRYMATILMDSNKVVILDIRSPTMPVAEL+RHR SVNAIAWAPQS RHICSAGDD+QA
Sbjct: 235  QDLRYMATILMDSNKVVILDIRSPTMPVAELERHRGSVNAIAWAPQSARHICSAGDDSQA 294

Query: 612  LIWELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 457
            LIWELPTVAGPNGIDPM  YSA +EINQLQWS  QPDWIAIAF++KMQLLKV
Sbjct: 295  LIWELPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFSNKMQLLKV 346