BLASTX nr result

ID: Coptis25_contig00002604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002604
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...    87   2e-15
ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trich...    87   2e-15
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...    86   3e-15
ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...    85   5e-15
ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trich...    84   1e-14

>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/87 (49%), Positives = 58/87 (66%)
 Frame = +2

Query: 2   LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDVLVTNNFEKLMWVCVSKPFDLQRVA 181
           L+ E+S +   V +IS+VG GG GKTTL QL   D  VT +FEK +WVCVS+PFD  R+A
Sbjct: 186 LVGESSQEARDVDVISLVGLGGIGKTTLAQLAFNDAEVTTHFEKKIWVCVSEPFDQVRIA 245

Query: 182 KSIIKEATGDVPSTVAWQDLHRSLSES 262
           K+I+++  G  P  V  Q L + +SES
Sbjct: 246 KAILEQLEGRAPDLVELQSLLQRVSES 272


>ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832446|gb|EEE70923.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 742

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/87 (48%), Positives = 60/87 (68%)
 Frame = +2

Query: 2   LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDVLVTNNFEKLMWVCVSKPFDLQRVA 181
           L+ E+S +   V +I++VG GG GKTTL QL  KD  VT +FEK +WVCVS+PFD  R+A
Sbjct: 160 LVGESSQEARDVDVITLVGLGGIGKTTLAQLAYKDAEVTAHFEKKIWVCVSEPFDEVRIA 219

Query: 182 KSIIKEATGDVPSTVAWQDLHRSLSES 262
           K+I+++  G  P+ +  Q L + +SES
Sbjct: 220 KAILEQLEGSAPNLIELQSLLQMVSES 246


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/87 (50%), Positives = 60/87 (68%)
 Frame = +2

Query: 2   LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDVLVTNNFEKLMWVCVSKPFDLQRVA 181
           LL+E+SH+   V +IS+VG GG GKTTL QL   D  VT +FEK +WVCVS+PFD  R+A
Sbjct: 186 LLAESSHEARDVDVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSEPFDEIRIA 245

Query: 182 KSIIKEATGDVPSTVAWQDLHRSLSES 262
           K+I+++  G   + V  Q L + +SES
Sbjct: 246 KAILEQLEGRPTNLVELQSLLQGVSES 272


>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = +2

Query: 2   LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDVLVTNNFEKLMWVCVSKPFDLQRVA 181
           LL+E+S +   V +IS+VG GG GKTTL QL   D  VT +FEK +WVCVS PFD  ++A
Sbjct: 95  LLAESSQKARDVDVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSDPFDEVKIA 154

Query: 182 KSIIKEATGDVPSTVAWQDLHRSLSES 262
           K+I+++  G  P+ V  Q L + +SES
Sbjct: 155 KAILEQLEGSAPNLVELQSLLQRVSES 181


>ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832449|gb|EEE70926.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 766

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/87 (50%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDVLVTNNFEKLMWVCVSKPFDLQRVA 181
           LL E+S +   V  IS+VG GG GKTTL QL   D  VT +FEK +WVCVS PFD  R+A
Sbjct: 155 LLGESSQEAWDVDAISLVGLGGIGKTTLAQLAFNDADVTAHFEKKIWVCVSDPFDEVRIA 214

Query: 182 KSIIKEATGDVPSTVAWQDLHRSLSES 262
           K+I+++  G  P  V  Q L + +SES
Sbjct: 215 KAILEQLEGRAPDLVELQSLLQRVSES 241