BLASTX nr result

ID: Coptis25_contig00002592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002592
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-...   235   2e-59
gb|ADL36811.1| NAC domain class transcription factor [Malus x do...   234   4e-59
emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]   226   1e-56
ref|XP_002311983.1| NAC domain protein, IPR003441 [Populus trich...   210   6e-52
ref|XP_004150380.1| PREDICTED: NAC domain-containing protein 78-...   205   3e-50

>ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera]
            gi|296085948|emb|CBI31389.3| unnamed protein product
            [Vitis vinifera]
          Length = 559

 Score =  235 bits (599), Expect = 2e-59
 Identities = 161/430 (37%), Positives = 238/430 (55%), Gaps = 14/430 (3%)
 Frame = +2

Query: 2    VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNN--VVFPKSEFDHDCTLDGF--- 166
            V +DAFVLCR+F+KSG GPKNGE YGAP +EEEWD++   VVF   E   +  + G    
Sbjct: 146  VAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEWDEDEDVVVFVPGELAAEEVVAGHEPS 205

Query: 167  DEYVQAQQDLAVATTAPNELLIGNDGEDGCN-YVGNPEGSSEDDQKALIGTGQNDGILDL 343
            DE V  ++ L +     N+ L  N     C+ Y  +    +E++QK  IG  +N    +L
Sbjct: 206  DEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKYAEDSRVFNENEQKPFIGMEENHCGSEL 265

Query: 344  P-DQKMFNFPEQFQMDQTPNENDYFALE-DFLNPADDNYSAQDPVDGKLTYFDAPQNPPV 517
            P DQK+F+  EQ+++D    +++Y+  + + +N  + +Y   +P      Y DA +N   
Sbjct: 266  PNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVNSVEVDYLLDEP------YLDASENLAF 319

Query: 518  TDESFVEVDE-RKPFDADQSPFEMLDEYINYFDAYDNDVMLSFNASEFGEVGVPNMVQ-- 688
             D  F+E D+   P + D S F+ +DEY+ + DA D D +       F  +G  N +   
Sbjct: 320  EDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDA-DGDNLQQMAFGSFEMMGSENPLSDL 377

Query: 689  -PALIGEVHTGNEHAHLPFPEPSETNVE-GASSSEQKPVIAKTAADVQFDKGWDGSIAKQ 862
             P     V+ G E   +   + SE   + GASSS++ P   +  +D+ +         KQ
Sbjct: 378  APLDQEPVNGGAEKLPIGSQQLSEAYGDSGASSSKKNPEATEFESDIPYP------FIKQ 431

Query: 863  VS-RMLGSISAPTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTLIDNDKIWS 1039
             S ++LG I AP A A++ PTK+ A   NSA +SSSSVH+TAGMI I   TL  N   WS
Sbjct: 432  ASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQIRDTTLSGNGVDWS 491

Query: 1040 LGKSGNADLLLPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFLWVMLLSMS 1219
             GKSGN + +L +G+     N  S+S EP+ + +S KA  VI R+GFY  F+WV++LS+S
Sbjct: 492  YGKSGNINFMLSFGLPQGETN--SASLEPIASLMSGKAGPVISRAGFYLIFIWVLILSVS 549

Query: 1220 CKIGSYIYTR 1249
             KIG+ I +R
Sbjct: 550  YKIGTCICSR 559


>gb|ADL36811.1| NAC domain class transcription factor [Malus x domestica]
          Length = 607

 Score =  234 bits (597), Expect = 4e-59
 Identities = 179/480 (37%), Positives = 239/480 (49%), Gaps = 66/480 (13%)
 Frame = +2

Query: 8    KDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNNV-----------VFPKSEFDHD-- 148
            KD +VLCR+F+KSG GPKNGE YGAP++EEEWDD++V           V   SE  H   
Sbjct: 149  KDPYVLCRIFQKSGTGPKNGEKYGAPVMEEEWDDDDVTCVPGEEAAADVVALSEEPHVEA 208

