BLASTX nr result
ID: Coptis25_contig00002591
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002591
(1673 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays] 832 0.0
gb|EEC71666.1| hypothetical protein OsI_04129 [Oryza sativa Indi... 832 0.0
ref|NP_001167651.1| uncharacterized protein LOC100381281 [Zea ma... 832 0.0
ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group] g... 831 0.0
gb|AFW79504.1| hypothetical protein ZEAMMB73_908177, partial [Ze... 831 0.0
>tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays]
Length = 488
Score = 832 bits (2149), Expect = 0.0
Identities = 406/432 (93%), Positives = 413/432 (95%)
Frame = -3
Query: 1611 AKMREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGSYVGTSELQLERVNVYYNEANGGR 1432
AKMREILHIQGGQCGNQIGAKFWEV+CDEHGID TG Y G S+LQLERVNVYYNEA+ GR
Sbjct: 41 AKMREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGR 100
Query: 1431 YVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 1252
+VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 101 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 160
Query: 1251 VVRKETENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDT 1072
VVRKE ENCDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 161 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 220
Query: 1071 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 892
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTC
Sbjct: 221 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 280
Query: 891 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDAKN 712
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+L+VPELTQQMWDAKN
Sbjct: 281 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 340
Query: 711 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 532
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP
Sbjct: 341 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 400
Query: 531 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 352
RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 401 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 460
Query: 351 VSEYQQYQDATA 316
VSEYQQYQDATA
Sbjct: 461 VSEYQQYQDATA 472
>gb|EEC71666.1| hypothetical protein OsI_04129 [Oryza sativa Indica Group]
Length = 496
Score = 832 bits (2149), Expect = 0.0
Identities = 406/432 (93%), Positives = 413/432 (95%)
Frame = -3
Query: 1611 AKMREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGSYVGTSELQLERVNVYYNEANGGR 1432
AKMREILHIQGGQCGNQIGAKFWEV+CDEHGID TG Y G S+LQLERVNVYYNEA+ GR
Sbjct: 48 AKMREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGR 107
Query: 1431 YVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 1252
+VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 108 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 167
Query: 1251 VVRKETENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDT 1072
VVRKE ENCDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 168 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 227
Query: 1071 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 892
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTC
Sbjct: 228 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 287
Query: 891 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDAKN 712
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+L+VPELTQQMWDAKN
Sbjct: 288 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 347
Query: 711 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 532
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP
Sbjct: 348 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 407
Query: 531 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 352
RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 408 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 467
Query: 351 VSEYQQYQDATA 316
VSEYQQYQDATA
Sbjct: 468 VSEYQQYQDATA 479
>ref|NP_001167651.1| uncharacterized protein LOC100381281 [Zea mays]
gi|194702760|gb|ACF85464.1| unknown [Zea mays]
gi|414880072|tpg|DAA57203.1| TPA: beta tubulin6 isoform 1
[Zea mays] gi|414880073|tpg|DAA57204.1| TPA: beta
tubulin6 isoform 2 [Zea mays]
Length = 496
Score = 832 bits (2149), Expect = 0.0
Identities = 406/432 (93%), Positives = 413/432 (95%)
Frame = -3
Query: 1611 AKMREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGSYVGTSELQLERVNVYYNEANGGR 1432
AKMREILHIQGGQCGNQIGAKFWEV+CDEHGID TG Y G S+LQLERVNVYYNEA+ GR
Sbjct: 49 AKMREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGR 108
Query: 1431 YVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 1252
+VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 109 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 168
Query: 1251 VVRKETENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDT 1072
VVRKE ENCDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 169 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 228
Query: 1071 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 892
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTC
Sbjct: 229 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 288
Query: 891 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDAKN 712
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+L+VPELTQQMWDAKN
Sbjct: 289 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 348
Query: 711 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 532
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP
Sbjct: 349 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 408
Query: 531 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 352
RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 409 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 468
Query: 351 VSEYQQYQDATA 316
VSEYQQYQDATA
Sbjct: 469 VSEYQQYQDATA 480
>ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group]
gi|74053560|sp|Q43594.2|TBB1_ORYSJ RecName: Full=Tubulin
beta-1 chain; AltName: Full=Beta-1-tubulin
gi|13486716|dbj|BAB39951.1| putative tubulin beta-4 chain
[Oryza sativa Japonica Group] gi|15408819|dbj|BAB64211.1|
putative beta-tubulin 4 [Oryza sativa Japonica Group]
gi|113532292|dbj|BAF04675.1| Os01g0282800 [Oryza sativa
Japonica Group] gi|125525429|gb|EAY73543.1| hypothetical
protein OsI_01426 [Oryza sativa Indica Group]
gi|215768577|dbj|BAH00806.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 447
Score = 831 bits (2146), Expect = 0.0
Identities = 405/430 (94%), Positives = 413/430 (96%)
Frame = -3
Query: 1605 MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGSYVGTSELQLERVNVYYNEANGGRYV 1426
MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG YVGTS+LQLERVNVYYNEA+ GR+V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 1425 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 1246
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 1245 RKETENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVV 1066
RKE ENCDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 1065 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 886
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDAKNMM 706
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+L+VPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 705 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 526
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 525 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 346
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 345 EYQQYQDATA 316
EYQQYQDATA
Sbjct: 421 EYQQYQDATA 430
>gb|AFW79504.1| hypothetical protein ZEAMMB73_908177, partial [Zea mays]
Length = 447
Score = 831 bits (2146), Expect = 0.0
Identities = 405/430 (94%), Positives = 413/430 (96%)
Frame = -3
Query: 1605 MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGSYVGTSELQLERVNVYYNEANGGRYV 1426
MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG YVGTS+LQLERVNVYYNEA+ GR+V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 1425 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 1246
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 1245 RKETENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVV 1066
RKE ENCDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 1065 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 886
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDAKNMM 706
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+L+VPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 705 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 526
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 525 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 346
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 345 EYQQYQDATA 316
EYQQYQDATA
Sbjct: 421 EYQQYQDATA 430