BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002609
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   525   e-148
ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|2...   524   e-147
emb|CBI24136.3| unnamed protein product [Vitis vinifera]              518   e-144
ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   511   e-143
ref|NP_001060941.1| Os08g0135400 [Oryza sativa Japonica Group] g...   503   e-142

>ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 450

 Score =  525 bits (1351), Expect(2) = e-148
 Identities = 260/359 (72%), Positives = 291/359 (81%), Gaps = 21/359 (5%)
 Frame = +2

Query: 206  YTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAIGDTPNPYEKAITI 385
            ++T++QVT AL++SGLESSNLI+GIDFTKSNEWTGK SFNNRSLHAIGDTPNPYEKAI+I
Sbjct: 85   FSTIEQVTNALRESGLESSNLIIGIDFTKSNEWTGKASFNNRSLHAIGDTPNPYEKAISI 144

Query: 386  IGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKRIVPNLRLSG 565
            IGKTLAPFDEDNLIPCFGFGD TTHD EVFSFH D +PCHGFEEVLACYKRIVPNL+LSG
Sbjct: 145  IGKTLAPFDEDNLIPCFGFGDATTHDSEVFSFHDDRSPCHGFEEVLACYKRIVPNLQLSG 204

Query: 566  PTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKTINSIVTASS 745
            PTS+ P+VEAA+DIVEKS GQYHVLVIIADGQVTRS++ ND ELSPQE+KTINSIVTASS
Sbjct: 205  PTSYAPVVEAAIDIVEKSGGQYHVLVIIADGQVTRSVNANDKELSPQEEKTINSIVTASS 264

Query: 746  YPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEKEAAFALAAL 925
            YPLSI+LVGVGDGPW+DM  FDDKIP R FDNFQFVNFTAI +KNAS SEKE AFALAAL
Sbjct: 265  YPLSIILVGVGDGPWDDMKKFDDKIPARGFDNFQFVNFTAIMSKNASPSEKETAFALAAL 324

Query: 926  MEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXAMRS-------------QRSELSSN 1066
            MEIPIQYKA++E G+LG VTGKAKK          A  +             Q S LSS 
Sbjct: 325  MEIPIQYKATVEFGILGRVTGKAKKVVPRPPPASYARHAPPPYAMPYGMPSHQPSNLSSR 384

Query: 1067 VQ--------ESTVQDNNQACPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1219
            +          +T  + NQACPICLT+ +D+AF CGHMTCREC   +S CPICR  IR+
Sbjct: 385  MPSRMPSRQLSNTRDEGNQACPICLTSVKDMAFGCGHMTCRECASKVSNCPICREPIRN 443



 Score = 28.5 bits (62), Expect(2) = e-148
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 81  PKKYARIPDNYTTLDQV 131
           P KY+ IPDN++T++QV
Sbjct: 75  PNKYSFIPDNFSTIEQV 91


>ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|222865197|gb|EEF02328.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  524 bits (1350), Expect(2) = e-147
 Identities = 246/338 (72%), Positives = 288/338 (85%)
 Frame = +2

Query: 206  YTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAIGDTPNPYEKAITI 385
            +++L+QVT AL+++GLESSNL++GIDFTKSNEWTGK SFNNRSLHAIGDTPNPYEKAI+I
Sbjct: 53   FSSLEQVTTALREAGLESSNLVVGIDFTKSNEWTGKVSFNNRSLHAIGDTPNPYEKAISI 112

Query: 386  IGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKRIVPNLRLSG 565
            IGKT+APFDEDNLIPCFGFGD TTHDQEVFSFHSDH+PCHGFEEVLACYK+IVPNLRLSG
Sbjct: 113  IGKTMAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLACYKKIVPNLRLSG 172

Query: 566  PTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKTINSIVTASS 745
            PTS+GP++EAA+DIVEKS GQYHVL+IIADGQVTRS+DT DGE+SPQE++TI +IV ASS
Sbjct: 173  PTSYGPVIEAAIDIVEKSGGQYHVLLIIADGQVTRSVDTGDGEMSPQEEQTIKAIVDASS 232

Query: 746  YPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEKEAAFALAAL 925
            YPLSI+LVGVGDGPWEDM  FDDK+P R FDNFQFVNFTAI +KNA+ SEKE AFALAAL
Sbjct: 233  YPLSIILVGVGDGPWEDMKRFDDKLPAREFDNFQFVNFTAIMSKNATISEKETAFALAAL 292