Query: 149  -CTLDGFDEYVQA-QQDLAVATTAPNELLIGNDG---EDGCNYVGNPEGSSEDDQKALIG 313
             C  DG   YV+A   D  + T  P+E           +  +Y+ +     EDD KA+IG
Sbjct: 209  ICVNDG--AYVEAFDLDQNLDTGIPSESAPPPSNFYYGETSHYIEHSGDFVEDDTKAVIG 266

Query: 314  TGQNDGILDLPDQKMFNFPE-----------QFQMDQTP-----------NENDYFALED 427
            TG+   +    DQ  FN+PE           ++   Q+P           NE D  +++D
Sbjct: 267  TGET--LEYHGDQMFFNYPEHNETVGNPVKNEYMTSQSPEDLKFVDLPEHNEADAKSVKD 324

Query: 428  --FLNPADD------NYSAQDPVDGKLTYFDAPQNPPVTDESFVEVDERKPFDADQSPFE 583
              FL P+DD      NYS  +P      Y +A +N P+ D  F+E ++        + F+
Sbjct: 325  ECFLEPSDDANPAVVNYSLNEP------YLNATENTPIGDGLFLEANDLSNPVESTAGFD 378

Query: 584  MLDEYINYFDAYDNDVMLSFNASEFGEVGVPNMV-------QPALIGEVHT---GNEHAH 733
            MLDEY+ YFDA D D+    +   +G +GV N V       Q  + GE      G EH  
Sbjct: 379  MLDEYLTYFDAND-DISQYIDFDSYGMMGVENYVPDEAPADQKLVNGETEPQPMGGEHVQ 437

Query: 734  LPFPEP-------SETNVEGASSSEQKPVIAKTAADVQFDKGWDGSIAKQVSRM-LGSIS 889
             P P+P          + + ASSS       K  A+ +F+   +    K+ S M LGSI 
Sbjct: 438  -PEPQPLGGEHLVQPVDTDDASSS-------KKTAEFKFESDGNYPFIKKASHMMLGSIP 489

Query: 890  APTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTLIDNDKIWSLGKSGNADLL 1069
            AP AFA+E P K A    NS A SSSSVHVTA MI I  +T  DN   WS GK G  +L+
Sbjct: 490  APPAFASEFPGKEAMRRLNSGAASSSSVHVTAAMIRIRDITSSDNRMDWSFGKDGVVNLV 549

Query: 1070 LPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFLWVMLLSMSCKIGSYIYTR 1249
                ++  + N  S +  P+G +LS K   V+ R  F F F WV+ LSMS KIGSYIYTR
Sbjct: 550  FSVQLSQDDGN--SGNLVPVGGSLSGKTGCVVMRGWFLFMFFWVLFLSMSLKIGSYIYTR 607


>emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]
          Length = 573

 Score =  226 bits (575), Expect = 1e-56
 Identities = 155/418 (37%), Positives = 229/418 (54%), Gaps = 14/418 (3%)
 Frame = +2

Query: 2    VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNN--VVFPKSEFDHDCTLDGF--- 166
            V +DAFVLCR+F+KSG GPKNGE YGAP +EEEWD++   VVF   E   +  + G    
Sbjct: 146  VAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEWDEDEDVVVFVPGELAAEEVVAGHEPS 205

Query: 167  DEYVQAQQDLAVATTAPNELLIGNDGEDGCN-YVGNPEGSSEDDQKALIGTGQNDGILDL 343
            DE V  ++ L +     N+ L  N     C+ Y  +    +E++QK  IG  +N    +L
Sbjct: 206  DEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKYAEDSRVFNENEQKPFIGMEENHCGSEL 265

Query: 344  P-DQKMFNFPEQFQMDQTPNENDYFALE-DFLNPADDNYSAQDPVDGKLTYFDAPQNPPV 517
            P DQK+F+  EQ+++D    +++Y+  + + +N  + +Y   +P      Y DA +N   
Sbjct: 266  PNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVNSVEVDYLLDEP------YLDASENLAF 319

