BLASTX nr result
ID: Coptis25_contig00002596
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002596 (403 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group] g... 101 2e-38 ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group] g... 101 2e-38 tpg|DAA52377.1| TPA: putative translation elongation factor fami... 101 2e-38 ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [S... 101 2e-38 dbj|BAJ87342.1| predicted protein [Hordeum vulgare subsp. vulgare] 102 3e-38 >ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group] gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa Japonica Group] gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa Japonica Group] gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_06933 [Oryza sativa Japonica Group] Length = 843 Score = 101 bits (251), Expect(2) = 2e-38 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%) Frame = +3 Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392 L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV SSQ Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784 Query: 393 LSA 401 L A Sbjct: 785 LRA 787 Score = 82.8 bits (203), Expect(2) = 2e-38 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = +1 Query: 1 KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138 KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718 >ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group] gi|38344860|emb|CAE01286.2| OSJNBa0020P07.3 [Oryza sativa Japonica Group] gi|113563628|dbj|BAF13971.1| Os04g0118400 [Oryza sativa Japonica Group] gi|116308871|emb|CAH66007.1| H0613H07.5 [Oryza sativa Indica Group] gi|119395218|gb|ABL74570.1| elongation factor [Oryza sativa Japonica Group] gi|125589153|gb|EAZ29503.1| hypothetical protein OsJ_13577 [Oryza sativa Japonica Group] gi|215704910|dbj|BAG94938.1| unnamed protein product [Oryza sativa Japonica Group] gi|215715300|dbj|BAG95051.1| unnamed protein product [Oryza sativa Japonica Group] Length = 843 Score = 101 bits (251), Expect(2) = 2e-38 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%) Frame = +3 Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392 L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV SSQ Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784 Query: 393 LSA 401 L A Sbjct: 785 LRA 787 Score = 82.8 bits (203), Expect(2) = 2e-38 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = +1 Query: 1 KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138 KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718 >tpg|DAA52377.1| TPA: putative translation elongation factor family protein [Zea mays] Length = 843 Score = 101 bits (251), Expect(2) = 2e-38 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%) Frame = +3 Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392 L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV SSQ Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784 Query: 393 LSA 401 L A Sbjct: 785 LRA 787 Score = 82.8 bits (203), Expect(2) = 2e-38 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = +1 Query: 1 KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138 KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718 >ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [Sorghum bicolor] gi|241928310|gb|EES01455.1| hypothetical protein SORBIDRAFT_03g034200 [Sorghum bicolor] Length = 843 Score = 101 bits (251), Expect(2) = 2e-38 Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 6/63 (9%) Frame = +3 Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV------SSQ 392 L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPV SSQ Sbjct: 725 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQ 784 Query: 393 LSA 401 L A Sbjct: 785 LRA 787 Score = 82.8 bits (203), Expect(2) = 2e-38 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = +1 Query: 1 KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138 KEGALAEENMRGICFEVC V LHADAIHRGG Q++ TA+RVIYASQ Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ 718 >dbj|BAJ87342.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 763 Score = 102 bits (254), Expect(2) = 3e-38 Identities = 48/51 (94%), Positives = 50/51 (98%) Frame = +3 Query: 231 LVEPVYMVEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV 383 L+EPVY+VEIQAPE ALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV Sbjct: 645 LLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPV 695 Score = 81.3 bits (199), Expect(2) = 3e-38 Identities = 38/46 (82%), Positives = 41/46 (89%) Frame = +1 Query: 1 KEGALAEENMRGICFEVCGVGLHADAIHRGGSQILLTAKRVIYASQ 138 KEGALAEENMRGICFEVC V LH DAIHRGG Q++ TA+RVIYASQ Sbjct: 593 KEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQ 638