BLASTX nr result

ID: Coptis25_contig00002602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002602
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...   134   6e-30
ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...   132   3e-29
ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trich...   132   4e-29
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...   130   1e-28
ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trich...   130   1e-28

>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/123 (54%), Positives = 88/123 (71%)
 Frame = -2

Query: 370 LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDKEVMKNFEKLMWVCVSKPFDLERVA 191
           LL+E+S +   V +IS+VG GG GKTTL QL   D EV  +FEK +WVCVS PFD  ++A
Sbjct: 95  LLAESSQKARDVDVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSDPFDEVKIA 154

Query: 190 KSIIKEATGDVPNIVVWQDLHRSLSESIRGKKFLLVLDDVWTYDREIWRKLRVSLDGGAQ 11
           K+I+++  G  PN+V  Q L + +SESI+GK+FLLVLDDVWT +   W KL+ SL G A+
Sbjct: 155 KAILEQLEGSAPNLVELQSLLQRVSESIKGKRFLLVLDDVWTENHGQWEKLKPSLTGCAR 214

Query: 10  GSR 2
           GSR
Sbjct: 215 GSR 217


>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/123 (52%), Positives = 87/123 (70%)
 Frame = -2

Query: 370 LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDKEVMKNFEKLMWVCVSKPFDLERVA 191
           L+ E+S +   V +IS+VG GG GKTTL QL   D EV  +FEK +WVCVS+PFD  R+A
Sbjct: 186 LVGESSQEARDVDVISLVGLGGIGKTTLAQLAFNDAEVTTHFEKKIWVCVSEPFDQVRIA 245

Query: 190 KSIIKEATGDVPNIVVWQDLHRSLSESIRGKKFLLVLDDVWTYDREIWRKLRVSLDGGAQ 11
           K+I+++  G  P++V  Q L + +SESI+GK+FLLVLDDVWT +   W +L+ SL G A 
Sbjct: 246 KAILEQLEGRAPDLVELQSLLQRVSESIKGKRFLLVLDDVWTENHRQWEQLKPSLKGSAP 305

Query: 10  GSR 2
           GSR
Sbjct: 306 GSR 308


>ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832449|gb|EEE70926.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 766

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/123 (53%), Positives = 86/123 (69%)
 Frame = -2

Query: 370 LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDKEVMKNFEKLMWVCVSKPFDLERVA 191
           LL E+S +   V  IS+VG GG GKTTL QL   D +V  +FEK +WVCVS PFD  R+A
Sbjct: 155 LLGESSQEAWDVDAISLVGLGGIGKTTLAQLAFNDADVTAHFEKKIWVCVSDPFDEVRIA 214

Query: 190 KSIIKEATGDVPNIVVWQDLHRSLSESIRGKKFLLVLDDVWTYDREIWRKLRVSLDGGAQ 11
           K+I+++  G  P++V  Q L + +SESI+GK+FLLVLDDVWT +   W +L+ SL GGA 
Sbjct: 215 KAILEQLEGRAPDLVELQSLLQRVSESIKGKRFLLVLDDVWTENHRQWEQLKPSLTGGAP 274

Query: 10  GSR 2
           GSR
Sbjct: 275 GSR 277


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/123 (53%), Positives = 87/123 (70%)
 Frame = -2

Query: 370 LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDKEVMKNFEKLMWVCVSKPFDLERVA 191
           LL+E+SH+   V +IS+VG GG GKTTL QL   D EV  +FEK +WVCVS+PFD  R+A
Sbjct: 186 LLAESSHEARDVDVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSEPFDEIRIA 245

Query: 190 KSIIKEATGDVPNIVVWQDLHRSLSESIRGKKFLLVLDDVWTYDREIWRKLRVSLDGGAQ 11
           K+I+++  G   N+V  Q L + +SESI GK+ LLVLDDVWT +   W +L+ SL G A+
Sbjct: 246 KAILEQLEGRPTNLVELQSLLQGVSESITGKRLLLVLDDVWTENHGQWEQLKPSLTGCAR 305

Query: 10  GSR 2
           GSR
Sbjct: 306 GSR 308


>ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832446|gb|EEE70923.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 742

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/123 (51%), Positives = 87/123 (70%)
 Frame = -2

Query: 370 LLSETSHQDSHVPLISIVGTGGFGKTTLVQLILKDKEVMKNFEKLMWVCVSKPFDLERVA 191
           L+ E+S +   V +I++VG GG GKTTL QL  KD EV  +FEK +WVCVS+PFD  R+A
Sbjct: 160 LVGESSQEARDVDVITLVGLGGIGKTTLAQLAYKDAEVTAHFEKKIWVCVSEPFDEVRIA 219

Query: 190 KSIIKEATGDVPNIVVWQDLHRSLSESIRGKKFLLVLDDVWTYDREIWRKLRVSLDGGAQ 11
           K+I+++  G  PN++  Q L + +SESI+GK+ LLVLDDVWT +   W +L+ S  G A+
Sbjct: 220 KAILEQLEGSAPNLIELQSLLQMVSESIKGKRLLLVLDDVWTDNHRQWEQLKPSFTGCAR 279

Query: 10  GSR 2
           GSR
Sbjct: 280 GSR 282


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