Query: 518  TDESFVEVDE-RKPFDADQSPFEMLDEYINYFDAYDNDVMLSFNASEFGEVGVPNMVQ-- 688
             D  F+E D+   P + D S F+ +DEY+ + DA D D +       F  +G  N +   
Sbjct: 320  EDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDA-DGDNLQQMAFGSFEMMGSENPLSDL 377

Query: 689  -PALIGEVHTGNEHAHLPFPEPSETNVE-GASSSEQKPVIAKTAADVQFDKGWDGSIAKQ 862
             P     V+ G E   +   + SE   + GASSS++ P   +  +D+ +         KQ
Sbjct: 378  APLDQEPVNGGAEKXPIGSQQLSEAYGDSGASSSKKNPXATEFESDIPYP------FIKQ 431

Query: 863  VS-RMLGSISAPTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTLIDNDKIWS 1039
             S ++LG I AP A A++ PTK+ A   NSA +SSSSVH+TAGMI I   TL  N   WS
Sbjct: 432  ASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQIRDTTLSGNGVDWS 491

Query: 1040 LGKSGNADLLLPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFLWVMLLS 1213
             GKSGN + +L +G+     N  S+S EP+ + +S KA  VI R+GFY  F+WV++LS
Sbjct: 492  YGKSGNINFMLSFGLPQGETN--SASLEPIASLMSGKAGPVISRAGFYLIFIWVLILS 547


>ref|XP_002311983.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222851803|gb|EEE89350.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 565

 Score =  210 bits (535), Expect = 6e-52
 Identities = 152/455 (33%), Positives = 213/455 (46%), Gaps = 42/455 (9%)
 Frame = +2

Query: 2    VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNNVVFPKSE--------------- 136
            + +DAFVLCR+F+KSG GPKNGE YGAP IEEEWDD+ V    SE               
Sbjct: 147  IAQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWDDDEVPLLPSEEMVLTEEAPVGDDAY 206

Query: 137  ----------------FDHDCTLDGFDEYVQAQQDLAVA---TTAPNELLIGNDGEDGCN 259
                                C+L           D  +    T  P     G    +  N
Sbjct: 207  LEMNELGQVCTCIVTCVSVTCSLGSICHQTSHNFDTGITSENTALPQNFYYG----EASN 262

Query: 260  YVGNPEGSSEDDQKALIGTGQNDGILDLPDQKMFNFPEQFQMDQTPNENDYFALEDFLNP 439
            YV  P   SEDD K ++   +N     LP ++  + P Q++ D   NE +     + +N 
Sbjct: 263  YVEQPRDFSEDDLKPMLRGAENRHGPSLPAEENLDLPGQYETDAVKNEYNNAEPMNNVNA 322

Query: 440  ADDNYSAQDPVDGKLTYFDAPQNPPVTDESFVEVDE-RKPFD----ADQSPFEMLDEYIN 604
             D NY   +      +Y DA  N P ++  F+E ++   P +     D S F+ML+EY+N
Sbjct: 323  VDVNYLFDE------SYLDALNNLPQSEGLFLEANDLSNPVEPETGGDSSGFDMLEEYLN 376

Query: 605  YFDAYDNDVMLSFNASEF--GEVGVPNMVQPALIGEVHTGNEHAHLPFPEPSETNVE-GA 775
            +FDA D +  +SF+ S+    +  V N   P   G    G +       +P ET+   G 
Sbjct: 377  FFDADDEN--MSFDPSDIFASDTAVSNQQPPPQEG----GTDEVLKAIQKPLETHGNVGP 430

Query: 776  SSSEQKPVIAKTAADVQFDKGWDGSIAKQVSRMLGSISAPTAFAAELPTKNAAFGQNSAA 955
            SSS+QKP        ++FD  +     KQ S MLG I AP A A+E P+K+AA    SA 
Sbjct: 431  SSSKQKPEA------MEFDSDFKYPFIKQASHMLGKIPAPPALASEFPSKDAALRLRSA- 483

