BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002594
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [...   461   e-127
ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isofor...   458   e-126
ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126
ref|NP_181030.1| coatomer subunit epsilon-2 [Arabidopsis thalian...   442   e-121
ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thalian...   440   e-121

>ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [Cucumis sativus]
            gi|449490635|ref|XP_004158662.1| PREDICTED: coatomer
            subunit epsilon-1-like [Cucumis sativus]
          Length = 289

 Score =  461 bits (1185), Expect = e-127
 Identities = 229/289 (79%), Positives = 264/289 (91%)
 Frame = -1

Query: 1301 SAPDHLFALRNSFYLGAYQAAINLSTSLNNLSEEDSIEKDSLVFRSYVAIGAPELVIGEI 1122
            +APDHLF LRN+FYLGAYQAAIN ++ L NLS +D IE+DS+VFRSY+A+G+ +L I EI
Sbjct: 2    AAPDHLFNLRNNFYLGAYQAAIN-NSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60

Query: 1121 DSSKPTALQAVKLLALYLHRPENKETVITSLKEWLSDAAIGSNPVLRLIAGIVYMHEQDY 942
            DSS PT LQAVKLLALYL  P +KE+ I SL+EWLSD AIG+N  LRLIAGI++MHEQDY
Sbjct: 61   DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120

Query: 941  NEALKHTHSGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLNLAV 762
            NEALKHT++GGTMELHALNVQIFLKMHRSDYAE+QL++MQQIDEDHTLTQLANAWLNLAV
Sbjct: 121  NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 761  GGSKIQEALLIFQDFSEKFQMTALILNGKAVCNMHMGHFDEAEHLLLDALNMDAKDPETL 582
            GGSKIQEA LIFQDFSEK+ MT+LILNG+AVC MHMG+FDEAE LLL+ALN DAKDPETL
Sbjct: 181  GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 581  ANLIVCSLHLGRPSSRYLSQLKLSHPAHMLVKRISSAEENFERAVQTVA 435
            ANL+VCSLHLG+P+SR+LSQLK+SHP HMLVKRIS+AEENF+RAVQ+VA
Sbjct: 241  ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 289


>ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isoform 1 [Vitis vinifera]
            gi|297740898|emb|CBI31080.3| unnamed protein product
            [Vitis vinifera]
          Length = 289

 Score =  458 bits (1178), Expect = e-126
 Identities = 233/289 (80%), Positives = 259/289 (89%)
 Frame = -1

Query: 1301 SAPDHLFALRNSFYLGAYQAAINLSTSLNNLSEEDSIEKDSLVFRSYVAIGAPELVIGEI 1122
            +APD LF LRN+F+LGA+QAAIN ++ + NLS EDSIE+D LV RSY+A+G+ +LVI EI
Sbjct: 2    AAPDLLFGLRNNFFLGAFQAAIN-NSDIPNLSPEDSIERDCLVHRSYIALGSYQLVINEI 60

Query: 1121 DSSKPTALQAVKLLALYLHRPENKETVITSLKEWLSDAAIGSNPVLRLIAGIVYMHEQDY 942
            DSS  T LQAVKLLALYL  PENKE+ I+SLKE L D AIG+NP+LRLIAGIV+MHEQDY
Sbjct: 61   DSSAATPLQAVKLLALYLSSPENKESTISSLKELLGDPAIGNNPILRLIAGIVFMHEQDY 120

Query: 941  NEALKHTHSGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLNLAV 762
            NEALKHTH GGTMELHALNVQIFLKMHRSDYAEKQLKIMQQ+DEDHTLTQLANAWLNLAV
Sbjct: 121  NEALKHTHPGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQLANAWLNLAV 180

Query: 761  GGSKIQEALLIFQDFSEKFQMTALILNGKAVCNMHMGHFDEAEHLLLDALNMDAKDPETL 582
            GGSKIQEA LIFQDFSEK+QMT LILNGKAVC MHMGHFDEAE LLL+ALN DAKDPETL
Sbjct: 181  GGSKIQEAYLIFQDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALNKDAKDPETL 240

