BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002590
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAM58984.1| beta tubulin 6 [Hordeum vulgare subsp. vulgare]       377   e-102
ref|XP_003568451.1| PREDICTED: tubulin beta-1 chain-like [Brachy...   375   e-102
ref|NP_001105426.1| tubulin beta-2 chain [Zea mays] gi|135460|sp...   374   e-101
emb|CAA10664.1| beta-tubulin 2 [Hordeum vulgare subsp. vulgare]       374   e-101
sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltNa...   374   e-101

>emb|CAM58984.1| beta tubulin 6 [Hordeum vulgare subsp. vulgare]
          Length = 445

 Score =  377 bits (968), Expect = e-102
 Identities = 194/244 (79%), Positives = 195/244 (79%)
 Frame = -3

Query: 732 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 553
           SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN
Sbjct: 188 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247

Query: 552 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRH 373
           SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSKNMMCAADPRH
Sbjct: 248 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRH 307

Query: 372 GRYLTASAMFRGKMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
           GRYLTASAMFRGKMST                                            
Sbjct: 308 GRYLTASAMFRGKMST---------------------------KEVDEQMINVQNKNSSY 340

Query: 192 XXXXXPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 13
                PNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 341 FVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400

Query: 12  EGMD 1
           EGMD
Sbjct: 401 EGMD 404


>ref|XP_003568451.1| PREDICTED: tubulin beta-1 chain-like [Brachypodium distachyon]
          Length = 444

 Score =  375 bits (964), Expect = e-102
 Identities = 193/244 (79%), Positives = 194/244 (79%)
 Frame = -3

Query: 732 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 553
           SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN
Sbjct: 188 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247

Query: 552 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRH 373
           SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSKNMMCAADPRH
Sbjct: 248 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRH 307

Query: 372 GRYLTASAMFRGKMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
           GRYLTASAMFRGKMST                                            
Sbjct: 308 GRYLTASAMFRGKMST---------------------------KEVDEQMINVQNKNSSY 340

Query: 192 XXXXXPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 13
                PNNVKSSVCDIPPRGLSM STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 341 FVEWIPNNVKSSVCDIPPRGLSMGSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400

Query: 12  EGMD 1
           EGMD
Sbjct: 401 EGMD 404


>ref|NP_001105426.1| tubulin beta-2 chain [Zea mays] gi|135460|sp|P18026.1|TBB2_MAIZE
           RecName: Full=Tubulin beta-2 chain; AltName:
           Full=Beta-2-tubulin gi|22184|emb|CAA37061.1| unnamed
           protein product [Zea mays] gi|413949279|gb|AFW81928.1|
           beta tubulin2 [Zea mays]
          Length = 444

 Score =  374 bits (960), Expect = e-101
 Identities = 192/244 (78%), Positives = 194/244 (79%)
 Frame = -3

Query: 732 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 553
           SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN
Sbjct: 188 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247

Query: 552 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRH 373
           SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRSLTVPELTQQMWDSKNMMCAADPRH
Sbjct: 248 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRH 307

Query: 372 GRYLTASAMFRGKMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
           GRYLTASAMFRGKMST                                            
Sbjct: 308 GRYLTASAMFRGKMST---------------------------KEVDEQMINVQNKNSSY 340

Query: 192 XXXXXPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 13
                PNNVKSSVCDIPPRGLSM+STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 341 FVEWIPNNVKSSVCDIPPRGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400

Query: 12  EGMD 1
           EGMD
Sbjct: 401 EGMD 404


>emb|CAA10664.1| beta-tubulin 2 [Hordeum vulgare subsp. vulgare]
          Length = 330

 Score =  374 bits (960), Expect = e-101
 Identities = 193/244 (79%), Positives = 194/244 (79%)
 Frame = -3

Query: 732 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 553
           SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN
Sbjct: 71  SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 130

Query: 552 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRH 373
           SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSKNMMCAADPRH
Sbjct: 131 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRH 190

Query: 372 GRYLTASAMFRGKMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
           GRYLTASAMFRGKMST                                            
Sbjct: 191 GRYLTASAMFRGKMST---------------------------KEVDEQMINVQNKNSSY 223

Query: 192 XXXXXPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 13
                PNNVKSSVCDI PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 224 FVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 283

Query: 12  EGMD 1
           EGMD
Sbjct: 284 EGMD 287


>sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin
           gi|4098331|gb|AAD10492.1| beta-tubulin 5 [Triticum
           aestivum] gi|146760213|emb|CAM58982.1| beta tubulin 4
           [Hordeum vulgare subsp. vulgare]
          Length = 447

 Score =  374 bits (960), Expect = e-101
 Identities = 193/244 (79%), Positives = 194/244 (79%)
 Frame = -3

Query: 732 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 553
           SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN
Sbjct: 188 SVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247

Query: 552 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRH 373
           SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSKNMMCAADPRH
Sbjct: 248 SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRH 307

Query: 372 GRYLTASAMFRGKMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
           GRYLTASAMFRGKMST                                            
Sbjct: 308 GRYLTASAMFRGKMST---------------------------KEVDEQMINVQNKNSSY 340

Query: 192 XXXXXPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 13
                PNNVKSSVCDI PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 341 FVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400

Query: 12  EGMD 1
           EGMD
Sbjct: 401 EGMD 404