Query: 956  RSSSSVHVTAGMIHISGMTLIDNDKIWSLGKSGNADLLLPYGMTMSNVNLLSSSFEPMGN 1135
             SSSS+HVTAG+I I  M+L  N   WS GK+GN D++L +G+                 
Sbjct: 484  -SSSSIHVTAGVIRIENMSLGGNGTEWSFGKNGNVDVILSFGLPQQE------------- 529

Query: 1136 TLSSKATAVIFRSGFYFFFLWVMLLSMSCKIGSYI 1240
                 A +V+ R   +  F WV++LS+S KIG+ I
Sbjct: 530  --GGPAKSVVSRGWLFLMFFWVLILSVSYKIGTCI 562


>ref|XP_004150380.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]
            gi|449513036|ref|XP_004164210.1| PREDICTED: NAC
            domain-containing protein 78-like [Cucumis sativus]
          Length = 555

 Score =  205 bits (521), Expect = 3e-50
 Identities = 154/437 (35%), Positives = 221/437 (50%), Gaps = 22/437 (5%)
 Frame = +2

Query: 2    VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEW-DDNNVVFPKSEFDHDCTLDGFDEYV 178
            V +DA+VLCR+F+KSG GPKNGE YGAP IEEEW DD  +  P  E   +  L   D+Y+
Sbjct: 146  VVQDAYVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEELTLPGEEVVANEGLVDVDDYM 205

Query: 179  QAQQDLAVATTAPNELLIGNDG-------EDGCNYVGNPEGSSEDDQKALIGTGQNDGIL 337
              + D  +A     E L G  G       ++  N+V  P G  E+D K  +  G  D   
Sbjct: 206  HFEVD-DIAQYFDGE-LPGEYGQPPLIYPQETSNHVELPNGLVENDNKPEVCAG--DTFE 261

Query: 338  DLPDQKMFNFPEQFQMDQTPNENDYFA--------LEDFLNPADDNYSAQDPVDGKLTYF 493
              P    F  PEQ+   ++   +D FA          D  N  D NY   +P      Y 
Sbjct: 262  LQPSLNFFQLPEQYGTGESSERDDRFAESSGNLAESSDNFNQEDINYLLDEP------YP 315

Query: 494  DAPQNPPVTDESFVEV-DERKPFDADQSPFEMLDEYINYFDAYDNDVMLSFNASEFGEVG 670
              P +  + +E F+E  D   P ++D S  ++L+EY  +FDA DN + L+F+ S+  +  
Sbjct: 316  SVPDDLALNEELFLEANDLSNPVESDPSALDVLEEYFTFFDADDN-LQLAFDPSDLFDSE 374

Query: 671  VPNMVQPALIGEVHTGNEHAHLPFPEPSETNVEGASSSEQKPVIAKTAADVQFDKGWDGS 850
             P   Q     +V    E   +   + S T V  AS+S+Q P   +T++D +        
Sbjct: 375  EPISSQTTSEEKVSEVAEKEFMAAKQSSVTFVNDASTSKQDPKAIETSSDSK------SP 428

Query: 851  IAKQVSRMLGSISAPTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTL---ID 1021
              K  S MLG+I AP AFA+E P+K+ A   NSAA++SSSVHVTAGMIHI  +T    + 
Sbjct: 429  FFKGASYMLGNIPAPPAFASEYPSKDMAIRLNSAAQTSSSVHVTAGMIHIRNLTSNGDLV 488

Query: 1022 NDKIWSLGKSGNADLLLPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFL-- 1195
            ND ++  GK+ + +L+L +      V           +  S K   ++   GF FFFL  
Sbjct: 489  NDPLY--GKNADVNLILSFAQHQHQVE---------SDHQSEKNGTIVGSRGFLFFFLLF 537

Query: 1196 WVMLLSMSCKIGSYIYT 1246
            WV++LS+S K+GS IY+
Sbjct: 538  WVLILSVSFKVGSCIYS 554


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