Query: 926  MEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXAMRSQRSELSSNVQESTVQDNNQAC 1105
            MEIP+QYKA++E G++G   G+AKK          + R       ++V    + +  QAC
Sbjct: 293  MEIPLQYKAAVEFGIIGRSMGQAKKIVPRPPPVPYSRRPVLDREPTHVSSPVLDERTQAC 352

Query: 1106 PICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1219
            PICLTN +DLAF CGHMTCR+CG  +S+CPICR  I S
Sbjct: 353  PICLTNRKDLAFGCGHMTCRDCGSRVSSCPICRRPITS 390



 Score = 26.9 bits (58), Expect(2) = e-147
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +3

Query: 66  EKKPTPKKYARIPDNYTTLDQV 131
           +K+   +KY+ IPDN+++L+QV
Sbjct: 38  KKQSIKQKYSFIPDNFSSLEQV 59


>emb|CBI24136.3| unnamed protein product [Vitis vinifera]
          Length = 5665

 Score =  518 bits (1333), Expect = e-144
 Identities = 258/353 (73%), Positives = 285/353 (80%), Gaps = 21/353 (5%)
 Frame = +2

Query: 224  VTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAIGDTPNPYEKAITIIGKTLA 403
            VT AL++SGLESSNLI+GIDFTKSNEWTGK SFNNRSLHAIGDTPNPYEKAI+IIGKTLA
Sbjct: 5306 VTNALRESGLESSNLIIGIDFTKSNEWTGKASFNNRSLHAIGDTPNPYEKAISIIGKTLA 5365

Query: 404  PFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKRIVPNLRLSGPTSFGP 583
            PFDEDNLIPCFGFGD TTHD EVFSFH D +PCHGFEEVLACYKRIVPNL+LSGPTS+ P
Sbjct: 5366 PFDEDNLIPCFGFGDATTHDSEVFSFHDDRSPCHGFEEVLACYKRIVPNLQLSGPTSYAP 5425

Query: 584  IVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKTINSIVTASSYPLSIV 763
            +VEAA+DIVEKS GQYHVLVIIADGQVTRS++ ND ELSPQE+KTINSIVTASSYPLSI+
Sbjct: 5426 VVEAAIDIVEKSGGQYHVLVIIADGQVTRSVNANDKELSPQEEKTINSIVTASSYPLSII 5485

Query: 764  LVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEKEAAFALAALMEIPIQ 943
            LVGVGDGPW+DM  FDDKIP R FDNFQFVNFTAI +KNAS SEKE AFALAALMEIPIQ
Sbjct: 5486 LVGVGDGPWDDMKKFDDKIPARGFDNFQFVNFTAIMSKNASPSEKETAFALAALMEIPIQ 5545

Query: 944  YKASMELGLLGHVTGKAKKXXXXXXXXXXAMRS-------------QRSELSSNVQ---- 1072
            YKA++E G+LG VTGKAKK          A  +             Q S LSS +     
Sbjct: 5546 YKATVEFGILGRVTGKAKKVVPRPPPASYARHAPPPYAMPYGMPSHQPSNLSSRMPSRMP 5605

Query: 1073 ----ESTVQDNNQACPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1219
                 +T  + NQACPICLT+ +D+AF CGHMTCREC   +S CPICR  IR+
Sbjct: 5606 SRQLSNTRDEGNQACPICLTSVKDMAFGCGHMTCRECASKVSNCPICREPIRN 5658


>ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 451

 Score =  511 bits (1317), Expect(2) = e-143
 Identities = 247/339 (72%), Positives = 283/339 (83%), Gaps = 1/339 (0%)
 Frame = +2

Query: 206  YTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAIGDTPNPYEKAITI 385
            ++TL+QVT AL+  GLESSNLILGIDFTKSNEWTG+ SFN RSLHAIG TPNPYEKAI+I
Sbjct: 110  FSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIGSTPNPYEKAISI 169

Query: 386  IGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKRIVPNLRLSG 565
            IGKTLAPFD+DNLIPCFGFGD TTHDQEVFSFHSDH+P HGFEEVLACY++IVPNL+LSG
Sbjct: 170  IGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPYHGFEEVLACYQKIVPNLKLSG 229

