BLASTX nr result

ID: Coptis25_contig00002613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002613
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycin...   339   6e-91
ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycin...   337   2e-90
ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin...   332   1e-88
ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Viti...   325   8e-87
gb|AAX73300.1| putative pollen specific LIM domain-containing pr...   321   2e-85

>ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycine max]
            gi|255630484|gb|ACU15600.1| unknown [Glycine max]
          Length = 192

 Score =  339 bits (870), Expect = 6e-91
 Identities = 149/183 (81%), Positives = 167/183 (91%)
 Frame = -2

Query: 1016 QKCKACEKTVYLVDQLTADNKVYHKACFRCYHCKGTLKLSNYSSFEGVLYCKPHFDQLFK 837
            QKCKACEKTVYLVDQLTADNK+YHK+CFRCYHCKGTLKLSNY SFEGVLYCKPHFDQLFK
Sbjct: 10   QKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKLSNYCSFEGVLYCKPHFDQLFK 69

Query: 836  RTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKVAVDGT 657
            +TGSLDKSFE  PR  ++++S D+   N+KVSN+F GTQ+KCVACKKTVYPIEKVAVDGT
Sbjct: 70   KTGSLDKSFEGIPRTARLERSTDQVQTNNKVSNLFAGTQEKCVACKKTVYPIEKVAVDGT 129

Query: 656  SYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHHSQLFKEKGNFSQFDKSENSKGVTENT 477
             YH+ CF+C HGGCVISPSNYVAHEHRLYCRHHH+QLFK+KGNFSQ DK EN +GVTENT
Sbjct: 130  FYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQLDKQENDEGVTENT 189

Query: 476  VSE 468
            ++E
Sbjct: 190  ITE 192



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = -2

Query: 734 FGGTQDKCVACKKTVYPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHH 555
           F GT  KC AC+KTVY ++++  D   YH+ CF+C H    +  SNY + E  LYC+ H 
Sbjct: 5   FAGTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKLSNYCSFEGVLYCKPHF 64

Query: 554 SQLFKEKGNFSQ 519
            QLFK+ G+  +
Sbjct: 65  DQLFKKTGSLDK 76


>ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycine max]
            gi|255630349|gb|ACU15531.1| unknown [Glycine max]
          Length = 192

 Score =  337 bits (865), Expect = 2e-90
 Identities = 148/183 (80%), Positives = 166/183 (90%)
 Frame = -2

Query: 1016 QKCKACEKTVYLVDQLTADNKVYHKACFRCYHCKGTLKLSNYSSFEGVLYCKPHFDQLFK 837
            QKCKACEKTVYLVDQLTADNK+YHK+CFRCYHCKGTLKLSNY SFEGVLYCKPHFDQLFK
Sbjct: 10   QKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKLSNYCSFEGVLYCKPHFDQLFK 69

Query: 836  RTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKVAVDGT 657
            +TGSLDKSFE  PR  ++++S D+   N+KVSN+F GTQ+KCVACKKTVYPIEKVAVDGT
Sbjct: 70   KTGSLDKSFEGIPRTARLERSADQVQTNTKVSNLFAGTQEKCVACKKTVYPIEKVAVDGT 129

Query: 656  SYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHHSQLFKEKGNFSQFDKSENSKGVTENT 477
            SYH+ CF+C HGGCVISPSNYVAHEHRLYCRHHH+QLFK+KGNFSQ DK EN +GV EN 
Sbjct: 130  SYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQLDKQENDEGVAENR 189

Query: 476  VSE 468
            ++E
Sbjct: 190  ITE 192



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = -2

Query: 734 FGGTQDKCVACKKTVYPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHH 555
           F GT  KC AC+KTVY ++++  D   YH+ CF+C H    +  SNY + E  LYC+ H 
Sbjct: 5   FAGTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKLSNYCSFEGVLYCKPHF 64

Query: 554 SQLFKEKGNFSQ 519
            QLFK+ G+  +
Sbjct: 65  DQLFKKTGSLDK 76


>ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis]
            gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3,
            putative [Ricinus communis]
          Length = 190

 Score =  332 bits (850), Expect = 1e-88
 Identities = 150/178 (84%), Positives = 164/178 (92%)
 Frame = -2

Query: 1016 QKCKACEKTVYLVDQLTADNKVYHKACFRCYHCKGTLKLSNYSSFEGVLYCKPHFDQLFK 837
            QKCKACEKTVYLVDQLTADNKVYHKACFRC+HCKGTLKLSNYSSFEGVLYCKPHFDQLFK
Sbjct: 9    QKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFK 68