Query: 581  ANLIVCSLHLGRPSSRYLSQLKLSHPAHMLVKRISSAEENFERAVQTVA 435
            ANL+VCSLHLG+ SSRYLSQLKLSHP H+LV R S+AEE F+RAVQT+A
Sbjct: 241  ANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 289


>ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|222860138|gb|EEE97685.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  458 bits (1178), Expect = e-126
 Identities = 230/291 (79%), Positives = 262/291 (90%)
 Frame = -1

Query: 1307 MASAPDHLFALRNSFYLGAYQAAINLSTSLNNLSEEDSIEKDSLVFRSYVAIGAPELVIG 1128
            MA APDHLF LRN+FYLGAYQAAIN S  L NLS +D++E+DSLV+RSY+A+ + +LVI 
Sbjct: 1    MAGAPDHLFNLRNNFYLGAYQAAINTS-DLPNLSPDDAVERDSLVYRSYIALASYQLVIH 59

Query: 1127 EIDSSKPTALQAVKLLALYLHRPENKETVITSLKEWLSDAAIGSNPVLRLIAGIVYMHEQ 948
            EID +  T LQAVKLLALYL  PENKE+ I+SLKEWL+D+AI +N +LRLIAGI++MHE+
Sbjct: 60   EIDDAAATPLQAVKLLALYLSSPENKESTISSLKEWLADSAIANNAILRLIAGIIFMHEE 119

Query: 947  DYNEALKHTHSGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLNL 768
            DYNEALKHT++GGTMELHALNVQIFLKMHRSDYAEKQL+IMQQIDEDHTLTQLA AWLNL
Sbjct: 120  DYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNL 179

Query: 767  AVGGSKIQEALLIFQDFSEKFQMTALILNGKAVCNMHMGHFDEAEHLLLDALNMDAKDPE 588
            AVGGSKIQEA LIFQDFSEK+ MT LILNGKAVC MHMG+FDEAE LLL+ALN DAKDPE
Sbjct: 180  AVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAETLLLEALNKDAKDPE 239

Query: 587  TLANLIVCSLHLGRPSSRYLSQLKLSHPAHMLVKRISSAEENFERAVQTVA 435
            TLANL+VCSLH+G+ SSRYLSQLKLSHP H+LVKR SSAE+NFERAVQ+VA
Sbjct: 240  TLANLVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSVA 290


>ref|NP_181030.1| coatomer subunit epsilon-2 [Arabidopsis thaliana]
            gi|6647445|sp|O64748.1|COPE2_ARATH RecName: Full=Coatomer
            subunit epsilon-2; AltName: Full=Epsilon-coat protein 2;
            Short=Epsilon-COP 2 gi|3033380|gb|AAC12824.1| putative
            coatomer epsilon subunit [Arabidopsis thaliana]
            gi|19715634|gb|AAL91638.1| At2g34840/F19I3.7 [Arabidopsis
            thaliana] gi|22655446|gb|AAM98315.1| At2g34840/F19I3.7
            [Arabidopsis thaliana] gi|330253934|gb|AEC09028.1|
            coatomer subunit epsilon-2 [Arabidopsis thaliana]
          Length = 293

 Score =  442 bits (1136), Expect = e-121
 Identities = 216/291 (74%), Positives = 259/291 (89%)
 Frame = -1

Query: 1307 MASAPDHLFALRNSFYLGAYQAAINLSTSLNNLSEEDSIEKDSLVFRSYVAIGAPELVIG 1128
            M + PDHLF LRN+FYLGAYQ AIN ++ + NLS E+++E+D LVFRSY+A+G+ +LVI 
Sbjct: 4    MGAGPDHLFNLRNNFYLGAYQTAIN-NSEIANLSPENAVERDCLVFRSYIALGSYQLVIS 62

Query: 1127 EIDSSKPTALQAVKLLALYLHRPENKETVITSLKEWLSDAAIGSNPVLRLIAGIVYMHEQ 948
            EID S  T LQAVKLLA+YL  P+NKE+ I+SLKEWL+D+ IG+N  LRLIAGI++MHE+
Sbjct: 63   EIDESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEE 122

