BLASTX nr result
ID: Coptis25_contig00002587
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002587 (891 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucu... 201 2e-49 ref|XP_002316965.1| histone H2 [Populus trichocarpa] gi|22286003... 196 6e-48 gb|ABK94182.1| unknown [Populus trichocarpa] 196 6e-48 ref|XP_002282795.1| PREDICTED: histone H2A.6 isoform 1 [Vitis vi... 196 6e-48 ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vin... 195 1e-47 >ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucumis sativus] gi|449522341|ref|XP_004168185.1| PREDICTED: probable histone H2A.1-like [Cucumis sativus] Length = 135 Score = 201 bits (510), Expect = 2e-49 Identities = 107/134 (79%), Positives = 110/134 (82%), Gaps = 1/134 (0%) Frame = +3 Query: 279 MAGRGKTLGSGA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 455 MAGRGKTLGSGA KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MAGRGKTLGSGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60 Query: 456 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHNLLLPK 635 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGVMPNIHNLLLPK Sbjct: 61 AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120 Query: 636 KTSTKAASSAGDDE 677 KT T + ++ GDDE Sbjct: 121 KTGTSSKNAGGDDE 134 >ref|XP_002316965.1| histone H2 [Populus trichocarpa] gi|222860030|gb|EEE97577.1| histone H2 [Populus trichocarpa] Length = 133 Score = 196 bits (498), Expect = 6e-48 Identities = 106/133 (79%), Positives = 108/133 (81%), Gaps = 1/133 (0%) Frame = +3 Query: 279 MAGRGKTLGSG-AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 455 MAGRGKTLGSG AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MAGRGKTLGSGTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60 Query: 456 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHNLLLPK 635 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGVMPNIHNLLLPK Sbjct: 61 AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120 Query: 636 KTSTKAASSAGDD 674 KT + +SA DD Sbjct: 121 KTGGSSKASADDD 133 >gb|ABK94182.1| unknown [Populus trichocarpa] Length = 134 Score = 196 bits (498), Expect = 6e-48 Identities = 106/133 (79%), Positives = 108/133 (81%), Gaps = 1/133 (0%) Frame = +3 Query: 279 MAGRGKTLGSG-AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 455 MAGRGKTLGSG AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MAGRGKTLGSGTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60 Query: 456 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHNLLLPK 635 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGVMPNIHNLLLPK Sbjct: 61 AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120 Query: 636 KTSTKAASSAGDD 674 KT + +SA DD Sbjct: 121 KTGGSSKASADDD 133 >ref|XP_002282795.1| PREDICTED: histone H2A.6 isoform 1 [Vitis vinifera] gi|302143197|emb|CBI20492.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 196 bits (498), Expect = 6e-48 Identities = 105/134 (78%), Positives = 108/134 (80%), Gaps = 1/134 (0%) Frame = +3 Query: 279 MAGRGKTLGSGA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 455 MAGRGKTLGSGA KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MAGRGKTLGSGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60 Query: 456 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHNLLLPK 635 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGVMPNIHNLLLPK Sbjct: 61 AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120 Query: 636 KTSTKAASSAGDDE 677 K + +S GDD+ Sbjct: 121 KAGGSSKASGGDDD 134 >ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vinifera] gi|296086995|emb|CBI33257.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 195 bits (495), Expect = 1e-47 Identities = 103/134 (76%), Positives = 110/134 (82%), Gaps = 1/134 (0%) Frame = +3 Query: 279 MAGRGKTLGSGA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 455 MAGRGK+LG+GA KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MAGRGKSLGAGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60 Query: 456 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHNLLLPK 635 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLG+VTIANGGVMPNIHNLLLPK Sbjct: 61 AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVMPNIHNLLLPK 120 Query: 636 KTSTKAASSAGDDE 677 K+S+ +A DD+ Sbjct: 121 KSSSSKGGAAADDD 134