Query: 836  RTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKVAVDGT 657
             TGSLDKSFE  P+ V+VD+S D+ ++NS+VS+MF GTQDKCVACKKTVYPIEKVAVDGT
Sbjct: 69   MTGSLDKSFEGTPKTVRVDRSADQFNSNSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGT 128

Query: 656  SYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHHSQLFKEKGNFSQFDKSENSKGVTE 483
            SYH+ CF+C HGGCVISPSNYVAHE RLYCRHHH+QLFK+KGNFSQ DK E+ K VTE
Sbjct: 129  SYHKACFRCTHGGCVISPSNYVAHEQRLYCRHHHNQLFKQKGNFSQLDKHEHVKPVTE 186



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = -2

Query: 734 FGGTQDKCVACKKTVYPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHH 555
           F GT  KC AC+KTVY ++++  D   YH+ CF+C H    +  SNY + E  LYC+ H 
Sbjct: 4   FAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF 63

Query: 554 SQLFKEKGNFSQ 519
            QLFK  G+  +
Sbjct: 64  DQLFKMTGSLDK 75


>ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
            gi|297733831|emb|CBI15078.3| unnamed protein product
            [Vitis vinifera]
          Length = 182

 Score =  325 bits (834), Expect = 8e-87
 Identities = 148/175 (84%), Positives = 158/175 (90%)
 Frame = -2

Query: 1016 QKCKACEKTVYLVDQLTADNKVYHKACFRCYHCKGTLKLSNYSSFEGVLYCKPHFDQLFK 837
            QKCKACEKTVYLVD+LTADNKVYHKACFRC+HCKGTLKLSNYSSFEGVLYCKPHFDQLFK
Sbjct: 9    QKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFK 68

Query: 836  RTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKVAVDGT 657
             TGSLDKSFE AP+ V+   SVD+G  NSKVS+MF GTQ+KCVACKKTVYPIEKV VDGT
Sbjct: 69   MTGSLDKSFEGAPKTVR---SVDQGQTNSKVSSMFAGTQEKCVACKKTVYPIEKVGVDGT 125

Query: 656  SYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHHSQLFKEKGNFSQFDKSENSKG 492
            SYH+ CF+C HGGC ISPSNY+AHEHRLYCRHHHSQLFKEKGNFSQ DK E  KG
Sbjct: 126  SYHKACFRCTHGGCTISPSNYIAHEHRLYCRHHHSQLFKEKGNFSQLDKQEQVKG 180



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 36/89 (40%), Positives = 49/89 (55%)
 Frame = -2

Query: 734 FGGTQDKCVACKKTVYPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHH 555
           F GT  KC AC+KTVY ++++  D   YH+ CF+C H    +  SNY + E  LYC+ H 
Sbjct: 4   FAGTTQKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF 63

Query: 554 SQLFKEKGNFSQFDKSENSKGVTENTVSE 468
            QLFK  G+    DKS      T  +V +
Sbjct: 64  DQLFKMTGS---LDKSFEGAPKTVRSVDQ 89


>gb|AAX73300.1| putative pollen specific LIM domain-containing protein [Solanum
            lycopersicum]
          Length = 179

 Score =  321 bits (823), Expect = 2e-85
 Identities = 146/173 (84%), Positives = 162/173 (93%)
 Frame = -2

Query: 1016 QKCKACEKTVYLVDQLTADNKVYHKACFRCYHCKGTLKLSNYSSFEGVLYCKPHFDQLFK 837
            QKCKACEKTVYLVDQLTADNKVYHKACFRC+HCKGTLKLSNY+SFEGVLYC+PHFDQLFK
Sbjct: 9    QKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFK 68

Query: 836  RTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKVAVDGT 657
             TGSLDKSFE AP+ V+ ++S D+G +NSKVS++FGGTQDKCVACKKTVYP+EKVAVDGT
Sbjct: 69   MTGSLDKSFEGAPKTVR-ERSADQG-SNSKVSSLFGGTQDKCVACKKTVYPLEKVAVDGT 126

Query: 656  SYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHHSQLFKEKGNFSQFDKSENS 498
            SYHRPCFKC HGGCVISPSNYVAHEHRLYCRHHH+QLFKE+GNFSQ +  E +
Sbjct: 127  SYHRPCFKCSHGGCVISPSNYVAHEHRLYCRHHHTQLFKERGNFSQMEDHEKN 179



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 33/72 (45%), Positives = 44/72 (61%)
 Frame = -2

Query: 734 FGGTQDKCVACKKTVYPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHRLYCRHHH 555
           FGGT  KC AC+KTVY ++++  D   YH+ CF+C H    +  SNY + E  LYCR H 
Sbjct: 4   FGGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHF 63

Query: 554 SQLFKEKGNFSQ 519
            QLFK  G+  +
Sbjct: 64  DQLFKMTGSLDK 75


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