Query: 947  DYNEALKHTHSGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLNL 768
            DYNE LKHTH+GGTM+L+ALNVQIF+KMHR++YAEKQL++MQQIDEDHTLTQLA+AWLNL
Sbjct: 123  DYNETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNL 182

Query: 767  AVGGSKIQEALLIFQDFSEKFQMTALILNGKAVCNMHMGHFDEAEHLLLDALNMDAKDPE 588
            AVGGSKIQEA LIF+DFSEK+ MT LILNGKAVC M MG+FDEAE LLL+ALN DAKDPE
Sbjct: 183  AVGGSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPE 242

Query: 587  TLANLIVCSLHLGRPSSRYLSQLKLSHPAHMLVKRISSAEENFERAVQTVA 435
            TLANL+VCSLH+G+ SSR+LSQLKLSHP H+LVKR+SSAE+NFERAVQ VA
Sbjct: 243  TLANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 293


>ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thaliana]
            gi|75336896|sp|Q9SA78.1|COPE1_ARATH RecName:
            Full=Coatomer subunit epsilon-1; AltName:
            Full=Epsilon-coat protein 1; Short=Epsilon-COP 1
            gi|4587519|gb|AAD25750.1|AC007060_8 Strong similarity to
            F19I3.7 gi|3033380 putative coatomer epsilon subunit from
            Arabidopsis thaliana BAC gb|AC004238. ESTs gb|Z17908,
            gb|AA728673, gb|N96555, gb|H76335, gb|AA712463,
            gb|W43247, gb|T45611, gb|T21160, gb|T14119 and AI100483
            come from this gene [Arabidopsis thaliana]
            gi|13194794|gb|AAK15559.1|AF348588_1 putative coatomer
            protein, epsilon subunit [Arabidopsis thaliana]
            gi|13878125|gb|AAK44140.1|AF370325_1 putative coatomer
            protein, epsilon subunit [Arabidopsis thaliana]
            gi|17104797|gb|AAL34287.1| putative coatomer protein,
            epsilon subunit [Arabidopsis thaliana]
            gi|332193133|gb|AEE31254.1| coatomer subunit epsilon-1
            [Arabidopsis thaliana]
          Length = 292

 Score =  440 bits (1131), Expect = e-121
 Identities = 213/289 (73%), Positives = 258/289 (89%)
 Frame = -1

Query: 1301 SAPDHLFALRNSFYLGAYQAAINLSTSLNNLSEEDSIEKDSLVFRSYVAIGAPELVIGEI 1122
            + PDHLF LRN FYLGAYQAAIN ++ + NLS+ED +E+D LV R+Y+A+G+ +LVI EI
Sbjct: 5    AGPDHLFNLRNHFYLGAYQAAIN-NSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEI 63

Query: 1121 DSSKPTALQAVKLLALYLHRPENKETVITSLKEWLSDAAIGSNPVLRLIAGIVYMHEQDY 942
            D +  T LQAVKLLA+YL  PENKE+ I+SL+EWL+D  +G+N ++RLIAG ++MHE+DY
Sbjct: 64   DEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDY 123

Query: 941  NEALKHTHSGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLNLAV 762
            NEALKHTHSGGTM+LHALNVQIF+KMHRSD+AEKQL++MQQIDEDHTLTQLA+AWLNLAV
Sbjct: 124  NEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAV 183

Query: 761  GGSKIQEALLIFQDFSEKFQMTALILNGKAVCNMHMGHFDEAEHLLLDALNMDAKDPETL 582
            GGSKIQEA LIFQDFSEK+ MT+LILNGKAVC MHMG+F+EAE LLL+ALN DAKDPETL
Sbjct: 184  GGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETL 243

Query: 581  ANLIVCSLHLGRPSSRYLSQLKLSHPAHMLVKRISSAEENFERAVQTVA 435
            ANL+VCSLH+G+ SSRYL+QLKLSHP H+LVKR +SAE+NFERA+Q+ A
Sbjct: 244  ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292