Query: 566  PTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKTINSIVTASS 745
            PTS+ P++EAA+DIVEK+ GQ+HVLVI+ADGQVTRS+DT+DGELSPQE+KTI ++V AS+
Sbjct: 230  PTSYAPVIEAAIDIVEKNRGQFHVLVIVADGQVTRSVDTSDGELSPQEEKTIKAVVDASA 289

Query: 746  YPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEKEAAFALAAL 925
            YPL+IVLVGVGDGPWEDM  FDDKIP R +DNFQFVNFT I +KN S SEKEAAFALAAL
Sbjct: 290  YPLAIVLVGVGDGPWEDMRKFDDKIPARDYDNFQFVNFTEIMSKNISPSEKEAAFALAAL 349

Query: 926  MEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXAMRSQRSELSSNVQESTVQDNNQ-A 1102
            MEIP QYKA+ME G+LG VTG+AK+          +    R   S N   S+  D NQ A
Sbjct: 350  MEIPFQYKATMEFGILGRVTGRAKRIVPKPPPVPYS----RPAPSINTAASSGDDQNQTA 405

Query: 1103 CPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1219
            CP+CLTN RDLAF CGHMTCRECG  L+ CP+CR  I S
Sbjct: 406  CPVCLTNARDLAFGCGHMTCRECGHKLTNCPMCRERITS 444



 Score = 26.6 bits (57), Expect(2) = e-143
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 84  KKYARIPDNYTTLDQV 131
           KKYA I DN++TL+QV
Sbjct: 101 KKYALIRDNFSTLEQV 116


>ref|NP_001060941.1| Os08g0135400 [Oryza sativa Japonica Group]
            gi|46390797|dbj|BAD16303.1| Copine I-like protein [Oryza
            sativa Japonica Group] gi|113622910|dbj|BAF22855.1|
            Os08g0135400 [Oryza sativa Japonica Group]
            gi|215706364|dbj|BAG93220.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222639870|gb|EEE68002.1|
            hypothetical protein OsJ_25957 [Oryza sativa Japonica
            Group]
          Length = 401

 Score =  503 bits (1295), Expect(2) = e-142
 Identities = 241/344 (70%), Positives = 284/344 (82%), Gaps = 6/344 (1%)
 Frame = +2

Query: 206  YTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAIGDTPNPYEKAITI 385
            Y +LDQVT AL+D GLESSNLILGIDFTKSNEWTGK+SF+ +SLH IG TPNPYE+AI+I
Sbjct: 51   YQSLDQVTAALRDQGLESSNLILGIDFTKSNEWTGKRSFSGQSLHKIGSTPNPYEQAISI 110

Query: 386  IGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKRIVPNLRLSG 565
            IGKTLAPFD+DNLIPCFGFGD TTHD  VFSFH D++PCHGFEEVL+CYK+IVP+LRLSG
Sbjct: 111  IGKTLAPFDDDNLIPCFGFGDATTHDYNVFSFHPDNSPCHGFEEVLSCYKKIVPHLRLSG 170

Query: 566  PTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKTINSIVTASS 745
            PTSF PIVEAAVDIV++S GQYHVLVI+ADGQVTRS+DT+D +LSPQE++T++S+V ASS
Sbjct: 171  PTSFAPIVEAAVDIVDRSGGQYHVLVIVADGQVTRSVDTSDNDLSPQERRTVDSVVMASS 230

Query: 746  YPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEKEAAFALAAL 925
            YPLSIVLVGVGDGPWEDM  FDDKIP R FDNFQFVNFT+I +++ +Q +KE+AFALAAL
Sbjct: 231  YPLSIVLVGVGDGPWEDMQKFDDKIPARQFDNFQFVNFTSIMSRSTTQQQKESAFALAAL 290

Query: 926  MEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXA------MRSQRSELSSNVQESTVQ 1087
            ME+PIQYKA+MELG+LG  TGKAK+          A      +R + S  ++        
Sbjct: 291  MEVPIQYKATMELGILGRSTGKAKRIMPAPPPLPSAAGRQPSLRREDSAAATAAAAPPSP 350

Query: 1088 DNNQACPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1219
              +Q CPICLTN +DLAF CGHM CRECG +L+ CPICR TIRS
Sbjct: 351  REDQVCPICLTNAKDLAFGCGHMCCRECGESLTKCPICRQTIRS 394



 Score = 29.6 bits (65), Expect(2) = e-142
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 84  KKYARIPDNYTTLDQV 131
           KKY+ IPDNY +LDQV
Sbjct: 42  KKYSYIPDNYQSLDQV 57