BLASTX nr result

ID: Coptis25_contig00002596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002596
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group] g...   101   2e-38
ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group] g...   101   2e-38
tpg|DAA52377.1| TPA: putative translation elongation factor fami...   101   2e-38
ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [S...   101   2e-38
dbj|BAJ87342.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   3e-38

>ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group]
           gi|49387779|dbj|BAD26337.1| putative elongation factor 2
           [Oryza sativa Japonica Group]
           gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa
           Japonica Group] gi|119395216|gb|ABL74569.1| elongation
           factor 2 [Oryza sativa Japonica Group]
           gi|125539668|gb|EAY86063.1| hypothetical protein
           OsI_07431 [Oryza sativa Indica Group]
           gi|125582310|gb|EAZ23241.1| hypothetical protein
           OsJ_06933 [Oryza sativa Japonica Group]
          Length = 843

 Score =  101 bits (251), Expect(2) = 2e-38
 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%)
 Frame = +3

Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392
           L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV      SSQ
Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784

Query: 393 LSA 401
           L A
Sbjct: 785 LRA 787



 Score = 82.8 bits (203), Expect(2) = 2e-38
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +1

Query: 1   KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138
           KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ
Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718


>ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group]
           gi|38344860|emb|CAE01286.2| OSJNBa0020P07.3 [Oryza
           sativa Japonica Group] gi|113563628|dbj|BAF13971.1|
           Os04g0118400 [Oryza sativa Japonica Group]
           gi|116308871|emb|CAH66007.1| H0613H07.5 [Oryza sativa
           Indica Group] gi|119395218|gb|ABL74570.1| elongation
           factor [Oryza sativa Japonica Group]
           gi|125589153|gb|EAZ29503.1| hypothetical protein
           OsJ_13577 [Oryza sativa Japonica Group]
           gi|215704910|dbj|BAG94938.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215715300|dbj|BAG95051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 843

 Score =  101 bits (251), Expect(2) = 2e-38
 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%)
 Frame = +3

Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392
           L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV      SSQ
Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784

Query: 393 LSA 401
           L A
Sbjct: 785 LRA 787



 Score = 82.8 bits (203), Expect(2) = 2e-38
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +1

Query: 1   KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138
           KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ
Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718


>tpg|DAA52377.1| TPA: putative translation elongation factor family protein [Zea
           mays]
          Length = 843

 Score =  101 bits (251), Expect(2) = 2e-38
 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%)
 Frame = +3

Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392
           L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV      SSQ
Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784

Query: 393 LSA 401
           L A
Sbjct: 785 LRA 787



 Score = 82.8 bits (203), Expect(2) = 2e-38
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +1

Query: 1   KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138
           KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ
Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718


>ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [Sorghum bicolor]
           gi|241928310|gb|EES01455.1| hypothetical protein
           SORBIDRAFT_03g034200 [Sorghum bicolor]
          Length = 843

 Score =  101 bits (251), Expect(2) = 2e-38
 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%)
 Frame = +3

Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392
           L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV      SSQ
Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784

Query: 393 LSA 401
           L A
Sbjct: 785 LRA 787



 Score = 82.8 bits (203), Expect(2) = 2e-38
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +1

Query: 1   KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138
           KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ
Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718


>dbj|BAJ87342.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 763

 Score =  102 bits (254), Expect(2) = 3e-38
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = +3

Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV 383
           L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV
Sbjct: 645 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV 695



 Score = 81.3 bits (199), Expect(2) = 3e-38
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +1

Query: 1   KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138
           KEGALAEENMRGICFEVC V LH DAIHRGG Q++ TA+RVIYASQ
Sbjct: 593 KEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQ 638


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